Array 1 25415-22795 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXAH010000003.1 Hazenella sp. IB182357 Contig_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================================================================================== ================== 25414 30 100.0 38 .............................. GATTATACGCCTATTGTTGATGTTCGTAGGGTTAAGCC 25346 30 100.0 36 .............................. TATCTCTCAAAACGCCACCGTAAGCAATCAATCTAC 25280 30 100.0 36 .............................. TGCTGTGTTGGGATCTAGTTTGATATTGGATGGTAC 25214 30 100.0 37 .............................. AATGTCGGATATGATAGCTCTGGTGTTGTCAGATATG 25147 30 100.0 35 .............................. ATAAATCAGTGGCAAACGACACGAGACTATCGTGG 25082 30 100.0 39 .............................. ACAAGAGCCTTTACCGCAACCGGTTTCTCGCTAATGGGC 25013 30 100.0 36 .............................. GTCGATCATAGCGGGGAAGCTTTCTACCCGATTCGT 24947 30 100.0 35 .............................. ATTGTAGTAGATGAGTTACACCAAATCATTAACCA 24882 30 100.0 36 .............................. TCGCTCCTTTCAGTCACAAGGTAATTCAATCCCATA 24816 30 100.0 39 .............................. CATCTGCATCCTCCATCAGTTCTAACATTTCCGTAACTC 24747 30 100.0 36 .............................. TGTAGATTTCAAGCGTGCAGTAGAGAAGGCACTTGC 24681 30 100.0 35 .............................. CACATCACCCTATCCACATAGAGAGACAGATAATG 24616 30 100.0 38 .............................. TGCCGTGAGTAATAGACATAGTATCAAGACAAGGAAAG 24548 30 100.0 37 .............................. TTAGTCAGTAAAGGTATGTTGCTTGGGCAGGTTGCAC 24481 30 100.0 36 .............................. CGGAAATCTTTTTAAAAAAAGAGAAATTCTTCATGA 24415 30 100.0 36 .............................. TCACCTAATTTAAAATGTCATAGTCCATGACTTTTC 24349 30 100.0 35 .............................. AAATTCATTTCAAATAGTTCGATTGATGATACATC 24284 30 100.0 35 .............................. GAAAAAGCCTATTCACATTGTAGCATAGTGGAGAG 24219 30 100.0 35 .............................. AAATTAAACGTCATCTATAGCTTGGTTTCTGTTTT 24154 30 100.0 38 .............................. AATGAAACAACGTTGGTGTTTGGTTCTGACGTGTCTAC 24086 30 100.0 34 .............................. GAACTAACAACCGTATTCTTAGGAAGCTCAATAT 24022 30 100.0 34 .............................. AGATCTATATAGATAGTCCTGCGAAACCTGCTTC 23958 30 100.0 35 .............................. TAGAATTGATTCAAGAAGTGGACGAGGAAAACGTA 23893 30 100.0 35 .............................. TTATCTTCTAGCAATGACTTGATAGCGACTGCTCC 23828 30 100.0 35 .............................. CTTTCCTTTCTCTGCTTGGCTGGAAAACATTCTAC 23763 30 100.0 37 .............................. AGGATGTGGCTGCATGAAAAAGCATAAATGGATTTTG 23696 30 100.0 36 .............................. AGATCCCGCTTCACTATTAGGATTTCGGGAGTTTCA 23630 30 100.0 38 .............................. CTTTAACCCCTTTATCCTCTAAGTAGTACATGCTGTAC 23562 30 100.0 37 .............................. GTTTCGACTTCTGCTTGCTCGGTATTCCGTCGATATA 23495 30 100.0 36 .............................. TGGCAATGAGTGCGCAACATGAAATGTTGATGGTTA 23429 30 100.0 37 .............................. CGTATGTGAACCGGTCACGAGGAAAGCCCATATATAT 23362 30 100.0 36 .............................. AATTGACTGCTGGTTATATCGCTAATCGGTATCATA 23296 30 100.0 37 .............................. CCTACCTCCGAAGTCATCAATGATTTGTTGCAGTGGC 23229 30 100.0 38 .............................. TGAGATATTGGTCAGAGTGGCTATAGTTACCCCAAGTA 23161 30 100.0 36 .............................. GCTAAATATGATAAAAGCTACAATTCCGAGAAATAA 23095 30 100.0 36 .............................. AAAAACTATACGGTCACCGTTCAAAAAATTAAACCC 23029 30 96.7 45 .................A............ TAACATCAACAGGCGGTCTAGTACCGCCTCCCTTGGAGGGGTTAA 22954 30 96.7 100 T............................. TCTTTCCACATGTTCCCCTCTCCTTTTTATTAGCCCGTTTCCATCAAACCCAAGCATTTGAAACTCCTTGTTTGGCTTCTTGTTTGATTCCAAGTTCCAA 22824 30 76.7 0 .................A.A.....AGGCT | ========== ====== ====== ====== ============================== ==================================================================================================== ================== 39 30 99.2 38 GTTTCCATCGTACCTATGAGGATTTGAAAC # Left flank : AGACAGGTTGATGTTCAAATCTGTCTATCCTTTGCTATAGCATGAGTGAAAAGTATCCCAAGACGTCACTTCATCTATCGGTATCCTATTTTTGGGAAACCAGCTTGTGTCGCTTTTCCGAGTGCAATTAACAGAACAGGTTCATAGCTAGCTGGTACATGAAATGCTTCCACAAATTGAGAAGCATCATATCCCACATCTATCATTCCAATTCGGATTAAATCAGTGGGGGATAAATTGCCATATGTCTTATAAACCTGATTGACATAACGGCTTTTTCCCTCTATCGTATGATCACCTTATGGTGCAAAAAATAAGGTAGAGATATCCATAGATGTCGTCGACCTCCAATAGCGTAGTAAACCCCGGAGATCGACGACAACACCTCACCACCACAACTCCGCAATATCCCTAGCCTAAGCAATATTCACCCGAAAAAGAGTAGATTATTTGTTGAATTTGGTTAATAATAGATATAAGGCATACTCCTACTTTTTGGG # Right flank : TAAATTATAAAGAAACCCCGTATGACATCTAGTTCTAGAACTAGATGTCATACGGGGTTATCTTATTTTCACTTCCACTTTCGTTTAAAGCGACCATAGCCAACCGCTGTTTTTGCACCTGCCCCGATTTCAATGAGGGCATCTTTTAACCATGCGCTCACTTGGCGTACATCGGCATGAGCGTTATCGTTTTGATATCCCGGACGTGGCGCAAATGCGAAGCAGAAGGTTTGTCCTGCCGCAACCGTTAAGAAGGGAATTAGAATGGGATCATACCATTCGACAGCTTTATTTTGGTTTGGTTTATCATAGTATGGAGAGAAGTGCGGGGTCATGATATCTGCTTCTAGTTTCACAGCCCCCTCAGGAAGTGCATCAAAAAAGATCATGCTTCCTGTTTGGGCGCTAAATCGAAGATTGGAAGGAATGTCTCCTCTGCTTCAATTTTCTCTTTTAATGCTAATTCCTCCATTTGCTCTAGTGCCCAAGCACGCACAATC # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.13, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCGTACCTATGAGGATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 24356-26509 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXAH010000026.1 Hazenella sp. IB182357 Contig_26, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 24356 30 100.0 36 .............................. GCAGTTCCTGACTTCGGGACTGATGCCCAAAGTCAG 24422 30 100.0 37 .............................. AATTGACTTAGAAACCGCTTGAATCGTTCTTCTATTG 24489 30 100.0 37 .............................. TACCGCCTCCTTAGACCGTGAACGCTTCTAAAATCTG 24556 30 100.0 37 .............................. CAGAATCGTAGATTGATTGCTTACGGTGGCGTTTTGA 24623 30 100.0 35 .............................. AGGCAATTGTATGAGATTGGTGGTTTTTCGATTAA 24688 30 100.0 35 .............................. TCAGTTTTCTATTTGAAGGTTGGATGACGAAATAG 24753 30 100.0 36 .............................. TCATGAAAAAGCGAGAAGCGTAGGTAAACAAAGGGA 24819 30 96.7 38 .............................A CTTTTTGGTAGGAGATGGGCCAGGAAAAAAGTTAGAAA 24887 30 100.0 36 .............................. TTGAGGATCTAGAAGAACGTAAGCGTATCAAGGCGA 24953 30 100.0 37 .............................. ACTCCTTTACTTGCTCAAAAAGGAGAGCGACACATTG 25020 30 100.0 36 .............................. AAACGCCTGTAAGACCGCTTGTGATGAATGGATCTT 25086 30 100.0 36 .............................. CATCTTCCGATTTTCTACAATCTCGTTCTACCCATC 25152 30 100.0 37 .............................. TGTAACTCTTGAGCCATATTTTGAAGCTTTTCCATCA 25219 30 100.0 38 .............................. CACACAGTGGGTAGTAGTTCAAGTCTAACTGAGGCAAA 25287 30 100.0 36 .............................. TCGGCAATCCAGTTCCTAATGTCAATTGCGCTTCGA 25353 30 100.0 36 .............................. GTACTATCAAAAATCATTTTCAACCGCTCAGGATTT 25419 30 100.0 36 .............................. ACTCTTTCATGACTCTTTGGTGTAACACAAATTCTT 25485 30 100.0 38 .............................. TTGTTGGGGGTACAGGGAGCGGTAAGACTGCAATTGCA 25553 30 100.0 37 .............................. TTTGTTTGTGTTCGTCTGGGTTAGGTTTCGGATCATC 25620 30 100.0 36 .............................. ATTTTTTCTCCTTCTGTTACCTTGGCGAATGTGCTG 25686 30 100.0 35 .............................. GTTGGTTTGAGGACTTGGAGGAAAGAGAATTTGAA 25751 30 96.7 37 .....................G........ TTTTGTTTAGCTTTGTTGATGCATCGTTGACATATGA 25818 30 100.0 36 .............................. ACCTTAATATGATTGAGCCTTAGTAAGACATATTAA 25884 30 100.0 36 .............................. AGGATAGAGCTTGAGGATGAAAGACACAAAGAATTG 25950 30 100.0 36 .............................. ATTTTTCTTCTACGGATAATCCGCTATACCCGTATG 26016 30 100.0 36 .............................. ATATTGGACTTCTTAAACATTCAAAAAAGCCCCTAG 26082 30 100.0 36 .............................. TGCGGGTATTTCATGACTCATTACACACTAGACAAA 26148 30 100.0 36 .............................. TGGACATAGTCCCGAGTTACCTTGAAACCTTTTTGG 26214 30 100.0 38 .............................. TTGTCATGCACTTCTTCTGTTTTCTTGCTCGTTTTAGA 26282 30 100.0 36 .............................. AACGCTAAATCATCTAAACTTATTTTGTTAGAACAG 26348 30 100.0 37 .............................. AATACTCCTCATACGGAACATTTTGCCGAAAGGATAG 26415 30 100.0 35 .............................. TCTTGTCGTTTGTATACCAAATGCGGAATGGTTCA 26480 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 33 30 99.8 36 GTTTAGATCGTACCTATAAGGATTTGAAAC # Left flank : ACGGTGCATCGAACCGATACAGCCAGCGATGGACGAAAGGTGACCAAATACTTCTCACCTCATGATCCTGCCTTTGAACCGCTCATCAATGAAAACCTATCCAAAAAATACGCTGCTTACTATGGTAAACAGATGCCAAGTAAAATCCAAATCAAACCGCTCCAACTTGGAAAGCGCGATAAAGTGATTACACGTTTTAAAGGCTTTATCATTGAAGGGTGGAATGGTACCTACCAGCTGCAAGGTGATCCCGAAATACTAACCTTCGCCAGTGCAGCTGGGCTAGGTGCACGAAATTCACAAGGATTTGGACTACCAGAAGTAAGAAATTGAACTGTCGTCGATCTCCAATAGCGTAGTAAACCCCGGAGATCGACGACACATCATTTTCACCCCAACCTCCCTGTCTACCTGCCTTCTCAAAAAATCCTCAGAATAAGATAGACGATTCATTTACTTTGCTCTATACTGAAAAAGAGGCGCTTTTCAGCACCTTTTGG # Right flank : CTTATACCCTAATAAATTTGCTTTTTCGTCGTTCTCGTTCAATAGATAGCAGCTCAGGATTCTAAATGTTTCGCTTCTATACCTAATTTCTACTAATATATATTGACAAATGATAATTCACATAATAATATAATTTTTATAATATATTAAATTTAACTCTTATTTGTCAATTTATAGTTATGCCTGTATCCCATAATTTATCCAACTTAAGGGAGTGACGGGGTGAACCTACCACAAATAACGGCCCAAATTGGGGAAGCAATCAAAGAAAAACGAAGTCATACTAGTGAGCTTGCGATGTTGGTCAAAACGATCGAGATTAAAAAAGAAGAATCTTTTAATGTATTTATGACGATTGATCTGGATCAACAAGAAATCCGCTTTGAAGATCCAGCACCTTATAGCGAAGAAAGCTGTTATCTGTATCATTACTTTCATAACAACGCGAGTGCAGGGCGACAATATTTTCTCACTCGCCGTGGAGATGCTGTTTCCTATCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGATCGTACCTATAAGGATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 35069-36687 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXAH010000026.1 Hazenella sp. IB182357 Contig_26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 35069 30 100.0 37 .............................. ATTTTTTTTCATGACCTTTCGAACATTCGGCAAATTC 35136 30 100.0 38 .............................. ACTTGATACTATGTGATCTATGGACGCACTGGTAAATC 35204 30 100.0 36 .............................. CTTATATGGAGTGTCGTACTACTTATTGTCTTAAGT 35270 30 100.0 36 .............................. TTTTATTTCCATCTTGGTACTACCTTTTCGTCATAC 35336 30 100.0 35 .............................. CATAAAAATCAATCCCTTTTAACACCTGTACTGGT 35401 30 100.0 35 .............................. AATTGAGCATCGATACAACAATGTTTGAGCAGTTA 35466 30 100.0 35 .............................. TCGAGCTTGTGAAGGCTGCCAAGGGCGGATTAACC 35531 30 100.0 35 .............................. TCAAGAATCCAACCATGCTCAATCTCATAGAGAAC 35596 30 100.0 39 .............................. AACAACAAGTTCATACTAATCGGATACTCACTATCACCA 35665 30 96.7 35 ............................G. ACCTTCCGTTTCACCTTGCGAACGTCTTTCTTGCC 35730 30 100.0 37 .............................. TCCATAAATTGGGTGTGACCCCGTGCCCCGACCGAGC 35797 30 100.0 33 .............................. TCATAGCTTACTTGCTTCATTATCTCAGCATCA 35860 30 100.0 36 .............................. ATTTCTAATACCGAGACACCCTAGAAGGTATCAAAA 35926 30 100.0 39 .............................. TTGAATCCTTCCGTTTTGGCTGAAAGTTCTCCAAGCACC 35995 30 100.0 37 .............................. GGTAATAAAGGTGGTTCGGCTCCTAAAGGGAGTAAAA 36062 30 100.0 35 .............................. TCTGATCCAATAGGTGCTTGCCTCTTGTTGTGATC 36127 30 100.0 36 .............................. TGAATCAAGTCACTTTGGTAGGTCGAGTTGTACGAG 36193 30 100.0 35 .............................. CCAGATCCCACCATTTGTACAGCCACAATGTATGC 36258 30 100.0 37 .............................. TCCATAAATTGGGTGTGACCCCGTGCCCCGACCGAGC 36325 30 100.0 36 .............................. AAGCTAACACAGTGATGATGAAGCCAGTTCGAATCA 36391 30 96.7 36 ........T..................... CCAGACCGCAAAGGGGATTCGCTAGTTAACACCCAA 36457 30 100.0 40 .............................. TTGTGATACACGAGGAAGACGTTGGAAACCAAGTGATTAC 36527 30 100.0 35 .............................. TTTCATTAACTACGCTGTGTACGACATCCGCATAA 36592 30 96.7 37 .............................T GTATCTAACCATGTAATAATTCCTTGAGCCATAAATG 36659 29 83.3 0 ................CGG..G...-.... | ========== ====== ====== ====== ============================== ======================================== ================== 25 30 98.9 36 GTTTTGATCGTACCTATAAGGATTTGAAAC # Left flank : GAAAAGGAATATGAACCCTACCAAGCATTATGGTAAAAAGGGTTAAAAGAAAGGAAGAACATCGTGTTTGTCGTTCTCGTCTATGATTTTGCCCAGAAGCGCGTAAACAAAGCATTAAAAATTGCTCGCAAATATTTGCATTGGGTTCAAAATTCGGTCTTGGAAGGTGAAATTTCCGATGCCAATTATATCAAAATGAAAAAAGAACTCGAAATGCTAATGAATCCAGAAGAAGATTCCATCATCCTGTATACATTCCGTACAAAAAAATATTCAAAACGAGAAGAGCTCGGCTTAAAAAAGGGCGGAGATGAAAACATCATATAATCCCAAAATTGTCGTCGACCTCCAGTAGTGTAGTAAAGCCTAGGGATCGACGACAATTCATTTTCACCCTAATTCCGCCATCTACCTGCCTTTTGGGAAAATTCTCATAATAGGATAGACGATTTTCCTAATTTGATTTATACTGATAAAGGGATGCCACGCAGCGTTTTTGG # Right flank : CACATATAGAATTAACCCCCCCTGATTTACCTGTACATTAGGTAAATCAGGGGGGGTTACAGATTTCGTGAGTGGTAAAGTCCAATCTCTTTAGGGCTGGAATGAAAGTGGGTGTTGCTTATCCCTTTATGGAGTCGCTTAGCGCATTCCAAATGAAACCTTCACGTATTTGTGAAGGTCGGTTTGCTTCTGTCATTGAATGAGCCCTGCTTCTTTGAGAAATTCTTCTGCTACTTTATCAGGACTTTCCCGGTCAATATCGACACGCGCATTTAATTTTGCCATGGTATTCTCATCGATTTTATCTGCTAATTCATTCAGCGTTTTTTCTAATTCTGGAAATTGATCCAGTGTCTCTTGTCGTACAATCGGTGCAGCATAATACGGTGGGAATAGGTTTTGATCGTCTTTTACAACTTTCAAATCAAAGCGTGGTAGAAAGCCATCTGTTGTAAATGCATTAATCACATCTACTTTTTTTTCATTTAAGGCCGCATATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGATCGTACCTATAAGGATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 67872-68034 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXAH010000014.1 Hazenella sp. IB182357 Contig_14, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 67872 30 100.0 35 .............................. GCAAGAGATAATCTATTTAGTCGCTTACCTTCTGG 67937 30 100.0 38 .............................. CTTGATCCGTTAGCTCTTGCCTAAAGTCCTGGACCGGT 68005 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 3 30 100.0 37 GTTGAACAGTAACATAGGATGTATTTAAAC # Left flank : AATTTATTTCACAATTAATCCACTCATCAGACCTATCAGATGAGACAAAAATAAAACTCATGCAGACAGCCAAAGAATCCCAAGAGCACATCACAAAAGGAAATCGTTTCAAAAATGCATTTAACAAACTAAATCAAGAGTTAGAAAAAATAAGTGGAATACTTCAGGGAACATCGACATTAGGTCAAACGGTTTCTACGATTCTGAGTTTGTTAAAGTGAAAAGGATGCATAGTAGGAGTAGAGATTAACCTATGTCGATCTACTCCTGAACTAGGTATTGGGTGCAACTGTCACTTGATTTCGTCTTCCCCCTTAACGATTTTATCCCAACCTCATTTTCGACCAAATCGGCTGTAACCCTTGCTATGACTGATCTTTTCTTCCTTCTATCAACTGTATCAAAATAGAGCTCAGTAGGTTGGGATAAACCCCCTCAAACCCTTGTGATTCCTAACATTATGGGATATGATAGAAATCAAGAACCTAGTGTTGATCGGG # Right flank : CCCTCTGATCCATTGCTTTTCTTTCCAATCCTTAAACGTTGAACATGAACATGAACATAAAATGTACATTGCTTTGACAAAGCTAAACAAATATAAAAAATAACCCTGTTTAGAGAATATTACCAGTAAAATATCCAGTTTCTCTTTTTGAAGAATGACTACTGTATAATTTTTCACCATAAATACCACAAAAGACAAAGCTATGCATTCATCGGCTTTGTCTTTTTTTATATGAAAGCATATATGAGTTTGTCTCATTAAATTATGAGTTTTGTCCTGGTGGGGGATCAGTGTGAAAGCGAGTAAACATCAATAAACACTCCTTTTCCTAATTATACTATTATTTGCTCATGGTGCAATTGTACTTCAGTTTCAAATAATTTGGCAAGACATTCGTGAAAAAGTTGAGCGTCGACATGCTTAGCACATTTGGTCATTTCGACAAAAATAGGGACAAGGAGGCTGGTAAACTTGTGCTTCTCTATCAGATCACAGGCACG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAGGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 27-900 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXAH010000068.1 Hazenella sp. IB182357 Contig_68, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================== ================== 27 30 100.0 36 .............................. CTCATTTTGTAAAACGTTTTGATGTAGCTAGAGGTG 93 30 96.7 36 ................G............. AAGTAGTCAAAATGTTTCTGGTTTATGCGATACCCT 159 30 100.0 36 .............................. AAAGTACGTAAACGTGTAAGTCGTGCAAAACACGAG 225 30 100.0 36 .............................. AGAAAGTGATGCTCCATAAAACGCTAAACGCCCACT 291 30 96.7 90 .......T...................... CGTGAGGAATCCGAGCAGGAAGCCGAAATGATGGAGTTGAACATTAAATTTAAACTTCTTCTGAATCTCTTCTATAGAACGATTGATGAG 411 30 93.3 36 ...............AG............. TATGGTAACTTAGCAGTAGCATAATCCTGATTGTGA 477 30 93.3 36 ...............AG............. GATTGGTAAGTACTTAAAAAAGATTAGGGAAAGAAA 543 30 100.0 35 .............................. ACAGCTCGCTATCTCGCCGCCAATCATAAACCAGG 608 30 100.0 36 .............................. TCTCTGAGTGCAAAAAGCGATGCCTTTTTATATTCT 674 30 100.0 35 .............................. TAGTGAGTAATTGAAGTTCTTCCAACTTCAATTTT 739 30 100.0 36 .............................. ACAACCGCCCAATGAACATATGGCTACATGCCAAGT 805 30 96.7 36 ................G............. TTATTAGAACTGATTATGGAAATAATTCAGTCAATC 871 30 96.7 0 ............................G. | ========== ====== ====== ====== ============================== ========================================================================================== ================== 13 30 98.0 40 GTTGAACATTAACATGAGATGTATTTAAAC # Left flank : TACCGTAGATTCGATGTGAAAAGGATG # Right flank : CTGGGAAAGTAACAACCCGATCCTCACTGATGCAGTGGGGATTTTCTATACCAAAAAAACCCCACCGTTTGGCAGGGTTAGTTATTTGATGTTTTCTTTATTTAACAACAGTTACTGTGTAGAGCTTTGTTAATGTTAGTGCTATTTTCATTATCTATATCATCACTCAATCCTGAAAAAACAAAAACTAATATCATCAACATCATTAACATATTTTTCATTTATTTTCCTCCTCCCCTTTTTAATGAGAACTCAAGTGATTATAAGGATTTGCCAAATCTTTATACATTCTCATATAATACATTTCCATTTTCTTGTCAATATTTGTATAAGATATCGCTAGCTTTAAACTCACACCTTTTATTTCAGACTTCTTCGATTCCAATTTTTCATATATTTTTAATGCCTGTTCAAGATTTGAGATAGACTCTTGGGGCTTGTCTTTCATATAAAAGTAATCTCCTATCCCCTCAAGAGCAACCGCGTACTGTTCGTAAGCA # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.37, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //