Array 1 277676-276991 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIKC010000006.1 Paenibacillus sp. SYP-B3998 NODE_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 277675 30 100.0 34 .............................. GTAGTAAATGCAGCACGTGTATCATACGCTAAAG 277611 30 100.0 35 .............................. ATGGTCGCCGGAGGAAACAACGGTCGCCGAGCTGA 277546 30 100.0 36 .............................. TACCCGCGCGAAAAAGTTCCGCTAATCCGCTCAGGG 277480 30 100.0 35 .............................. ATCAGTGCTGGAGCAACTTTTCTAAATCAATTTGG 277415 30 100.0 36 .............................. AACCGTTGGCAATAGCCATGAGTAAGTGAGTTTTCC 277349 30 100.0 35 .............................. ATGTAAGTCGATTCTTGACTCGCGCCATAAGTTGA 277284 30 100.0 36 .............................. AGCACTCCGTCAGCGATCAGGACAACGTCTCCGATT 277218 30 100.0 37 .............................. ATCAGTCCCGCCCGTTCCAGCACCAGTACACCATTTT 277151 30 100.0 35 .............................. GAGTGAGCAATGAGGATAGTAACATATATATTATT 277086 30 100.0 36 .............................. ATGCTTATGGACGATTATAATAATCGGCTAAATAAG 277020 30 90.0 0 ............T..........A.A.... | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 99.1 36 CTTTAACCGTAACACTAGGTGTATTGAAAC # Left flank : ATGCCAAGGCCTGATCAATATAGACTTCCCCTGTGTGCCAAACATGAATTTTCGACATGAGACATTCCTCTTTTCGCATTAAATTAAATGACACGTCATTTATTGTCAATGCTAATTGACCCATGATTTGTATGAACATTACTATACCCGAAGATGGTAGGTTCACAATGTTTGTTCGATAAATACAAAAAGGCTGTCTATGTAATTGACGGCCTTTTTGTGTTCATAACGGGTAGCATAGCTCTTCCGTTTTATTAAATAGTAGGAGTAATCTATCGATGGATTGCCTGAGACCTGACAGGAATCGATGCTGTTCTAGCGAATTTTTCCCAACCGTTGACGATGGACAACAGGGGATGAGCCTTAGAGCCGAATGGCTTGGAGGGGAATTGGGAGAGTTAATTTTCTAAAATCAATTTCGGTTGGGAAAAAATTGAGAAACCCTTGCGGCTGTAGTATTATTTGACTATAGCCATTTTGAAAAGCTTGATTTTACTGCC # Right flank : ATTGCAGGGAAACGATTAGGAATTTACTTTGTACACGCCGAATGTCGAGCAACATCGACAGTGAATAATCCATTTTTCCTGCCATAATGATCTTGTCCTCCTATCGTGAGAAAAGAGAAAGGCGGTTTAGACTTTGGGATGTATGTCTCGTGGGGATTCTTATGGAGGACATGTAAAACTTCATATCAGGTTTCCGAGTCTCTATCTTAATATAATCCATAAAAAAGATTATTTGCATATAATTGTTAATCATGTAGTATGAAACTAGATTGGTCGGCTGCGCAGCTATCAAATCTAAAGTTAAAATTCAACTATTTATAATTTCCTATGAAATGGGTAATAGAAACCTATTATTGCTTACTTTAGTTACGGTAATTGGCCTTTCTGCAAGTATGAGCTCTGTTGGTTATGCTCAGAGCGAGAACAACGCTTCAGCTGTACAAAAAGCATTTAGTAATACAGCCAGTGCAGTAAAGTACGGAGATACTTTAACTATTTCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCGTAACACTAGGTGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.60,-1.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 281038-280015 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIKC010000006.1 Paenibacillus sp. SYP-B3998 NODE_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 281037 30 100.0 38 .............................. TTTCTGAATCAGCAGCATATTTTGTCTAAGCAATGGAG 280969 30 100.0 37 .............................. TATGTCGGAGCCTCTGGATTCCCTTCTATGGGTCCTC 280902 30 100.0 35 .............................. TTCATAAAGAAATCAATCAATTTTACTGCGTCTGC 280837 30 100.0 36 .............................. TTAGAAAACCTTGTTATTACTGGAAAAGTTGTTGTT 280771 30 100.0 36 .............................. AGGATTTACAAAATATCATTTTAGCAAATACATTTA 280705 30 100.0 36 .............................. AATAAAGATAGCATCTTTTTTTGCCGAGAATGTGGG 280639 30 100.0 37 .............................. CAAGGGGCGATGGTGATACAGAAAAAGGAAAATTCGG 280572 30 96.7 36 .....G........................ AAGCAGAATCACGCGTAATGAGCGCCGTTGAATCCA 280506 30 100.0 36 .............................. TTGCCTATTCCGGACTTATTTCTTGTTACAACAACT 280440 30 100.0 35 .............................. TCAGGTAAAGAGTCCGTAATGCTGCGAAGCTCTGC 280375 30 100.0 36 .............................. TCGAGTACATTCAAGCAGCGAGCGAAGCTACTCCAG 280309 30 100.0 36 .............................. ACCGAAGGGGCGAGAGCATTATTTTTGTATTGTTAA 280243 30 100.0 35 .............................. GGCTAAAATTCACGACTTAGCTAATGCTCAGCGTC 280178 30 100.0 37 .............................. TTCACGGTCGTTTCGGCTGCGAGAGTACCCGCATTCG 280111 30 100.0 37 .............................. TTCTTCGATGACTGTTACTCCCCTGAAAGGTCTGCTC 280044 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 16 30 99.8 36 CTTTAACCGTAACACTAGGTGTATTGAAAC # Left flank : TGGAAAAAGACCGGAAATGAGCTGATCATTCATGTCTAAAGGTAAAAATTATAACTATGTCATCTTGGTCTATGATATTGGCGAAAAACGTGTGGGCAAAGTGTATAAAATATGCAAGCAGTATCTGGTTCCGTTCCAGAAGTCAGTCTTCCGTGGGGAAATTACGCCTTCAAACCTAATCGCGCTTAGAGCTGCTTTGAAAAAAGTAATTGATGATAGCGTAGATTTCGTAGCTTTATTCAAAATGACTGGGGACTATGTTTTCGATGAAGAAGTGATTGGAGTTCGGTTGCATAATCAAGAATCGATGCTGCTCTAACGAATTTTTCCCAACCGTTGATGATAGACAACAGGGGTTGAGCCTTAGAGCCACATGGCTTGGAGGGGGATTGCGAGAGTAAATTCCCTGAAATCAATTTCGGTTGGGAAAAAATTGAGAAACCCTTGTGGCTGTAGTATTATTTGACTATAGCGATTTTGAAAAGCTTGATTTTACTGCC # Right flank : TCTGGAATGCTATCCATAAACGCAATTGCTCGTTTTCTTTAACCGTAACACACGTAATTCCGGTCTTGTCTTTTCGTGGAAGTTAACTAATAAAATTGGAGTTGAAGTTGTCAAATGCATCATCACTCTTTTTATGGTTATTTAGTTTAGCGTTCTATCTCTTTATTTTTAAGACCTTTTGCAAGTGATTTGTCTGATTCTAAATATCATCGGCTAACTTCCGCTCTTCAACAAACCAAACAACATCCAATCCTTTTTCTCGAAAGAAACGATCTCTTTTTGTGAACTGTGTAAGTGTTTTTTTGCCTCCGATGTCATGAACGTTCGTAATAATATTGATAGCACCCCTATAACGAAAGAGAGTATCAAGAAGAGGATAGAGATTTGCCCTTTTGAAAATGAAAGAAGCAATCCACCCGGCCCTCGCAAAGCAGGTGAATTGCTTCTTCAGAATGATCATTGACCTTCGCATCCGCCCAGTTAATGCAACTTTCTACATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCGTAACACTAGGTGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.60,-1.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 3 291375-291150 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIKC010000006.1 Paenibacillus sp. SYP-B3998 NODE_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 291374 28 100.0 39 ............................ ATTCTTCCGACATTTCTGGTTCAAAATGTTTTGGTGCCT 291307 28 100.0 37 ............................ CGATTTCGTATGTCGAAGTCGATTCGATGGAACGTAC 291242 28 100.0 38 ............................ ATGGATTGCGGTTCGAGGACGTGTGTATAAGAGAGTTT 291176 27 78.6 0 .........G..C..AG...T..-.... | ========== ====== ====== ====== ============================ ======================================= ================== 4 28 94.7 38 TTAACCGTAACAGTAGCTGTATTGAAAC # Left flank : ATATTTTTCACTAAGAGCATTAAACAGACGCTTCAACAAATACTTCCTTGCAATCACCACAAATAATATTAACGGTCTTTGAGGACCGAACAGGGGCCAGACATCCAGGGCAAACCCATTTAATAATATGTGTTTTTTTCCTTCTGGAAGAACCGCGGGGACCTGTTCCTTCGTTCTCCTCTGACTCATTTCTATCCGGTGTAGATTGGAATGTTTTCCTTGCTATTTGAAATACACTTCGGTTTATGGAGAATGCATCCATAATTCGCTTTGTTTCTTCAGTTATTTTAGGATATGCCCATCCAATTTTCGAATCCGGATCAGGGTCTGGATAATAGAATCCTCGTTTTAAGCACTCTTCTTTAAATCTCTTGTTATGATAGGAGCCATTGCGCGATGTATCTTGAATCCCTTTCACTTTACAATACAAATGAATCATTTCATGTAGCATGGTGTCCATCGTTTCGTAAAATTCAATATTTAAAAATTCAGCAGTGTCT # Right flank : TGTCCTGAGCCATTGACGTGACCACTAGAAAAACTAGTATAGAGACTTAGCCCCACCAATGAACTTTGATTTTGAGTATGTTTCTATGAAGATTGCCCTTATTAGGGATTTTATGGTATTATGTTCAAGGAAGGGATGGGAAGTATATGGTAAAATGGAAAATAGTTTCTGCAGTTATTGTAATTAATGGGTTGCTTTACACCAGCGCATTTGCTAATTCAGCAAGCTTTACAAATTTAGAAACAGCGAATTGGGATCATCCATCCAGTAGCGAAATAGTAACTTCTAAAGTTGATAAAAAACTTTTATCGACGAAAACGACGATGAAATGGACCGCTGATAAAATTGGAGAATTTCAAAGTGAAGATAAGTACAAACAATTTTTTCCTGCTCTCGTGTATAAAGTGGGAAAAACTGATGAGTTAAGATCCAAGTTAATGTATACAAATTTACCGGGCGCCAAATTCACAAGGAAATATGCTGCTTATAATCAAGGGGAA # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:0, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTAACCGTAACAGTAGCTGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 4 295081-294719 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIKC010000006.1 Paenibacillus sp. SYP-B3998 NODE_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 295080 30 100.0 36 .............................. CACGATGGGCGACTTTGATTGGGAACAATCCCTCTG 295014 30 100.0 38 .............................. TAGGAAGCGACCTTCCCCCGTAAAATAATCCATCGCTA 294946 30 100.0 36 .............................. TATTTAGCGAACGATGCACTCGCTTTAGAGAAACCG 294880 30 100.0 36 .............................. CCTGCAAAAGCTAACGTAGCAGCAGGTCTGACAATC 294814 30 100.0 36 .............................. TCTTACATACCTCCTTTTAAGAGTCGCAACTCTAAG 294748 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 6 30 100.0 37 CTTTAACCGTAACAGTAGCTGTATTGAAAC # Left flank : ATGGGATTTTATATCGGTATCACGGGTTGGATTTGTGATGAGCGCAGGGGCAAGCATCTGCGGGAGCTGGTGAAGCGAGTTCCACTGGATCGCCTAATGATTGAAACGGATGCTCCGTTTTTGACGCCTCGGGACTTAGCTGTAAAGCCGCAGGAGGGACGGAATGAACCAGCTTTCCTTCCTCACATCGCCAAGTCAATTGCGGCGTGTCTTGGGAAAGCTCCAGAGGAAGTGGCGGAGGTAACGACGCGCACGGCGAAATCGTTTTTTGGATTGCAGTGAGGTAGGTGGGAGAAAAGGTATAAAGTAGAGAGCAGGAAGATTTTTTCCCAACCGTCTTCGAGTTGGATAATGGCGTTAGCCTTAGAGCCGTATGGCTTTAAGGCTATTTTTTGTGGGATAACCTGAAAACCTGTATTCGGTTGGGAAAAATTGGCCAAAGACTTGTGGCTGTAGTATTATTTGAATATGGCTATTTGGAAAACCTTGATTTTACTGCC # Right flank : CCATTAATCAACGGCAAGTGGCCAACTACAATTGAACTTCACGATCAACACCAGCCGAGAGCCACGAGCCGATTATCGTCATTGACTTTGAGCCAACTCTCGAAAAATTTTGCATTGATGGTAATCATCGTGTTTTTAAAGAGTATCTCAAAAATCCTGCTGGGGATATAAAAGGATACTTGTTACATCCTTCTATCCATCAAAGTGCAATGGCAGATGATGCATTCCGAACGTTATATCAGATGAATGAAAATCTTACGATAATGCTAAATTATATGGCTGGGATTATCGACTTATCAATAGCCAAGAAGCGTTTTTATCACTTATAGGATAACTAGCATATCGGCAAATGGCAGTACACAGAATAGTATATATATATCAACGGCGATGTCGAGTCTGTCAAAGATGGCATTCAGAAATAAATTCGATACAACAAACGTCTTGCAGAGAGTTCGTGAGAATGCTAGAAAAGTTAACAGAAGAATAGGGAATGATGCTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCGTAACAGTAGCTGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA //