Array 1 3562-1553 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUYU01000008.1 Moraxella pluranimalium strain CCUG 54913 54913T_ctg_0000008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3561 28 100.0 32 ............................ CGAGAGCTGCGCCGTCTGGAGTTACTTGGTAA 3501 28 100.0 32 ............................ TAATGCGGCAGCCATTTTTTAGGCTTTTAGTC 3441 28 100.0 32 ............................ AATGATGCGTTTGGTGCTATCATCACAAAAGC 3381 28 100.0 32 ............................ TTTTTCCGTTATTTGCTCAAGCTAATGTTGAA 3321 28 100.0 32 ............................ CCAAGAAATCGCAGCAGGTACAAGTTTAGCCG 3261 28 100.0 32 ............................ CCGAGTGTTCCAGCACTATGACGGGGCTTTTT 3201 28 100.0 32 ............................ CATTATCGCGGTGATAATCTCAAAGCCTTATT 3141 28 100.0 32 ............................ TGATGAATTACTTGATTATTATGTTAATGCAA 3081 28 100.0 32 ............................ ACTCAATAGAACCTTTAAATTGTCGCCTTTAT 3021 28 100.0 32 ............................ TATATGTAGCAAGGGTGGAATGAGATTTCGTA 2961 28 100.0 33 ............................ ACGAGACCAAACCAATTGACGGCGACCCTTAAA 2900 28 100.0 32 ............................ AATCAGCTAAATTGTTGCCCCATGAGCGTGTA 2840 28 100.0 32 ............................ TTGTTCGATATGCATTTGACTCTATCCTTATC 2780 28 100.0 32 ............................ CATCCGATAGCGCATTTGGGCACTTGTGAAGT 2720 28 100.0 32 ............................ TATTATCTTAGGCCGACATCGATGCTAAGGCT 2660 28 100.0 32 ............................ TGGAAAAACTTATCCTTGTGAACTTCACGGGG 2600 28 100.0 32 ............................ AAAACCAGTTTTGTTATCAAGCAAAACAATAA 2540 28 100.0 32 ............................ ATCAAAGGCGGCATCAATAGCATTGCTTGTAT 2480 28 100.0 32 ............................ AGCATCAGCAGGGTTATGAGCCCTGTGGCATA 2420 28 100.0 32 ............................ AATGGTGCAGACGGTCAAGCCATGAGTGCAGG 2360 28 100.0 32 ............................ GTTGAGCAGTATGCTAAAGCCGAACCTGATGA 2300 28 100.0 32 ............................ ATCAAAGGCGGCATCAATAGCATTGCTTGTAT 2240 28 100.0 32 ............................ ACACGCCAAACGCATCGTCAACGAGCTAATCA 2180 28 100.0 32 ............................ AGACTACGGGCACAAAGATTACGCAATGAGCA 2120 28 100.0 32 ............................ AGAATAAAAGCCATAACCAGTGATATTTAGGT 2060 28 100.0 32 ............................ AGTGGCAGATCGCATAAGCACAGCTTGATACC 2000 28 100.0 32 ............................ AACAAAGATTAGCGTATATGCTGACGTACCGT 1940 28 100.0 32 ............................ ATTGCATCAGTTTTAGGGCGATTGGCAGGCTA 1880 28 100.0 32 ............................ AAAAGCTTCTTTGGCTTCTGCTGTTGCTGGTT 1820 28 100.0 32 ............................ TAATGTCTTAAATGACATAAGAAAACAATCAC 1760 28 100.0 32 ............................ AAAATATCATCTTTGTTAGCGTTGATATACTC 1700 28 100.0 32 ............................ AATTCTTTGACTTGTTGCGTCGTTATGAATGT 1640 28 100.0 32 ............................ ATGCCTGTGGCCACCGCTCGAGTCACCGCCAT 1580 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 34 28 100.0 32 CTTCACGACCGCATAGGTCGCTTAGAAA # Left flank : GCATGGCGGCTTGGGTAATAGATGTGCCTGTGCCGAGTAGAATACAAGTGGTATTGGCAATAGGGATATTGTAATAATGATTTTCGTATTTTGTTTCCGTCAAATACAAAACACGCCCATCTTTTTGCATGACACGGCAATGTTCCAAATAAAAGATATTGGCACGTTTTGAATGTAAAATTGCTTTTAAATCAGTAGGTTTGAGCGTGTCCATGGCGTTAATTTCCTTTATGATAAATTTAATTTAATCATACACATTATAAGCTGTCAAGCGATAAAATGGCTAAATTATAAGCTTATAGTGTTCGCCCGCCGTATGAGTTATGCTATACTGAATTTGCCGTCGGATGATGATGGGTGTAAAAAATACCTTTATTTTTGCAACTATTTAAAAACTTAATAAAATCAATAAGTTATAACTGGTCAATTTTTGATTGGGCAAAAAAGGTCAATCCATCATAAATGACTGTTATTTCTTAATTTTTTCAGTTATAATTACT # Right flank : ACGTGCGAGAAATCTTTGGCGAAAACTAGGCAAAACGAGTGGCAATGGTGCTACGGCATCAGTCGATGTTTTGATTCCACGCCTTGACTGCTGCCATGATGATGTCTGAGCGTGATAAGCCTGTTTTGGCAGATAGCTCGGCAAGCTCGTCGATGAACTCAATCGGGAATTTGTAGCTTGCCACTTTGACACCACGCTTGGCATCAGAATCGGCTTGGATTTGTGAGCGGGTTTTTGGGGTTTTAACAAGTTTTGGCATCGTATCATCCTTAAAAGTCATACCACGCTAGTAGCGGACTACCCCGATACCGCTGGGGTAGTCGCTTGTGCTATTTACTTGACTTAACTGCTAGACTTAAGTAGAATACATAGCACAAGGATAATTGCGATTTGGATAATTCGTTTCATCGCAGTTACTCCTCTACTGGGTGGGTTTAAGTAAGGTTGTCAGCCTTACCACCTAAACAAGGCAGGTATTGCGAGTACTTGCCTTGTTGTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCATAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 181030-174957 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUYU01000009.1 Moraxella pluranimalium strain CCUG 54913 54913T_ctg_0000009, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 181029 32 100.0 34 ................................ CATTGGCATTACCATTCGATGACTGAGCATGTAT 180963 32 100.0 34 ................................ TGATAGTACTTATCCGTATAATTGACACAAGTCA 180897 32 100.0 34 ................................ ACGGATTTTAAGTTTGTACTCAAGCATCGCCATA 180831 32 100.0 34 ................................ CAGACTTCGATTGCCTTAGCCTTGATGGTGTCCC 180765 32 100.0 35 ................................ ATCGGGAACGGGTTCGCTGCCGCAAAGGCGATCGC 180698 32 100.0 36 ................................ ATCCTTTTGATGTGTTTATCCGACAAATCAAGGTCA 180630 32 100.0 35 ................................ CACGAAGCGATGGTGTTTTCATTTTCGCCGATGGC 180563 32 100.0 33 ................................ AGCGGTGAGATTAGCATCGGTGATATTTTTGCC 180498 32 100.0 35 ................................ ATAGTAGGCTCGCAAAGTCAACAGATGAGTACTCA 180431 32 100.0 34 ................................ TGCCAGTTGCCATCGTCTTTACGCCAACGCACTT 180365 32 100.0 33 ................................ TATACCTAAAAAGTAAAAAACACAATACCCAAA 180300 32 100.0 35 ................................ CGAACGAATTTGACAAGTGGAACAAATCTATCCAC 180233 32 100.0 35 ................................ TCAACTTACAACTTAGAGCGTGATTTAGAAACCCT 180166 32 100.0 34 ................................ ATTTTTAAACACCCAATAAAAAACCGCCTATCGA 180100 32 100.0 35 ................................ ATCGTTTGCTCCTTATTTTACCGCTGGTGCCAGTC 180033 32 100.0 33 ................................ TGACTTATTTTTGGCAGTATCAAGCGCATCTTC 179968 32 100.0 33 ................................ CCATGTGTAGCAGATGATTGGCATCCGCATATA 179903 32 100.0 34 ................................ ATCGTTTGTTTGCCATGCAAAAAGCCCTTGCAGT 179837 32 100.0 34 ................................ TTTGAGTCGCATCTCATACTCGAGCCGTGCTGGA 179771 32 100.0 34 ................................ TTGCCAAAGCTGATTTCGACTTTGTTTTTTGCCT 179705 32 100.0 34 ................................ ATAACAAGTCCTTAAGGTTGAATGAAAAAAAGCC 179639 32 100.0 35 ................................ ACAGTAATACAAGTCATCAATATGATAAACTTCAT 179572 32 100.0 34 ................................ ATACAAGTTGTGAAGTGGGTATTGAACGCACCTT 179506 32 100.0 34 ................................ TCCTGCATCTAGCCTAATCGGATAATTTTATGAG 179440 32 100.0 34 ................................ AGCGGTGATACTAGCGTCAAGCGCTATATCGGCT 179374 32 100.0 35 ................................ GACGCAATACTGACAATGCCTTGCCACGCTGATGA 179307 32 100.0 34 ................................ GACATGGTCGTCAACATAATCACAAAGCCTTCAG 179241 32 100.0 34 ................................ TATCCGCCATCGCTTTAGCCGTCTGATTAGCACC 179175 32 100.0 33 ................................ TTGTTTGATATTATATCATAGTTTTGATAGTCT 179110 32 100.0 34 ................................ ATATGGCGGGTGATTTGGATGCACTCGATACCGC 179044 32 100.0 34 ................................ CGTCTTACAACTTAGAGCATGATTTAGAAACCCT 178978 32 100.0 35 ................................ ATCATACTGCAGTTCGCCCGTCTCGTGAAACAAAC 178911 32 100.0 36 ................................ CCACCAGTCATCGACACGCTCAAAATCAGGCAAATC 178843 32 100.0 34 ................................ CTTGGCTTGCCAATATGCAAATCCATAATATCAC 178777 32 100.0 34 ................................ TGTACGGCGAGCGTGATGTTGGTGGCTTTATCGT 178711 32 100.0 33 ................................ ATATGGCGGGTGATTTGGATGCACTCGATACCG 178646 32 100.0 33 ................................ ATAGTCTTAGCTAATAGATGATGCAGGATAACC 178581 32 100.0 34 ................................ CTGTACGCAGAATTGATGGCGTACAGATTGAGAT 178515 32 100.0 35 ................................ TCACGCAATAGTGCAAGCTCACGAGCTATCCCTAT 178448 32 100.0 34 ................................ ATCACAATATTGAGCTAGGCTGTACAAGCTCCAC 178382 32 100.0 34 ................................ CATGAAAAGTTACGCATACAATAGACCCCCTTGT 178316 32 100.0 35 ................................ GCCACGATAACGCCCGCACACCGCCCAATGACAAT 178249 32 100.0 34 ................................ ATTAGCAATCACAAAATTTACGCCAAGGCTGATG 178183 32 100.0 35 ................................ ATACTCAAGCTCCATCAGTTCAAGCTTACCCTTGC 178116 32 100.0 35 ................................ ACGAAGGCCAGTATGAAACCTTTAAGAATGTGCAA 178049 32 100.0 34 ................................ AACGATGGCGAGCAGGATTGCTATATCCGCTCAT 177983 32 100.0 34 ................................ CCGATGAACATTGGCGCTATGGCGACGGTTATCG 177917 32 100.0 34 ................................ GTAAAAAAGTCTGTAAGTCTTTGATTTGCCAAGC 177851 32 100.0 35 ................................ ATTTAAAATCAAGCCCTTGCAATGCAGGGGCTTTT 177784 32 100.0 39 ................................ TACTGATTGTAAAGTTATGTAAAGACAGAAACAAAGGCG 177713 32 100.0 34 ................................ TATACCCAGTGTAGCGTGATAACGCTGTACTAAC 177647 32 100.0 33 ................................ ATATCCTAGATTTATATAATCTACTCGTTTCTG 177582 32 100.0 35 ................................ ATAACTTTATGATTTTGCAAGCATTTTTTATTGAG 177515 32 100.0 34 ................................ CTCACTCGCACAAATACCGCTCCATTGCTCGATG 177449 32 100.0 35 ................................ CAAGTGCCTGACTTTGGCACGCTCATGATGCCGTC 177382 32 100.0 34 ................................ TGGTCTGGATAATTTTACTTGGAAAAGAATTGCA 177316 32 100.0 35 ................................ GGTTAGGTGCAATATCACGCCATCATAGTATATGC 177249 32 100.0 35 ................................ AGGTGCTTGGCTGTAGCCCGTACCCACCGTGCCAA 177182 32 100.0 34 ................................ ATCTACATTCCTCATGCGTTTCTTTACGCCGAAA 177116 32 100.0 35 ................................ CGCTAGGTCATCATCTAGGTATGTAAAGTAACTGT 177049 32 100.0 32 ................................ AAAAAAAGGCACACGGTATTTTCTGTAAGTCC 176985 32 100.0 34 ................................ ACCAACAAAGGAGTAATCCAAATGATTAATTTTG 176919 32 100.0 36 ................................ AATGTTACAGTATTGAAGACTTGTTGTTTACCCTAC 176851 32 100.0 35 ................................ AATCAGGCGAAGTAATACCCAACACCCTGTGCCGT 176784 32 100.0 35 ................................ ACCCGTGATGAAGTGTACTTAGACGGTGATGACAT 176717 32 100.0 34 ................................ CTAAACCCTTAGTAGCTACTTAGTAGCTAGTGAC 176651 32 100.0 35 ................................ ATCTTCCTGTGCTAGTAGTCGCAGGATTGTCTGCG 176584 32 100.0 33 ................................ ATTTAGTCTCCTTTGGTTAGATAGTAGGGGTGT 176519 32 100.0 35 ................................ CACAAAATCCCACCAAAAATAAAATTCCCAAATAA 176452 32 100.0 35 ................................ GGCTCTACGATAAGCTAGTTTGTCGTACTGTTTCA 176385 32 100.0 35 ................................ AAGCGGCATAAAAACTAAGCGTCCATCCTGATAAT 176318 32 100.0 33 ................................ CGTAAGTACGGCATGAGCTTGGCTTGTGCTGGT 176253 32 100.0 34 ................................ AACCCAATCATTATACTGACTGACGAGCTGACCT 176187 32 100.0 36 ................................ GTGTATTCGCCGTTTAAAGCTCGCAATCGCCATACC 176119 32 100.0 32 ................................ AGCCCATTGGTCGCACCCAATGGGCTTTTTGC 176055 32 100.0 35 ................................ TTAAGATTTTTCGCAAAATCCTGCGAAATTTAGAA 175988 32 100.0 34 ................................ AAAAAAAGGCACGCCATTATTTTTAAAAAGTCAT 175922 32 100.0 36 ................................ ACATGACCAAAACACCCCTAGAGCAAGCCTTTGCCA 175854 32 100.0 34 ................................ GCAGCAGCAAAGGCGATCGCCTGCTGAATCGCCA 175788 32 100.0 33 ................................ ATTTTATTAACTCCTATTTTGTGTTTTGGGGGC 175723 32 100.0 36 ................................ CATTTTTCGTGGGGTCGGCGATGTCGGGGGGGTAAG 175655 32 100.0 35 ................................ CGCACGAACCAACCAACAAAACCCAAAAATCTCAA 175588 32 100.0 33 ................................ GTAACAAGCTATTATCTAGGTAATACAAAGGGC 175523 32 100.0 35 ................................ GCTTGACTACCACCACGCCCCAATCTATAATACAC 175456 32 100.0 34 ................................ ACCCGTGATGAAGTGTATTTAGACGGTGATGAGA 175390 32 100.0 35 ................................ GCCCCATCCATGCTCGAAGCTGACCACATCATCAA 175323 32 100.0 35 ................................ CATTTTAACCGCCTTAATTGGCGGTTTTTTCACGC 175256 32 100.0 35 ................................ ATGTGCCTGCCTTTAAGGTAGGTCTAGGCACGATA 175189 32 100.0 35 ................................ ATATCGCCTTTGCCCGCTTTGGCATAGATCATAAA 175122 32 100.0 35 ................................ ACTTTCTGAAGTGATAGATGCACCATCGTTCAGTT 175055 32 100.0 35 ................................ CCATCGTCGTACACCAAAAATTGAAAATCTCGATA 174988 32 96.9 0 ..............A................. | ========== ====== ====== ====== ================================ ======================================= ================== 92 32 100.0 34 GTCGCTCCCCATGCGGGAGCGTGTGTTGAAAC # Left flank : TTATCCACCATTTTTGATGAGATAATCTTATGATGATGTTAATTACTTATGATATATCGCTAGACGATAAAGCGGGAGCGAAACGACTTCGCCAAATCGCTAAGCATTGTCTAGATTATGGCGTGAGAGCGCAGTATTCAGTATTTGAATGTGATGTAACGCCCGATCAGTGGGTGGTTCTTAAGAATAAATTGCTAAAAACTTATGACCCAAAGGTGGATAGCTTGCGTTTTTATCATCTAGGAAGTAAATGGCGACGCAAGGTGGAGCATCATGGAGCAAAACCTGCGGTGGATGTCTTTCAAGATGTGCTGATTGTCTAATCGCTAATGGGCGGTTGTCATGGATTTGCCGGAGGGTTGGCGATGAGCTAAGCCTTTGAATTATTTAACAATTGAAAACAAAAATAAAATCATCTACAATAAGGATGTTTTTGGGGCTTGGCTTTAGCGATTTTGTTATCGTCAAGCCTTGAAAATACTGCCATTGCAATGATGGCA # Right flank : GCACGTCACGTCAGTATTATCAAACGTCCCACAAAGTCGCTCCCCATGCNNNNNNNNNNNNGAGCGTGTGTTGAAACACCAAATCTGACACGCCAAAAATATATAACGCTTGTCGCTCCCCATGCGGGAGCGTGTGTTGAAACTCGAGCGGTACAAGAAACACCTAGCCAATGAGTTGTCGCTCCCCATGCGGGAGCGTGTGTTGAAACATCGGTACACCGCCTTAGCAATGACGATTTTTTTGCGTCGCTCCCCATGCGGGAGCGTGTGTTGAAACTTCTTGGCTTTTTCCTAGCTGTTTTAATGCTCGCGTCGCTCCCCATGCGGGAGCGTGTGTTGAAACATCGCATCGGCTGTCTGCATGACTGAGCCTAGACGTCGCTCCCCATGCGGGAGCGTGTGTTGAAACCCCATGCCAAAGGTCAGCACGGGATTATTGTTGTGGGTCGCTCCCCATGCGGGAGCGTGTGTTGAAACCTCACTAAGCATCTGTGCGTGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCATGCGGGAGCGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.90,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //