Array 1 269520-271101 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXF01000003.1 Schlegelella thermodepolymerans strain DSM 15264 Ga0310501_103, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 269520 37 100.0 30 ..................................... CGTCGCCTGTGGGAGGAGATCCACGGCGGA 269587 37 100.0 30 ..................................... GATGCCGTCCAGCTCGTCCGCCCACGTGGC 269654 37 100.0 30 ..................................... CACATGGCCGTAGGCGCCGCGCGTGACCTT 269721 37 100.0 30 ..................................... AGTCCCACCAGCGCGACTGCGCGGCGTCAT 269788 37 100.0 30 ..................................... GAGCCAGCCGACGCCCGGTTCGTGACGATG 269855 37 100.0 30 ..................................... CCGCCCGCATCAGCGTGATTCCGCCCGTGG 269922 37 100.0 34 ..................................... ATCCTCTCAGGCCGAAGCGTGCGCCGCAACGTGC 269993 37 100.0 30 ..................................... ATCCCTGCTGAAGTGCACGTAGCCGGGCCC 270060 37 100.0 30 ..................................... CCCAATGGCCTGGCTTGGAACGCGGTGGCC 270127 37 100.0 30 ..................................... GGGTTCGACATGCAGAATGCGCTCGCCAGT 270194 37 100.0 30 ..................................... AGCGGGTTCAAGGGTCATGGATTCCTCCGG 270261 37 100.0 30 ..................................... CATCATCGGCTTGCTAGGCAGTCTGGTGCA 270328 37 100.0 30 ..................................... CGGTCGATCTGGTCCTCGTCGACGGCAAGC 270395 37 100.0 30 ..................................... TGCTCCAGCTCCTGGTCTGGCATGTCGGCG 270462 37 100.0 30 ..................................... TCTCCTGCAGCACCTCGTTGACAACCTTCT 270529 37 100.0 30 ..................................... CCAAGACGCGGCGGTTGATCTGCTCGGCGA 270596 37 100.0 30 ..................................... CCGCAGGTGTAGGTCGCCAGGCGCTTGCCG 270663 37 100.0 30 ..................................... CGAGGAGCCCGTCGTGCACCAGGGGCGCCT 270730 37 100.0 30 ..................................... GACGCGCTCGCGGCGGTGAACGCCAAGTTG 270797 37 100.0 30 ..................................... CGAGGGTGGTGTGGCTGCCTTCCTGACGTT 270864 37 100.0 30 ..................................... TTATGTGGTCATCGCTGTTTTGGGGGCGCT 270931 37 100.0 30 ..................................... GGTGGTGGCCCAGGTACCAGCGAGACGACG 270998 37 100.0 30 ..................................... CGAACTCCTCGGCGGAATTGATGCCGCCAT 271065 37 97.3 0 ..................................G.. | ========== ====== ====== ====== ===================================== ================================== ================== 24 37 99.9 30 GAGTGTAGCTATCCGGGGTGAGAGAGGAAGCTACAAC # Left flank : GGAGTCGCTGGTTCGAGTCTATGAAAGCGGCGTGGCCGCTGCCTTGGAACTGCCTGTGGTCATAGGACTTCGACGTCACCGCGCAGAGATGTAGCAGGAACAACCATGGGGCTGGACACGAGGCGTCACATGCGGCTGTTGGTGTTTTTTGATCTGCCCGTGACCACCCGGGCCCACCGAAGAGCATATGCTCAGTTTCGTCGATTCCTCCTCAACGACGGGTACGACATGGTCCAACTGTCAGTCTATGGCCGGGTCCTGAACGGCCATGATGCGGAGGAGAAGCACCTGCGACGCTTGGTGGCACACCTTCCATCGGAAGGATCCATTCGCGCTTTGACGGTGACAGAGAAGCAATACGCCAGCATGAAGCTTCTGATCGGAACCCCTCTTTTTCAAGAAAAGAAGGTCGCGGCAGACCAACTCATCCTCTTCTGACCGATTTTTGGGAAAAGGACACCCGCACCAAGCGAAGCCTGGTGCGGGTTCCCGTCGAGCCA # Right flank : CATGACGAGGGGCTGGTGCACTCGGTCCATCGCAGGCAACACTGCAGCAGCCCTCGTCGAGAGCTGCTCGGCCACCGCCCGACGCCTCACTGGAACTTGCGCTCCGCAGGCGGCGGCGGGTCCCACTGGTACAGCCAGGTCTCGGTGAGCGGCTGGCCGTCGCATTGCAGGTACAGCCGCAGGTCGATCGGCCGGGTGCTGTCGTCCAGCGGGCGCAGGTCGAACATCGCGCGCCATCCGTTGATGGCGTGCAGCGGCCGCGCGGACGTGATCTCGATCTGCCCGCGCGAGGCCCAGATCACGGGCTCGACCTTGGCGTCCTTGCCGATCAGCGACAGGTCGCCGCCGGCGAAGTCCACCGCGAAGCGCCACGAGAAGTACTTGCGCGGCTGGCCGACGATGCCGCCGATGCCGGTGCGCGTGGCCACGCATTCGGCCAGCGGCGGCCGCGCGGGCGGGTGCGCCCCCCAGTAGAGGCGATAGCCGAACAGCAGCTCCTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTGTAGCTATCCGGGGTGAGAGAGGAAGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 48317-53590 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXF01000004.1 Schlegelella thermodepolymerans strain DSM 15264 Ga0310501_104, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 48317 28 100.0 33 ............................ GAGAAGATCGTCGAGCGCGGCCGCGACCCTGAC 48378 28 100.0 33 ............................ CGACACGTCCTACCTGATAGTGCTAGTGCCTGA 48439 28 100.0 33 ............................ TCACGACGGGCCATAACAACCTCGTCGATCGTG 48500 28 100.0 33 ............................ CGCCGTCAGACACGGCGGCCGTACTTGCGCAGG 48561 28 100.0 33 ............................ GAAGCACGCGGTGTCCACCTGCCGCTCCCACGG 48622 28 100.0 33 ............................ CTGCGCGGGCAGCTTTTTGACGCCGTGGCCCTG 48683 28 100.0 33 ............................ CCACAAGCACGAGATCTTTGTCCGGGAGTACCT 48744 28 100.0 33 ............................ TCCACGTCCTCGGACGCAGCAGGCCGCGCAACA 48805 28 100.0 33 ............................ TGCTCGGGTTTGGCGACCCGGTGCGCCTGGCGA 48866 28 100.0 33 ............................ CGGTGCTGCCGCCAGGGACGGGGAAGTAGCACC 48927 28 100.0 33 ............................ CCGAATCGGTTTCCGAATCGGTTAACGAACTGG 48988 28 100.0 33 ............................ CACGAACTGCTGTTGATCGTGGTGGCGCATCCC 49049 28 100.0 33 ............................ TCGCCCTTCGTCTTGGTCTTGCCGTAGCCCCAG 49110 28 100.0 33 ............................ CAGTTCGAGGGCCGCGCTGCCCATGATCACTTC 49171 28 100.0 33 ............................ CCATCTCCGGCGTCTCCACGTGCTTCGAGAAAA 49232 28 100.0 33 ............................ TTGTGCGCCCCCTGCCCGCCCATGACAATGAAT 49293 28 100.0 33 ............................ CTGCACTTCGAAGCCGAGGTTCGGGCGCGGGAG 49354 28 100.0 33 ............................ CCCCGCTTCCACGCCGGAGGGCAGGAACAGGCA 49415 28 100.0 33 ............................ TCGAAGCGTCGTGCGGGCTGGCTTCGCTTCCAG 49476 28 100.0 33 ............................ CGCCACGCAGGCCGCGATCCGTGCGGGCTACAG 49537 28 100.0 33 ............................ CCCGTTGACGACCTTAAACCGATGCTGCCAATA 49598 28 100.0 33 ............................ CTACGTCGAAATCTGGTTTGCCGACAACGCGGC 49659 28 100.0 33 ............................ TGCGCGCGACTTCGAGCCTGGTAACTGCTACTG 49720 28 100.0 33 ............................ CGGCGAGCTAAAGACTCAGCCTGTTCGGATCGT 49781 28 100.0 33 ............................ TCCCGAAAGGTGAAAACCCGGTCGGTGCTGACC 49842 28 100.0 33 ............................ CGTCCGTTTCGTGCCCCTGCGCCCGGACCTGGA 49903 28 100.0 33 ............................ CCGGTGCTCGAAAGCCTTCTCCTCCTCGGGCGT 49964 28 100.0 33 ............................ CCTTGTGCGGTTCCTGACGAACTGGCTTAGCCG 50025 28 100.0 33 ............................ CTCGGACCAGAGCATCAAGGGCGACTGCGTGGT 50086 28 100.0 33 ............................ CTGGACCTTTGCCGTGGACAGCCGCGAGGTGCG 50147 28 100.0 33 ............................ CGCCTTGGAACGCCAGCCAGGCCCCGCGAACAA 50208 28 100.0 33 ............................ TCTCATGCTTGTGATTCTTCAGCTCGGCCATTC 50269 28 100.0 33 ............................ TCAAGCCTGGCGACAGGTTCGGGTTCCTGACGG 50330 28 100.0 33 ............................ GCATCCAGACCGAGCGCGAAGTTGAGCAGCCCG 50391 28 100.0 33 ............................ TGGAGCGACATCATGCTGACCCTGACCATCAAA 50452 28 100.0 33 ............................ CCAATGGCGCGTCAGGTCGATCGCGGGGCGAGC 50513 28 100.0 33 ............................ GCAAATCGCATTTGCCAAGACCTGCATCGACGG 50574 28 100.0 33 ............................ CGCCCCAATGGCCGTGATCAACAGGCCGATGGG 50635 28 100.0 33 ............................ TTCATCCTCAAGGCTGGTGATGTATTGCGACTC 50696 28 100.0 33 ............................ CTGCTGGCCCTGATCGGTGACGCTGTGCGCGAC 50757 28 100.0 33 ............................ TGGCGCCTACCACTGGGCGCTGGACCACGCACT 50818 28 100.0 33 ............................ CCGCGCGAAAAAAGCGATCGGCGACGGCACCAT 50879 28 100.0 33 ............................ GCGGCCGTGGCCGTGGCGCCGGGGGTGCTGCTG 50940 28 100.0 33 ............................ TTCCAACCATCATCACCACCCGACACGAAGGAG 51001 28 100.0 33 ............................ CGCCTGACGAGTTCGCCGGCATGAAGGTGCTCC 51062 28 100.0 33 ............................ GCAGTGCAAGTTCTGCAAGGCCAAGGCCACTTG 51123 28 100.0 33 ............................ CTGAGAGTACACCAATGACACGCATGACCACCG 51184 28 100.0 33 ............................ CGGCCTGGTGGCCAGCGCCAGCAAGCGCGACCA 51245 28 100.0 33 ............................ CGGGCCGCGCTGCGCCGCCGGCTGGTCGAGAGC 51306 28 100.0 33 ............................ CATGCCCCGCCCCGACATCGGCCTGGTGGCCGA 51367 28 100.0 33 ............................ CGCATCTGTGCCCGCGCGAATCGTCAGGGTCGA 51428 28 100.0 33 ............................ CTACAGCCTGGGCTGGATTCCGTTCAAGACGCG 51489 28 100.0 33 ............................ CCACACCCGCACACCTGGGCGGCGTATCACCGG 51550 28 100.0 33 ............................ CGGCAGGTCAGCAATGAGTTGCGGCCAGGCGTG 51611 28 100.0 33 ............................ GTCCTTCTACCTGGACGAGACCCGCCCGCTGGG 51672 28 100.0 33 ............................ GTTTTTGCAATTCCGCAACGCAACCGGGGCAGG 51733 28 100.0 33 ............................ GCACCCATGATCTACCGAAGCCGACGATTTGAT 51794 28 100.0 33 ............................ CGGTGGCGACGCCGATCAAGGCGTTGTCCGCGT 51855 28 100.0 33 ............................ CGACGCCAGGCCGCCGACCACGCTGCCGATCAA 51916 28 100.0 33 ............................ CAGATCACCAGCCTTGAGTACGGCTACGATGCG 51977 28 100.0 33 ............................ CACCCGCGAGGAAGCCGAGGAAAAGCCGACCGT 52038 28 100.0 33 ............................ TCTCGGCGGCCTGTGCGGCGATGAGGTGGGCGA 52099 28 100.0 33 ............................ CAATGAAAGTCTTGCGGCACGCAACCTTGTCCG 52160 28 100.0 33 ............................ GCAGCCATCATCGGGCAGGCCATCGGGCGCAAG 52221 28 100.0 33 ............................ CCTGAGTCTGTCCGCCTGTGGCGGGAATGGACG 52282 28 100.0 33 ............................ CCTGGTCGACGCGAACCTGATCGGCGCGAACCT 52343 28 100.0 33 ............................ CGCGCTATCACAGAGCGCGACGGATCCACTTGT 52404 28 100.0 33 ............................ CTCAAGGCCGAGAACAGGCCCATTCCCTGGGAG 52465 28 100.0 33 ............................ CATGGTGTCCAGCAGACGCATGCGGCTCCGACG 52526 28 100.0 33 ............................ TCCGCTCGGCAGGCGGCACGTCGGTCGGGTCCG 52587 28 100.0 33 ............................ CGAACGGCTGGAAGGCCGCATGGATGCGTGGTG 52648 28 100.0 33 ............................ CGACGTCATCCTCGACCAGGGCATCCTGTCGGT 52709 28 100.0 33 ............................ CGAGGTCCCACCACCTGGGATCGTCAAGATCCA 52770 28 96.4 33 .............A.............. CAGGCGGCCTTCGGCGCGCGCCTGCAGGACCCA 52831 28 100.0 33 ............................ CAGCAGTCTCCAGGAGTTTCGGTGCAGGCCGTG 52892 28 100.0 33 ............................ CCGCGCGGAGGGCAAGGAAGAGAACTTGCGCTT 52953 28 100.0 33 ............................ CCGGCGGCGAGTCCTTCCCTGCGCCATCTCCTT 53014 28 100.0 33 ............................ CCAGATCCTGCCAGGCAAGCTGCGTGTGTCCAA 53075 28 100.0 33 ............................ TCGACAGCCCATCCGCGAGGCCCACACCGCGGC 53136 28 100.0 33 ............................ TTGTTCGAGTCTGGTGGTAAGCAGTACCTGCTG 53197 28 100.0 33 ............................ TGCGATGGACAGGTAGCCGTGGCGGCCATGCAG 53258 28 100.0 33 ............................ CTTCTTGCTTGTTCTCGCAGCCCAACCAGGGCG 53319 28 100.0 33 ............................ CGCGAGCCGATCGCGCCCCCACACCGCGCGCCA 53380 28 100.0 33 ............................ TGGCATGCGAGTGTGCATGCCGGTCGGTCCCGA 53441 28 100.0 33 ............................ TCGAGCGGTCGCGGTCTGCCGGCGTGATGGTGA 53502 28 92.9 33 ....................AC...... CCAGTACGAGGCCCGGTGGACACCGCGGCCGTC 53563 28 96.4 0 ............C............... | ========== ====== ====== ====== ============================ ================================= ================== 87 28 99.8 33 GTCTTCCCCGCGTGAGCGGGGATCGACC # Left flank : GCTTCCCCTCGCCTTCGGTGCGGTTCGTGCCTGCCAGGACGGCAAGGCGGACAACCTGGAGCGGGAAGTGCGACGCCGGGCAGCCAGGCTGTTCCGGCAGGAAAAGCTCATCCCTCGCATGATCGACAGGATCAAGGAGCTTTTCGATGTCGATGACCGTGGTGGTGACGCGTAACGTTTCCTCACGCGTGCGAGGCTTCCTCGCCTCGGCCATGCTGGAACTCGCCCCCGGCGTGTACAGCGCGCCTCGGATCTCCCCCGCCGTGCGGGAGCGGGTATGGGACGTGCTCAAGGAGTGGTTTCCGAACGAGCACGAGGCATCGATCATCATGATCTGGCAGGAACGCGAGATCCCTGGCGGACAGGCCGTTCGTACGCTCGGCAGCCCGCCGATCGAGTTCGTGGACGTCGATGGCCTGGTTCTGGCACGTCGACCGGCGCCCTCGGCCGCTCCTTAACAAGTCAGTTTTCTCTTTGCAGTCAAGAGGTTAGACTGGAGA # Right flank : CCCTTGCCTCAAGGGCTTCGACCCCCAGCCCCGCCCCCGTGGGGCAGCCTTGTACCGGCAGAAAATCGGCCTTGATCTTGCAACCACGATCCCGCCCGCGCCAAACCGTAACCCCGCGCGCCTGAACACCCCGCGCCGGAAACACCCGGTTGCGCAGTGGACTGCATTTGTCAGTGGCAGTTGACGAATTGAGGCAGGACCGACGCATTCCTGCCGGAGGGTCACACTTGGAACGCACGCATATCGCGCACAACGACATCCGGCGCCGGGGGCGCCATGCGCTGCTGGCGCTGGGGCTCGCCGCGCTGCTGGCCGCCTGCGGCGGCGGGGGAAGCGGCAGCGGAAGTGACACTGCGCCTCCGCAGCAAGGCGGCAGTGGCGGCAGCGGTGGAGGCACCGGCTCGGGCAGCGGGCTGCCGCAAGCGCAGCCGACCACGCTGCGCGACGCGGTGCGGCTGGCCGACCAGGCCAGCTTCGGGCCGACCGAGGCACTGATCGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCGTGAGCGGGGATCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //