Array 1 50518-56646 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRIN01000011.1 Corynebacterium striatum strain 2296 scaffold15.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 50518 29 96.6 32 ............................G CACTAGGATTCCTCTCTAAAAATGCGAAAAGC 50579 29 100.0 32 ............................. TAGAAAACCCCCACCAACCAGCAAAAACGCTA 50640 29 96.6 32 ............................G ACCTGGGCCGCTGTCGAGGCGACCGGCATGGA 50701 29 100.0 32 ............................. AAACCGGCCAATAAACACCGCGGGAAGTTCAC 50762 29 100.0 32 ............................. TCGCGGCCCCGACCTCTTCAATCACCTCACTG 50823 29 100.0 32 ............................. TCGGCCAAATCAGCGAGATACGCGGTTTCCGG 50884 29 96.6 32 ............................G GCGGCGTAGGTGTCTGTGTAGGTGGGGTTGAA 50945 29 100.0 32 ............................. CATATACGGCGTGGACGTGTCGGAACACCAGG 51006 29 100.0 32 ............................. ATCCATCGGGTCTTGGCCCCAGAACCCGCCAG 51067 29 100.0 32 ............................. CAAGAACTCACCGCTAACCTTCTACGACTCGG 51128 29 100.0 32 ............................. CAGCCTTTTTGGCGCGGTCGATAGTCCACGTG 51189 29 100.0 32 ............................. ACTACCCCACATAACGGGCATACAACCAGCCA 51250 29 96.6 32 ............................G AAGCGGGTGCTGCTGCCCAGTCAAAGCACCGA 51311 29 100.0 32 ............................. CATGCGGCGTCACCCGAGGAAAAGCTGGGTCA 51372 29 100.0 32 ............................. CCGGCCATTCGTTCGCGGCCCTTGGACTTCCA 51433 29 96.6 32 ............................T CAAACCCCAGACCACCAAAAGCTAATCATGAC 51494 29 100.0 32 ............................. TGAAGACCAGGTGCACCCTATGGGTGTTCCTG 51555 29 96.6 32 ............................T GACGACCCGGATAAGGCTGGCGATAAGCAGAC 51616 29 100.0 32 ............................. ATTGTGCGGGTGAAAGCGACAATGGCGGATGC 51677 29 96.6 32 ............................G ATCGACCAGGGCAAGTACTTCTCCTTCGGTGT 51738 29 100.0 32 ............................. CAACTCATGATTTAGGCCTCCCCATCGAGGTT 51799 29 96.6 32 ............................G TACTGGCGGGCTTGCTTGCCTTTGTCGGTGCG 51860 29 96.6 32 ............................G ATGCCGGCCATCACGCTATCCGGTGAGCTTCA 51921 29 96.6 32 ............................G AAGGACCGGCAAACACTCGAGGAGCAGATGGG 51982 29 100.0 32 ............................. AGATCGCTTTGAGTTTCAGCCAAAGCGTAAGA 52043 29 100.0 32 ............................. CCAGCGACATGCCGTATCGGCGTTTGGAGGTG 52104 29 100.0 32 ............................. AGCATCCACGAATTGCGCAGCGCCACGAGTAC 52165 29 100.0 32 ............................. TTCGTCAACGCCTACGCGCAGCAGGGCAAAGG 52226 29 100.0 32 ............................. ACCGGCACCGACAAAGCAACCATCGTGCGCCG 52287 29 96.6 32 ............................G TAGGATTCGTAGCCCTCCTGCACACCATCGGT 52348 29 100.0 32 ............................. AGATCGTCGCGCAACTTCCAATGCTTATACGC 52409 29 96.6 32 ............................T GTGCCGCAGCCTTAGCAACTGCCGGAGCCTGA 52470 29 100.0 32 ............................. GCCCCACTGTTGCAGGGTTTCGGAATGCCCGG 52531 29 100.0 32 ............................. TTCGCCTTAGCAGGAATCGACGCCCCCGACGA 52592 29 96.6 33 ............................A TACGACGTCGTGAATGAGTTACTCCCTGGGTGC 52654 29 100.0 32 ............................. TTGCTGGTCAGTCGATGTTCACGTTCAAGGAG 52715 29 100.0 32 ............................. AAGAAAGGCACCCGCGACGGCGGCAACCGTCC 52776 29 100.0 32 ............................. ACCGTATTCCACACGTCAGCCGCATTAAGTGC 52837 29 96.6 32 ............................T AAATCTGATTCGGCAGATTAAAACACTCGTCA 52898 29 100.0 32 ............................. CAATTGCCGTACCTTACGGCGCGAGGACGTCA 52959 29 100.0 32 ............................. ACCTCCGACGAACGAGCAGACTCCGCATCCGA 53020 29 100.0 32 ............................. AGCTAGCCCTACTCATCGGAGTGCACACCGCA 53081 29 100.0 32 ............................. GGCATTGAATCAGACACGCCGGACACGGGGGT 53142 29 100.0 32 ............................. GCGCCTGTCCTTATCGACCCCAACCAATAACC 53203 29 100.0 32 ............................. ACGTCCGCGCCCACCGCGACCACCCAGATGAA 53264 29 100.0 32 ............................. CATTTGCCGCGGACTTCACCGCACCAGTGGAC 53325 29 100.0 32 ............................. ATTTTAGCCACGGTGCCGATGTTGTACTTTCC 53386 29 100.0 32 ............................. CACTGTGTGTATCGCTCCGACACTTCTAGGAA 53447 29 100.0 32 ............................. CGCTACGACGAGCAAAATAAGCAGTGGGTTAA 53508 29 100.0 32 ............................. GGAAGCACACAACCACACATCTACCTCGGCGA 53569 29 100.0 32 ............................. TCCCCCGACTACGAGGGCAGCCTGCAAGACTT 53630 29 100.0 32 ............................. CGAATCTTGGACATCCTAGGAGACCACGATGG 53691 29 100.0 32 ............................. GCTGCACAATCGCCTCATACCCCATCGAATTA 53752 29 100.0 32 ............................. CGCAACCCATAACGATTACGACACTGTGACGA 53813 29 100.0 32 ............................. GCCTCGTCGGCTGAGATGACGGGCATTTCTCA 53874 29 96.6 32 ............................G TCTTGGAAGTACTTTTGTGTGAGTGTCATAGG 53935 29 100.0 32 ............................. CTAACCCTTGTCGATGCCGTGGCAAGTATTCG 53996 29 100.0 32 ............................. GCCTCGTCGGCTGAGATGACGGGCATTTCTCA 54057 29 96.6 32 ............................G TCTTGGAAGTACTTTTGTGTGAGTGTCATAGG 54118 29 100.0 32 ............................. TATGACCGTGCCCTCGCGGTACTCGAAGCAGC 54179 29 100.0 32 ............................. CCTTTTCGGATCGGATGCTATGCGCCTGGCTG 54240 29 100.0 32 ............................. TCCGCCCCCTTGCCCTGGCACTACTCGCACAC 54301 29 100.0 32 ............................. ACCTCAGCTCGGAGCTCGTCGATGGCCTATTC 54362 29 100.0 32 ............................. ACTACCCAGGGTGGACGAGACACCCGTGGTAT 54423 29 96.6 32 ...........A................. TTGCTAGTGTCTGGCTCGAAGTACTTATTCGA 54484 29 100.0 32 ............................. CCGGGTTGCATTGTCTACCGGGGTGGTATATA 54545 29 100.0 32 ............................. AGTTTCACTTGGGTTGCGGGGATGACTCCATC 54606 29 100.0 32 ............................. CAGTACACAGAGTGGGGGACAGCGCGTGAACC 54667 29 100.0 32 ............................. AGCGAATGGTTTGCGTGCCTGGCTGGCTTTCG 54728 29 100.0 32 ............................. CAGCACGGGGCTGGCTAGGGGTGTTAGCCGCT 54789 29 96.6 32 ............................G CCGACGAGGACACCAACGAGGAAACCGAATAC 54850 29 100.0 32 ............................. TTTGAGGTGGTCCCACTTCTCTACCTCGTTGG 54911 29 100.0 32 ............................. AAGTTTTCCTGCGGTAGCAGGTCGCGGATTGC 54972 29 100.0 32 ............................. TAGCAGGCAAGCAGTTCTTCGACACCGACAAG 55033 29 100.0 32 ............................. CGTCCATGTGTTCGGATGCCCTAGCGCGTCCA 55094 29 96.6 32 ............................G GAAGGCGTGGAGGTCGCGGCCCATGACGGCTT 55155 29 100.0 32 ............................. ACCATGAATGCCGTGTCAGGTGCTACGGCATC 55216 29 100.0 32 ............................. ACCAGACAGGGATTCAAAAACACCCTTGAGCT 55277 29 100.0 32 ............................. TCTGGGCCGACAAATAACACCCCCCAAAAAAC 55338 29 100.0 32 ............................. AACTACGCAAACCCACCAGCGACACCAATTAA 55399 29 100.0 32 ............................. GGCGAAACCCCCACCGGGGATAATCCCGGCGG 55460 29 96.6 32 ............................G TAGAAATGACTACCTAAGCAATAAAGAGATGG 55521 29 100.0 32 ............................. GGCCACCTATCGCCCCGGCGTGTAGGTGAACT 55582 29 100.0 32 ............................. AGGGCGGCGAGGGATTCGAAAAGCTCAAGGGG 55643 29 89.7 31 ..........................TAG GAGGCTCACATGATCGATACCCGTCCGGTGG 55703 29 96.6 32 ............................T GTCACACAAGGGTGTCACAGCGCCCCGACCCG 55764 29 96.6 32 ............................G TAATGGGCCTGGGAATCGCTTTATCGCTCACC 55825 29 96.6 32 ............................G TTCTGGAAGTGGTCATTAAACAGTTCCATTAC 55886 29 96.6 32 ............................T CCTGCATCGCTATCAGGGCTGCGCGGCCCTTG 55947 29 100.0 32 ............................. CTTACTGCGCTTCTCCCCCTCCCTGGTCTCCC 56008 29 100.0 32 ............................. TCTACGGGCCACAACCAAATCTCATAGCAGCC 56069 29 96.6 32 ............................G CTTTATGTAGGTAATAAAATCCCTAAGCAGGT 56130 29 100.0 32 ............................. CAGGCACCGATCACTCCATGATGTACCGCGAG 56191 29 100.0 32 ............................. GCGGCACCGACACCGCCCACGGCGGCACCCAA 56252 29 96.6 32 ............................T TTTGCTGCCATCAGCCACCGCCTTATCCACGT 56313 29 100.0 32 ............................. GCCATCAACCCATGCAGACCCCAGCACACGTG 56374 29 100.0 32 ............................. CCTTAAGGACTTCGAGAACGCGCCAGAGGGCA 56435 29 100.0 32 ............................. GCACAATGTCGCTCACCTCGCCTACCATGACG 56496 29 100.0 32 ............................. ATACACCGCCCTAGTGGACTTCCTCACCAATC 56557 29 100.0 32 ............................. CATAGCAGTCCCTCATTTCAATATCGGCCAGC 56618 29 96.6 0 ...........................G. | ========== ====== ====== ====== ============================= ================================= ================== 101 29 99.0 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GTGGACAATAGCGCCGAGTCAATCGATGTAGAGCTGCTTTTGTGGAACGAACTTGAAAATATTGCGGCTGGTACTAATTGGTCAGACTTTGATCGGAGTTCTCCATGATGGTGCTCGTCGTTACTGCATGTCCCGCCGGCCTGCGCGGTGACCTTACTAAGTGGTTACTTGAGATTTCACCTGGGGTGTTTGTGGGTCGTCCATCAGGGCGCATTCGTGATCTGTTGTGGGAACGTTGCGTAAGTTTGTGCAAAGATGGCCGCGCTATTTTGGTTTTTAGCTCCGATAATGAGCAGGGGTTGGATTTTCGCGTTCATCGCCATGAGTGGGAGCCTGTGGATTTTGATGGTGTCACCCTCATGCGAAGAACCACTGCGCCATCAAAAGCTCAACGCCGTACCGGCTGGAGTGCTGCCCGAAATGCTCGCCGACACTGACCGTTACACCATAAGTCGGATCTGCTAGCCTCGTTTTTGGCTCTTCCACGCTGGTCAGTAAGT # Right flank : CTTCCATTCTGCTGTGGAAGGTACAGAAAGAAAGTCTGACCTGTGAAACGTGGGGATAAGATTTTTCTGTTAAGAAATACCCGTTTGCCCCACAGTTTTCCGCGGATTTGGAAGAGTGTTTTCTGCGGAACGTAGTTTTTAAAATCGGACCACACGGTCCCTACATCCTCATCACAAGATGCGAGCAATCCTCATTTACGCTTTTTCGCAGAGGAAGCGGATGACCTGGACGTACTCGAGTCTGTTGGAAGAAATGCAACATGGTGCTGGAGTGAAACCCTATACAGCGTCGAAGCGACGTTGGTTATCTTCGCATACATTGATGACGTCCATGTTGCTACTGGGCCAGTGGAAGATCATTGCTCTAGATCTTGAATTGAGTCACCGAGCGCTGCGCGAGGCGGGGTTGTGAGGATTAGCGGTCGGATGCTCAGTGTGGTTTTAGTAAATGTATTTATCTGCCTTGAAAGTTTGAGCCGTCCCAACTTTTAACCGCCAGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //