Array 1 991641-985069 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHKPV010000021.1 Marinobacter salexigens strain D2M19 D2M19_D2M19_contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 991640 28 100.0 32 ............................ AATTAGCGCAATGCCAACTGGGCCGCCCAAAA 991580 28 100.0 32 ............................ GACGAGATTGAGGCCACGGTAAACAATCTGTT 991520 28 100.0 32 ............................ CTAGCCAGCCAAAGGTTTTAGACGGAAAGCAG 991460 28 100.0 32 ............................ AAATTCCGCCCCGGCATAAACCGTGCCAACTT 991400 28 100.0 32 ............................ GCCGAGTTGTCCGGCAGTGCCGATAGCAGCGG 991340 28 100.0 32 ............................ TTTTTGCCCCGGACTGTTACGAAGTCAGAAGG 991280 28 100.0 32 ............................ GTACACAAGCACATCACCGCCCATTCTTCTTA 991220 28 100.0 32 ............................ TTTGAAAGCGCTGCTTATGTCGCTCGCTACAT 991160 28 100.0 32 ............................ ACTACCATCGAATAGCACGATATGCACCACAT 991100 28 100.0 32 ............................ GATGACGTAACAATGCGATTCGTTAAATAGCA 991040 28 100.0 32 ............................ TGCTATCCACTGTTAAATAATCGGCGGTATGA 990980 28 100.0 32 ............................ TCGATCACGATCTCCAGTGTGGTAGTCGCGCT 990920 28 100.0 32 ............................ TGCAACCCTAAAGCGTCATATCCTTCCGCAGA 990860 28 100.0 32 ............................ ACACCGTCGACGTCTAAAAATGGCCCGCTTTT 990800 28 100.0 32 ............................ CGACCGCTGGCGGTGTACCAATTAACAAAATC 990740 28 100.0 32 ............................ TATCTGCGCAGCTTGCGAATAATACAAGCACC 990680 28 100.0 32 ............................ AGTCTCCGGATCAAATGCGCTTGATCATGCGC 990620 28 100.0 32 ............................ TGTAGGAGGTGGTCAACTGAATACGCTAATCG 990560 28 100.0 32 ............................ CGGCAGTGGTCGCGGCAATCATCAAACACGAA 990500 28 100.0 32 ............................ GCACCGAAAGTGGCGCGAAAATATTGTTCGAT 990440 28 100.0 32 ............................ TGACTATAAAAAGGCTTATGGTGTGCGGTTAA 990380 28 100.0 32 ............................ TTTGCGCGATATAAGTATTCGAGTGGCCTTTA 990320 28 100.0 32 ............................ GCTTGAGCTTTCAAAATCTCCCCCAGCAGGAT 990260 28 100.0 32 ............................ AGTCGACTAGATTCTCCAGGATGTCTACAGTC 990200 28 100.0 32 ............................ CCGCTGTAGGCGACCCCGTCTTCTATCCCCGC 990140 28 100.0 32 ............................ CGACCCAGCGTACCCAGAGCTGTAGCGACTTG 990080 28 100.0 32 ............................ CGTAAGCAGCGGCCTCTATTGCCAGTCGCGCC 990020 28 100.0 33 ............................ CAGCGAGTGGCCACCACCCCCACCGCTACTCGA 989959 28 100.0 32 ............................ CCATTCCTAGTAGAGCATTGCTTGTGGCGTCG 989899 28 100.0 32 ............................ AGCGTATCGGATATAATGTAAGACACGGTAAT 989839 28 100.0 32 ............................ GGCACCGCGTCGGGCGGGCTGTCCGCGTATCA 989779 28 100.0 32 ............................ TGCTCTTAATCCGAGCGCCACCACCCCCACTG 989719 28 100.0 32 ............................ GGCGCGGCGCGTACTGAGTCAAGCCAATTAAT 989659 28 100.0 32 ............................ AGCCCGCTTGCGCCGTGTGCGCCTGCAGCACC 989599 28 100.0 32 ............................ CGGGGACGCCGGGACGATCAGCCATCGAGAGG 989539 28 96.4 32 ...........................G CGCGCTCAGGGTGATGCAGAGGCGGTAGGGAT 989479 28 100.0 32 ............................ TATGCCACAGCACACAACAAACGCGAAACCGT 989419 28 100.0 32 ............................ AACACAGCATCCTCCTCAAGATTCATCGGATC 989359 28 100.0 32 ............................ TCTCCATGCCCGCAGAGGCCAACTTGCAAAGC 989299 28 100.0 33 ............................ CTCGTTCTGTATTTTGTTATTTTCGGCAACAGT 989238 28 100.0 32 ............................ TCCCAGTTGCGCACGTCATGCCAGACCTGTTT 989178 28 100.0 32 ............................ TCTTTAGCGTCAAACTGACCTCGTGAGTTAAC 989118 28 100.0 32 ............................ TAGTTGCAATCATCTCCCGCAGCGACTCAGCC 989058 28 100.0 32 ............................ ATCCCCTGACGCTGAGCCAGCGCCTCCCTAGT 988998 28 100.0 32 ............................ TGTCAGATGCTACCCACTACATACCACTAAAG 988938 28 100.0 32 ............................ AGCGCGAAATAGACGAAGCCTCAGACGCAGAG 988878 28 100.0 32 ............................ TGGATATGCCCCTTTCGCAGCCTCCACAGTCT 988818 28 100.0 32 ............................ TAGGCAGGACTGCCGGGGGTAGCGTAGGCTAT 988758 28 100.0 32 ............................ TGTACTCAGTCGTATACTCACAAACAAGCGTG 988698 28 100.0 33 ............................ CAAGCATCCAAGTGACAACTTGTAGCGCTCTAG 988637 28 100.0 32 ............................ TATTCAGTATGCCGACGCATGGCGGGGCGCGG 988577 28 100.0 32 ............................ CAACTAACCTTGAAGGCAGAAAATTATGAATA 988517 28 100.0 32 ............................ TTGCATCGCCAGAAAGAGCAGACGCCCCTTGA 988457 28 100.0 32 ............................ ACTAGAGACAATGTACCAGCCGCGCCGAACGT 988397 28 100.0 32 ............................ AGTAGCTCTGGAGCTTTCCTGGAGCTTTGTAG 988337 28 100.0 32 ............................ TGCTTAGAGCCTGTTGCGTGCCATTTCGTGTA 988277 28 100.0 32 ............................ GACTTGCTTAGTTGTCACCTGATACATGCTCT 988217 28 100.0 32 ............................ ATCATGTGGTGCGGCGGAGTGGGGCGAATGGA 988157 28 100.0 32 ............................ ATCAATGCGCGTCTTTGCGCTTGGTGAATCAT 988097 28 100.0 32 ............................ GTGGTCACGTCGACCCGCTCGGTCAACATGCC 988037 28 100.0 32 ............................ TCTTGGTCATGAATGGCCAAAGAATTGTTCAG 987977 28 100.0 32 ............................ CTCGTAGGTGCTTCTTAACCGCCAACCTACAA 987917 28 100.0 32 ............................ TTTCATAAGGACAGAACCACAAAAAGACAAAT 987857 28 100.0 32 ............................ AGGTGTAGCCGTAACCATGCCGTTAGCTTTAC 987797 28 100.0 32 ............................ CATTACCGCTACCAAGCGAAACGAGAGCCTAG 987737 28 100.0 32 ............................ TCCGGCCTGAGCTTTGCAGCCGCACCTTTTGC 987677 28 100.0 32 ............................ TTCTGAAACTCCATTTGCAGCTTTTCGTTCGG 987617 28 100.0 32 ............................ TGCGTAGCGGGCACGAAAAAAATACTTGACAC 987557 28 100.0 32 ............................ TTTCGTGCCGGGGTTAATTTATTACGAGCATT 987497 28 100.0 32 ............................ ATGCCGCCGCCGCCACTGTTCTTTCCTCCACT 987437 28 100.0 32 ............................ CAGCGAATCCGACAAGACGATAATGGGCAATG 987377 28 100.0 32 ............................ GTCAAACAGCGCGCGGGCCGCTGGCGTCAGCT 987317 28 100.0 32 ............................ TATGCCAGATTTCAGGAATGGAGCACTTATTC 987257 28 100.0 32 ............................ ATATAGCGCCGATCCTGAGCCCGCGCCATGCG 987197 28 100.0 32 ............................ TTTGTGCAGGTACGCCGTGGATGTTATGTAAA 987137 28 100.0 32 ............................ ATGCCGCATCCTCATTTTGCGGGATCTCTTCG 987077 28 100.0 33 ............................ CGAACGTGACAGTCCCCGAATTACCGGTGTCAT 987016 28 100.0 32 ............................ AATCATGCAACTGGCTGTTGACAAGCCCGTAT 986956 28 100.0 32 ............................ CCCCAGTAAATTGACGGTGACTGCTGCCGATG 986896 28 100.0 32 ............................ AACAAGCAAAAAGGCCGCTTTTGCCGCTGCTA 986836 28 100.0 32 ............................ AGAGCGCAAAAGGGAACGTTGGGCACGGTGTA 986776 28 100.0 32 ............................ GTAACCGTCAATTCATTGGGTGACTGGTTCAT 986716 28 100.0 32 ............................ TTATTTAAAGATGATTTTGCGAACGGGTTCAG 986656 28 100.0 32 ............................ TTTTCTAGCGCCAGCTCTGCGTCTGAGGCTTC 986596 28 100.0 32 ............................ AGCCCTCGAACTCAGCCACCGCCCCCACAAAT 986536 28 100.0 32 ............................ TCAAGCTCCGCCACTCTTGCCTTTAGCTGATC 986476 28 100.0 32 ............................ TGCATAGCCGTCTCATCTAGCAGGTACAGCTT 986416 28 100.0 32 ............................ ATTTGGCGCTGGCGCTCTTCCTCTCGCATGCG 986356 28 100.0 32 ............................ ACTATGCGGTTACCGCGAAACTGGACGTATCA 986296 28 100.0 32 ............................ TGTTCAAGGCGGACGTATCAGCGGTCGAGTTT 986236 28 100.0 32 ............................ TTTTAACCGGCTATACATTATGCGCACTAGAG 986176 28 100.0 32 ............................ TTGCGGCTGGCGATGTAGTACATATCGTGCAT 986116 28 100.0 32 ............................ TCCCTTGCGTTGCGGTGCGTATCATCTCAGGT 986056 28 100.0 32 ............................ AGTAGCCGCGTTTATCAGTTAATATCCACGGC 985996 28 100.0 32 ............................ CAGGCGTCCGTCCTGCTGGACAAAGACGGCCA 985936 28 100.0 32 ............................ AGCAGAATCCCCGCTCCCACTGTCAGCGCTGT 985876 28 100.0 32 ............................ CTGCGCAGCTGGACGCGTTCATCGCCGAACTG 985816 28 100.0 32 ............................ GAGCCGTGTAGCTCACGATTTCGGACGCCTCG 985756 28 100.0 32 ............................ GGTAACAGACGACAAGCTCCCGGCAGTGGTCG 985696 28 100.0 32 ............................ GTTCATAGTGGTTGAGAGTTGGTTGCGTAACC 985636 28 100.0 32 ............................ GTTACGACCCAGTCGTAGTCAGGGCCGGACTC 985576 28 100.0 32 ............................ AGCTATCACCGACCACAACGCCCCCGCTTAAC 985516 28 100.0 32 ............................ TGATTAAGCATGACGAACGGTTGGGTCGTTTG 985456 28 100.0 32 ............................ TCTCTCACATCACTCATCGCCTGAGCCCTCCT 985396 28 100.0 32 ............................ GTGCCCACCTCCAAGGGAAAGATCACCGAGGA 985336 28 100.0 32 ............................ ACCGGCAATCTCGGATAGGGCGCGCCCGACTT 985276 28 100.0 32 ............................ AATACGGCCCGCACCTGCGCAAGCTGCCCGCA 985216 28 100.0 32 ............................ CTTCACCATAGCCTCTAGTGCAGCGCGATTTA 985156 28 100.0 32 ............................ CGAACGAAGATCACGCGGCGGACAGCTACAGC 985096 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 110 28 100.0 32 GTTCGCCGCCATGCAGGCGGCTTAGAAA # Left flank : CACACCTAAAGTCGATTCAGACGGTTCCCGAACCCACGGGTTATGTCAGCTTTATGCGCTACCACGCAAAAGGGGCGGCGCGCATTGAAAAAGACCATCAGGAAAAAGCTCGGCGGTGGATGATTAAATCAGGTAAACCCTTGAATGAGTGCCTGAAAGAACTAGATAAAACACGGCCTGAGCCAATGACTGGCCTGCCTTTTCTCTGGGCGGAAAGTCAGGAAACAAAGCAGCGTGATGGCAGCCAAGCACGAAAATTTCCTTTGTTCATCCAAAGAAGCGAGATGGCTGGAGCTCGGGAGGGGGGCTTAACATGCTACGGGTTGAGCCGACCTGAAGAACCCATAGCTCTACCTGTGTTTTAAGGAAATACCAAAAAAATGGCTCTTTAAAAAAACAATTCAAAGTCAATAGGTTGCAGCAGGCCAGTTTGGGAAGGGTAAAGTTGCTTTTTTCCGTTAACTGCTTGGTGTAGCCTCTTTTTTTGTCCAGAAGTTATT # Right flank : TCAACGTGCAGCAATCCCTTATCAACGCTCAGATCCACCGCGCTGGATATTAAGCGTTGGATTGTTGCGAACATTGGCGAGAACATTCACCCGCTCAGCGCCTTTGACTGCGGCCCACGCATCTGTAGCGGCAACGCCAGCTTTACACCGCATCGGAAGAGGAGGGGTGAGAAGGCTTCAGCCAATGCGGCTTACCTGCAATGCTGGCGCGAAGGTGTGTTCAAGAGCGGAAAGCAACTAGCAGCTAGAATATGGGCGGGCGCCACGCCTCGCCGGGCACCCTTCCGGCGAGTCAATTGACGGAACTCGAAGTCCTTGCTCGCCTAGAAGGCTTAGTGTTTGAGGCTGTCATGGCGAGTATCAACACTGTCGCCCGTTCCTTGCCGTCAAAGAAAGGGCTGGAGTGGCCCGGCCTGTCCCCCGGTCACAACGTCTGTAACGTTTCGTGGTATGAGCACGACGTTCAGGTGTGCCAGACCGGACAACAAGAGTGCAGCAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCCGCCATGCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGTGCAGGCAGCTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.90,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //