Array 1 16588-17415 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVFE01000013.1 Streptococcus agalactiae strain V87 SV87_Contig01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 16588 36 100.0 30 .................................... ACGAGCTAACGGTTACCTAATCAGTCGCCG 16654 36 100.0 30 .................................... TATCGATATTGATGATTTAACATCAATTAT 16720 36 100.0 30 .................................... TTAATTAAGGTATTTATACCACCTTTTTGT 16786 36 100.0 30 .................................... AGAGTGTGTCCAAGACCAGAGTTACTGTTT 16852 36 100.0 30 .................................... CTATTGGTTAGAATTTTTTTACAGGAAGAA 16918 36 100.0 30 .................................... TGCTAAAAGGTAAATTTAACATTCCAGGTA 16984 36 100.0 30 .................................... TGTTTTAATCATCCAAAATATGTTGCTTAA 17050 36 100.0 30 .................................... TCATCTGGTGTAACTTGTTCGGCCATCATC 17116 36 100.0 30 .................................... TCTAAAATCAAGGAACTGAGAAAAAATAAA 17182 36 100.0 30 .................................... TATTTGATAGCGGTAACGGGTCATATACAA 17248 36 100.0 30 .................................... TGGTGGTATTTATAATGTACGAGCAAATCG 17314 36 100.0 30 .................................... GATAAAAAGTGGGAGCTGAATTAAAAGGCA 17380 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATCACGATTTTAGAACTCATTAAGGCACTAGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CATTTGAACGATTTTTATATTCCTGATATGTGTTTTAGAGCTGTGCGGTTATTATGCTAGGGCACCGTTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAGTTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTATTTTTCGGATTCAAAGAGAATGTGTCGATAGAAGAGATACGAAAGACTATAATTCCAACCTTATGGTTAAAGGGCTAGATTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTCTTTGTCACTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //