Array 1 14248-14860 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBNB01000012.1 Clostridium tetani ATCC 454 ct454_454contig00029, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 14248 29 100.0 36 ............................. ACTTGTTAGGGGGACAGAGAAGATATTAAAAGAAAT 14313 29 100.0 36 ............................. AGGAGCATGTCTACTCTACACATCTTTAGTTCCTCG 14378 29 100.0 38 ............................. CCCATTAGTTCAACATAATCTACAGTATTCCAATTTAG 14445 29 100.0 33 ............................. ACAGCGGATGCAGTTATGCAACAAAATAGTTTG 14507 29 100.0 35 ............................. AACAACTAAGTCACAAGAAGATTTACAAGACTTGG 14571 29 100.0 37 ............................. CCAAAAGGATTCCTTTCTGTTTTAACTGCCCCTCTAG 14637 29 100.0 35 ............................. TTTCTTCTTGGCTAAAACCTAAAATTGTCCATTTG 14701 29 100.0 35 ............................. AATAAAACTATTAGCCGAGATAAAAAAAGAGCCAG 14765 29 100.0 36 ............................. TTATTTTATCTGCGGTTTGAGTTAACGAGCTGCTAG 14830 29 93.1 0 .......................A.C... | CC [14855] ========== ====== ====== ====== ============================= ====================================== ================== 10 29 99.3 36 TTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AATTTTAATTTAATATCGAACCACCTTAAATTAATGCCCGAAAACCTTCGAGATAAACAACGGAAGTTTTCAGGCATTTACTACAAATATAATATTTTAGATGCAGAGGACAATTTAGTTTTAATGCTTGAAGGGAATTTTACAATAGTTTCTTGGATGACTACCTGCTCTATCTTTAAAGTTGGAGTAAAGAGCATTTACGTCTCCGGATAACGATTTCTAAGCTTTAGATGGAGTAAAAACTTTCTCTAAAGCTTAAAACTCTATTTATAAAAATAATCATATATTTATAATGTTATGTGATAAAATATAGACAAAAGTTTTCCCAGGTAATTTTAAATAAGAATGTAGCCTAAGGTATTGATTTAAAAGGGTTTATACCCTGTTTTTTAATGTGATTTTCCAAAAGTCAAATCGCCTGGTAAATTTTTAATGAAACCTTGAAATATCAATGGGTTTGTGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTAGT # Right flank : TTATTTCCAAATATCTTATTCTATCAGCGTCTTATCACCGGGCAGTTCAGTATAACAGTAAAAGGATATGATGGATTTATAGCAGAGTAATGTTAGAGGTAGTTTTTAGCTTAGGCTAGGAGCTATCTCTTTTTTATTATTGTAAAATATCTAATAATGTAATAAATATTTACATCTGATCCTATATTGTACTATAATGTAAATAACATTGCGAAATAGGGGGGATTTAAATGAAAGCTTTAACTAATATAGGTAAAATGCTTGCAATATTAATAATTTTATCCATAATAATAACCATATCACCAAAGCTTGGGTCTATAGTATTTATGATAGTTCCAATAATATATTTAATCTATCTATTCAAGAAAGAATCTAAGTTTAAGAATTATAACTTTTTACTAAAAGGATTAATTAGCTCTTTTTTAGTATTAGTTTCTATTACAGGAATTGGAGGAGTTTTTTCTGAATTTAAAGAAGAAGATAGTAAGTGGAAACAAGTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 38395-38750 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBNB01000055.1 Clostridium tetani ATCC 454 ct454_454contig00072, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 38395 30 100.0 35 .............................. CTAGCATTTATAACGCCTTCTATTAGAAAAGCTAA 38460 30 100.0 35 .............................. TGGATAAAATTAGAATTATTCTTATAGCTGGATCC 38525 30 100.0 36 .............................. CCTGAGGAATTTAGGAAGGCTGAATGTAGTTTTAAA 38591 30 96.7 34 ............................T. TTTAAAAAAGGTTTAGATGAAATATTTGATTTGC 38655 30 100.0 36 .............................. CCTGATTATATTATATATCTTTTTCTTTATATTTTT 38721 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 99.5 35 GTATTAGTAGCACCATATTGGAATGTAAAT # Left flank : AAGAATATGAACCATTTAAAATATGGTGGTAGGAGAGATTTAAATGTATGTTATATTAGTTTATGATATAAAAAGTGGTGAGGAGGGGCAGAGAGTTTTAAATAGAACTTTTAAGGTATGTAAAAAATATTTGTCCCATATTCAAAACTCAGTATTTGAAGGAGAATTAGCAGAGTCACAAATAATTAAACTAAAATATGAATTAGATGATATAATAAGAAAAGATAAAGATTCTGTAATATTATTCAAAAGTAGAAATAAAAGATGGTTAACTAAAGATATGTGGGGTAAAAAAGAAGATAGAACCAGTAACTTTATTTGATTGTCTACCTAAGATGATGTTAAAATATAAGGGAGTAGACAATTATAGTTATATTAATGGTTTATAAATTATTTAACATAACTTGTATTATAATAATAGACTATAAGAAATCCCAACTTAGTAGGTAGACAGAAATAGAAGTTATACTATAGACATATAGTGCATCATAGATGAACGT # Right flank : TATAACTGTAGATTTTAGATAAAATAGGTATAAATTGTATCAGTAACACTATTCGTAACAATCAAAACAACTATATATATTAGTTGGATACTGATACCCTAAGAAATAGTAAGCACTTTATTTTTTAATGTTAAATGAAAATGGGTATAATGTTAGATTCTATGAAGTTTATGAGTATTTTAGTAATATTACTATTTCAAATGTTATTAAAACCTTTTTACAATGTTTTGTATATCTTATGTTTATTATGTATAATTTAACCGAGGTTATTTAAATAAAGAAGAAATAGATATGAAGAAAAGTTTATTTTATAACATAACATGGATGGAATATTATCCATGATAAAATCATTAGTAATTACACATTTTTAATCTATATAATTATAAAACCAACATTGGATAGAACTTTATCCAATGTTGGCTTTTCAATAAAATATAAGACTTTCTGATACAGGTAAGAAAATCCTCCATAATTCCTAACTTTTAGTTATTCATTGATTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAGTAGCACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 36312-36985 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBNB01000025.1 Clostridium tetani ATCC 454 ct454_454contig00030, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 36312 30 100.0 32 .............................. ATTATATAAATTAGGGTACTACTCTAAATGTC 36374 30 100.0 35 .............................. TATATTAGATCCTACACTAGTAATTCCTATAATAG 36439 30 100.0 36 .............................. ATAAATTAATAGATTCGGCAGATGTTGCTGGAAATA 36505 30 100.0 34 .............................. TTAGCAAACTCTAATATTTCATCATCACTTAATT 36569 30 100.0 35 .............................. TTGTTAGATGGAGGTTATGTATATATGTCGGCTAC 36634 30 100.0 34 .............................. TGTATATCCTGGAATGTAGCATATTTACATTCCC 36698 30 100.0 34 .............................. TTCTTTTCTATTGCTCTAGCTATTCTTCGCCAGC 36762 30 100.0 35 .............................. TTGAAGCTTTTTACTCTTTTAAATGTACAGATACA 36827 30 100.0 35 .............................. ACAAATGAAAATAATAATAATGAATGGGAAAAAGA 36892 30 100.0 34 .............................. TCCCTAGTTAGGAAGTGGAAAAGCCAGGATAAAT 36956 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ==================================== ================== 11 30 99.7 34 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : TACTTGTTAAACAAGTTGAAACTTATCAAAGTAGAAGACTAGAAGTTGCAAAAAGTATAGTGGAGGCTATTGGAGGTAATATATACGAGCTGTTATATCATTATTATAAACATGATAAAAAATCATAGCAAAATAAACTTGAAAAAAGCCAATGATATAAAACAAATAATGCAAGTGGAAGGGGAAACTTGGCAAAGATTTTATGGCGAATTTAAAAATATACTTCCAGAGGAATTCGTTATGAATAATAAAGTTTATGATGAAGAAATATTAGGAAATCCATACAGTTGTACAGGGGAAAACTTGATATTATAAATAAAAGTTTTACCAGGTGATTTTAAATAGGAATATGCTCTAATATATTGATTTATAAGGGTTTATATCCTATTTTGAAATGTAGTTTTTCAAAAGTTAAATCGCCTGGTAAATTTCTATGGAAATGTTGAAATATCAATGGTTTTATGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : ATATATATTAAAAAAACTTAGCCATGTCTTTTAAACCCATGATTATTCTGTCTTAATATCTTGTTCTATGGTAATATAATAGGGTAAGGAGAGTGAAAGTTATATGAAAAAAAGATTTAATGTAACTGGAACCTGTATACCAGAAAGACACTATATGGTAGATATATCTAATAAATTAGATAGCATATTAAAATTAGTAAATAATGAAGAATATTTTATTATAAATAGACCAAGACAGTATGGGAAAACCACTACTTTATATTTGTTAGAGAAAAGACTAAATCATATGAAAGAATACTTGCCTATAAAAATAAGTTTTGAAGCTATAGATACAGAGGGATATAGTAAAGTTGAAAAATTTTTAAGTAGTATAATGATGCAAATAGTGAACTATTTTAGATTTTCAACCAATAAAGAAATGTATAAATTCATAAAAAATTGTGAAAATCAAATTACTAATATGAATGATTTTAATAGTTTTATAACAGATTTAGTTGAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 38960-39386 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBNB01000025.1 Clostridium tetani ATCC 454 ct454_454contig00030, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 38960 30 100.0 37 .............................. TAACCTTGTACTTTCTATTTCCATCAATATGTATGTA 39027 30 100.0 36 .............................. TCTAATGCCGTTTGTGCATCTTCATCTTCTGATGTA 39093 30 100.0 36 .............................. GAGGTAATATGCATCAGTGCATTTTGTAATGTGCTG 39159 30 96.7 35 A............................. AGGAAGATAATTTTGTAGTGTATAGTGCAATACCT 39224 30 100.0 36 .............................. TTGGCTGCATATTGTCAAGCTTACCATAGGTGGGTG 39290 30 100.0 37 .............................. AGGATTATTGGCAATACTAGTTATAATAGGAGATATC 39357 29 86.7 0 ...A............T.-..........A | T [39371] ========== ====== ====== ====== ============================== ===================================== ================== 7 30 97.6 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AAATGTATATACTAGAACTTAAAATATGGAGAGGGGAAGAATATCACAAAAAAGGACTAAAACAGCTTGGGGAATACTTAAATCAGTACGGATTAGAAGAAGGTTATCTTTTAATATTTGATTTTAGAAAAGATACAAATTTAATAGGTAAAACTAAAGAAACCCATATAAATGCAGAAGATAATATTAAAAAGATAATAGAGGTTTATTGCTAAGATTAGTTATATAAAAAAGAAATAGAATAATAAACTAAAAGCTCTCACATGATGGGAGCTTTTAGTTTTTTAACTTATAGTGTTATGTGATAAAATATAAATAAAAGTTTTCCCAGGTGACTTCAAATGGAAGTATAGCTTAGAGTGTTGATTTATAAGAGCTTACATACTATTTTTAAATGTAATTTTTCAAAAGTTAAATCGCCTGGTAAATTTTTATGGAAATGTTGAAATATCAATGGTTTTATTGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : AATAGTTTAAATTGTAATAGTATACTTAACCATAACATGAGATGTTTAATAAAATAATATTATGGAAAAGAGATTTATATTTTAGATCTAATTATTAAATTCAATAGTATAAATTGTAATACTCTTAGAAATAATATATGTATAATCACAATAAAATAAATATAAAAAATAATGTTAATGTACTATTATGGAAACAAAAGGATGGATAAAAATGAAGAAAAAATTAAAATTCTCTATTTCAGCAACTTATGAAGATTTAAAAGAAAAAGAAAGGATAGAAATTGATGATATCATTTATATAATTGAATTAGTTTCAGTTATTACATTAATTTTAAAAATCTTTCAATTCATAAATTAAAAGATATATTTTTTTTAAATCCTTTATACTATAGAAATATAATTAGTGTTATAATATGGAATAATATAAAATATTATGGTAAAATATATATTATAATGAAGATATAAGGAGGTGAAAAAGTGAAAATATATGAATTAACATT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 48691-49369 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBNB01000025.1 Clostridium tetani ATCC 454 ct454_454contig00030, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 48691 30 96.7 35 .C............................ GTTATCCAACCTAAATGGATATGTTGGGATAAGGA 48756 30 100.0 35 .............................. GTGTATTTAAATACAAGTGATAGCGAAGTGAAAAA 48821 30 100.0 35 .............................. AATAATCTAATAGGTGGAGAACAATACGCAAGTGG 48886 30 100.0 34 .............................. GATGCATTAAAAGAGGCTAAGGGCAAATTAAAAA 48950 30 100.0 36 .............................. AAAGTTGAATCTTGCCAATATACAAAGTCAACAAGC 49016 30 100.0 34 .............................. TGGTTTAAATCCCCTACATACTGTACTAGTCCCT 49080 30 100.0 36 .............................. TTGAATTTATGATTTTTGTTTAATATAAAATTAATA 49146 30 100.0 34 .............................. CTCATTGGAGCTTATTGGAGTAAAAAAGAAATAT 49210 30 100.0 36 .............................. TCAAAATTCTGTAGCAATCGAAGAATATATACAGTT 49276 30 100.0 34 .............................. GTAGCTCCATCCATCTGCTTTATTTCTTCTATAA 49340 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ==================================== ================== 11 30 99.4 35 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : TTTAGTTTAAAGGAGAGAATGTAGATGAGTAAAAATTTTAATTATAATTATGCATTTGTTTTTTATGATGTTAATGAAAAAAGAGTAAATAGAGTGTTCAAAACCTGTAAAAAGTATTTGTCACATTTTCAAAAATCTGTATTTAGGGGAGAACTTACACCAGCAAATTTTATATTATTAAAAAAAGATTTAAATAAAGTAATAAATGAAGATGAAGATTTTATATGTATAATAAAACTTATGAATAATAAAGTTTATGATGAAGAAATATTAGGAAATCCACACAGTTGTACAGGGGAAGACTTGATATTATAAATAAAAGTTTTACCAGGTGATTTTAAATAGGAATATGCTGTAAGATATTGATTTATAAGGGGTTATATCCTATTTTGAAATGTAGTTTTTCAAAAGTTAAATCGCCTGGTAAATTTTTATGGAAATGTTGAAATATCAATGGTTTTATGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : ATATACATTAAAAAAACTTAGCCATGTCTTTTAAACCCATGATTATTCTGTCTAAATATCTTATTCTATGCTAATATAATAGGGTGAGGAGAGTGAAAGTTATATGAAAAAAAGATTTAATGTAACTGGAACCTGTATACCAGAAAGACACTATATGGTAGATATATCTAATAAACTAGATAGTATATTAAAATTGGTAAATAATGAAGAATATTTTATTATAAATAGACCAAGGCAGTATGGAAAAACCACTACTTTATACATGCTTGAAAGATATTTAAATAAGTTTAAGGATTATTTAGTCATTTCTATAAGTTTTGAAGGGATTGGGGATTTAATTTTTCAAGATGAGAAGGTATTTTCAAAGGAATTTTTACAGATAATGTCTGATTCTCTTTTACTAAATAGCCAGGCATTGTCTGAGTGTTTAGAGGAACAAAAGCCACATGTAGAAAACTTTATTGACTTATCAAGAGTTATAACCAAGTTTATTGTGAAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 4 55670-56088 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBNB01000025.1 Clostridium tetani ATCC 454 ct454_454contig00030, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 55670 30 100.0 35 .............................. AGTAATAACTAGAGAGGACATTGTTAATAAGATAT 55735 30 100.0 34 .............................. ACAAGTTACAGTTAAAACAGGGGTAGCAAGTGTG 55799 30 100.0 36 .............................. TGCCTTTTATATAATGTCTGTAATGCACTTATCTCC 55865 30 100.0 35 .............................. ATAGATAATGGTTCATAACCTACTACATCCATTTC 55930 30 100.0 35 .............................. CTTTTAGAAGAAGTAAAGAAATGGTTACTTTCAGG 55995 30 100.0 34 .............................. TTTTTTTTATTTCTGTTTTATATTCTACGCCTGT 56059 30 93.3 0 .........................C.C.. | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 99.0 35 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : ATAAACCCTTTTAGAAATGAAGTGGTTTTAGGAAATCTAGATGATCTTTTAAATACAGAACTTATAGCTAAAGATGTAAATTATATACCTTTTGATAATTTAAAAGAGCCAATGGAAGTTGAAGCTAAAATAAGATATTCTCAAATTCCTTCAAAGGCAGTAATAACACCTATGGAAAATGATAAAGTAAAGGTGAACTTTACTGAAAAGCAAAGAGCCATAACTAAAGGTCAATCTGTGGTTTTTTATAAAGGTGATTTATTAATAGGCGGAGGAATAATTGAATAAAGTTTCTTTTAATACTTATATATAAAGTAATATTATTTACCAGGTGATTTTAATTGATTACATGCTTTAAGGCATTGATTTAACAGGGATTGATTAATGTTTAAAGGAAGCATTTTAAAAAAGCTAAATCGCCTGGTAAATTTTTAACGAAACCTTGAAATATCAATGGGTTTATGATATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : TAGTGACTAACTACAATTTACTGCATTAGTTACCATTTTGTTATTGTTATAAATATATTGGTACGAATAAAAACTAAATATAAAATTGAAAAATAAGGAGTCTTCTAAATTTAGACTCCTTATTTTTCATGGTATATGCTGTAAATTATTATGTAAAAATGTTATATTTTAATAACATATGGTACAATATAGAATAACAGAAACGTTTTGGTTATATGAAAAGTTTATAGAGTGATACTTGGGAACTTAAAATTTTTAAATTAAATATGTAAGGGGGATTTTAATGCATATATCTCATAAAGCTCTTTTGTATAGTTTTTTACGATATGTTGAATCTATTGATGAGAAACTATACAAGAAAAGTAGTTTAAGTATAAAAGATAGATTTTTAGATCAAATATTACAAGAATCATATGAACTAGTAACACAAAATATACAGATAAAAGCGAATAAAAGTGGCACTTTTAGATTAATGAATATATTTTCTAATATAGATGGTG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 5 67866-68284 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBNB01000025.1 Clostridium tetani ATCC 454 ct454_454contig00030, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 67866 30 100.0 35 .............................. GTTATGCTGCAACTATGTGCTATGGTTGCAAGAAA 67931 30 100.0 34 .............................. TCCCTTTCTTTTTGGCATAATAAAAAACTAGCTA 67995 30 100.0 36 .............................. TTTATATTTGGATTAACAGTTGTTAATTTAGCACCA 68061 30 100.0 34 .............................. TAATATTTAAGTTTTTCTCGAACCTCTGCAAAAC 68125 30 100.0 34 .............................. AAAAATAAAAAAAGAGGTAGCTCCTAGCCTAAGC 68189 30 100.0 36 .............................. TGCCTTCCTCTAAGTAACTAAACAATTCATTTATCT 68255 30 90.0 0 ............T...............TA | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 98.6 35 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : TGTGAGCTTTTCTTTTAAAAAACTTAACGGTGTATGGCAGCTTTTACTATTGGACTCTAAAAAAGACGATGAAATAACGATAATTAATAACTCTAAAATAGATGAGGGAAAATTGTATATTGGAGTTTTAAATTCTGAGAATGAGATTATTGCTTTTGATAAAGAAAAGCAAGACAAAATAACATTTGTAACTCCTGAAGAGGGATGCTATCTCATTAGGATTTTAGCTAAAAACTCTAGTGGAAAATGTGATGTGAAAGTAGATTCTAAAAAAGGTATAGATCTTAATTACAATTCTATTAATGGGCATAATATGGGTTTACTAGAGAAAAATAATTGAATAAATTTTATATATAAAGTAATATTATTTACCAGGTGATTTTAATTGATTACATGCTTTAAAGCATTGATTTAACAGGGAGTGATTAATGTTTAAAGGGAGCATTTTAAAAAAGCTAAATCGCCTGGTAAATTTTTAATGAAACCTTGATTTTACAGTG # Right flank : AAACTAAGCGAAACTATTAAAAACAGGAAGTGGAAAAATGTGGTACTTGAATTTACTGCCAATTCTTAATTTCAAAAAAACTCCTTTATAATAATATTGTAATATTGAAATATTATTGGTATAATACACTCAAGTAAAGTTTATTATAAACTTATTTTGATTGTTATAATTGTGGGTTAATTTTATATTTAAGCTAAAGAATTACTAATTCATTCATATCTTAATACTTTTAAAATAGGAGAATGTGTATATGAAAGAATTTAGTATTAATACAGATGTTTATTTTGGAGAAGGCTCTTTAGATAGACTAAATGAAATTAAAAATAAAAGAGTACTAATTGTATGCGATAAGTTTATGGAAACTTCAGGTATGGTTACAAAAGTACAACAAAAGCTTACTGACTGTGAAGTAACCATATACAGTGATATTGTTCCTGACCCATCTGTAGAAGTTATTGCATCTGGTATTCAAAAATTACAGAGTTGTAATGCACAGATTA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //