Array 1 100833-98682 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZOC010000006.1 Citrobacter portucalensis strain SC2-6 NODE_6_length_309759_cov_141.699799, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================ ================== 100832 29 100.0 32 ............................. CGCACCTTTAGCATACTCATTACGCAACACCT 100771 29 100.0 32 ............................. GAACGATGTAACCGATATCGCCGATGACGTGT 100710 29 100.0 32 ............................. CGACTTACATTCGCTGAAATATGCGCCGCAAT 100649 29 100.0 32 ............................. CCGCGTTTACGCCGCGCTGGAGCGCCTGGGAC 100588 29 100.0 32 ............................. ACTGGCAATTCATCACCGGTGCCGATTTCGCC 100527 29 100.0 32 ............................. TTTTACGCCGAGCGAACGCTGAGGTTTACTCG 100466 29 100.0 32 ............................. GTGGATACCCATCACGCGGGTGAGGGAAGAAG 100405 29 100.0 32 ............................. AATATGATAACGGTTCTCATGTTCTTACCGCT 100344 29 100.0 32 ............................. ATCACGGACGTGATCGCCCTGTTTTTAATATG 100283 29 100.0 32 ............................. CCAACATCTGTTAGGCACTGCTGCTGATATTG 100222 29 100.0 32 ............................. GGGGAGTGATGGAAACGCTCATGATCATTCAG 100161 29 100.0 32 ............................. CGCTCCTCGGCATCTTCCAGCGCCTGCCCGGT 100100 29 100.0 32 ............................. TGGATGGGCTGGAGTCCGGCCTATGCGAAGAA 100039 29 100.0 32 ............................. ATTTTACGTCCGCGATGCAGGGGCTGGAAAAC 99978 29 100.0 32 ............................. CGCAGGAGTCAGCTGTTAACGCTCTGGGGAGA 99917 29 100.0 32 ............................. GCGCTCAGCGTTGTAGGGGTAGCGTTACCAGA 99856 29 100.0 80 ............................. TTAGGGAGAGAACTAGGGTACTCACAGACTAGGTGTTCCGATAAACCGTTTTATGCGGCCGTTTAAACAGGCTTCATGGC 99747 29 100.0 32 ............................. CGCGCCAACCAGGACAGTTTCTGGCGCTCAAA 99686 29 100.0 32 ............................. TAATCGCAGACGTCGAGATCAACGGCAAGCAG 99625 29 96.6 32 .....G....................... GGCATGGCTTCATTTTTACTGCTTAGTTAATT 99564 29 100.0 32 ............................. CACAGAGAGGGATATAACTATTTCGCGCTACA 99503 29 100.0 32 ............................. CAACGCGCAGATGTTCGAAATCGACACATCAG 99442 29 100.0 32 ............................. CATCGTACTGATGTTTTTATTGATGTTGCGCG 99381 29 100.0 32 ............................. GCTATCCGCACTGCACCCGAGAGCTGAAAGAA 99320 29 100.0 32 ............................. TTACCTCCGAGGGCTTTCACTATATCGGTGGC 99259 29 100.0 32 ............................. AGACGGAGCGCCTGATAGAGCAGTCAATGTCA 99198 29 100.0 32 ............................. AAACACCCGGACACGCTCGACACTGTTGTGAA 99137 29 100.0 32 ............................. CGCGGCTGCTTCTTCCAGATCATCACTTGAAA 99076 29 100.0 32 ............................. CCCGCCCACATAGGGAGGCGGTAACAGCTCAA 99015 29 100.0 32 ............................. CGTCCGTGAATATTTACGGGCGCATATTCGAA 98954 29 100.0 32 ............................. CGGGTGAAAATAAACCGCGTGCTGGAGGCGAT 98893 29 100.0 32 ............................. CCAGTGCGGCCAGTAGAATTGGGTTGCGTGGT 98832 29 100.0 32 ............................. GATACGCCTGAATTCGACGTTATCTCGCCTAC 98771 29 96.6 32 ...........A................. AATTTATCCGGGACTACAACATATCTCTTTAT 98710 29 89.7 0 ..........................GTC | ========== ====== ====== ====== ============================= ================================================================================ ================== 35 29 99.5 33 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATCGAAGATGTTCTCGCAGCAGGTGAAATCCAACCGCCGTTACCTCCTGAAGATTCACAGCCCATCGCAATCCCACTTCCTGTTTCTGTGGGGGATTCTGGCCATCGGATTAACTAACGATGAGTGTGCTAGTTGTTGTTACAGAAAACGTACCACCTCGCTTGCGAGGCCGACTTGCCGTCTGGTTGCTGGAAATTCGAGCTGGTGTATACGTTGGTAATGTTTCAACGAAGATCCGCGAGATGATATGGCAACAGGTCTCCGTTCTGGCAGAAGAAGGGAACGTTGTCATGGCGTGGGCAACGAATACGGAGTCGGGCTTTGAATTTCAGACGTGGGGTGAAAACCGACGTATTCCGGTGGATCTCGATGGATTACGATTAGTGTCGTTTCTGCCTGTTTTAAATCAATGAGTTAGCGATCTTTAAAAATACGGAAAAGTTGGTGGATTTCTTGTATGCCAAAAAAGGCTTAAAATTCAGTTGGGTAGTTTTAGA # Right flank : ATTTTAGCGTTACGTATTGAGCCGATGATGTCGTATTCCCTACTGGCATAGAGACGAAAATGATAGCCCAACGTCTTCATCTAAAAAGGTGCTAAGAGTTTTTACCCGCTTTTGCCAGTTCTTTTACCAGCGGCAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCGGCCCGGTAACGCTTTATCGATATGCTGTTGGTTATCCAGTCGTACGTCGTGCCAGCTGTTGCCTGCCGGGAAAGAGGCGCTTTTGGCGCGCTGCTGATAGCCATCTTTCTTGCCCAGGTTCCAGTTGGTCGCTTCAACTGAAAGAACGGCAATCCCCGCGTTGTCGAAGACCTCTGCATCGTTACAACATCCAGTGCCTTTCGGATAGTCTTTGTTCAGACCTGGATTGGTGCTGGCAACGATACCGCGGCTGTGCGCGATAGCCAGTGCCCGGTCGCGCGTCAGTTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAA # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //