Array 1 2194632-2187514 **** Predicted by CRISPRDetect 2.4 *** >NC_021917.1 Cycloclasticus zancles 78-ME, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 2194631 29 100.0 33 ............................. TATTGCTGGGTGTGGGATAAGAAGAAAGCGGGG 2194569 29 100.0 32 ............................. CGATTTAATGCTTTCAGATTCGGCCAGCAATG 2194508 29 100.0 32 ............................. TTTTATTTCTTCGCTTATTGCGCTGTTATGCC 2194447 29 100.0 32 ............................. GGATAGTGAATGGGTCCCTAACGACTGGACAA 2194386 29 96.6 33 ............................A GTAGACTTTGTAGTATTGTCTTATTTATCATTT 2194324 29 100.0 32 ............................. GCTAATTGGGCCGGTAGAGTGTATGTCGAGAT 2194263 29 100.0 32 ............................. CCGTCATAGTTAGCACTTGCGTCACGTTCACC 2194202 29 100.0 32 ............................. GTTAATATTATGGAAATGCTAAAAATAACACA 2194141 29 100.0 32 ............................. GCCTATTGCCAGTTTCAATATCATCAATATGA 2194080 29 100.0 32 ............................. GTGACGCTTTCGGCATGACGGTCTTAATGAAA 2194019 29 100.0 32 ............................. CAAGCAGCATTACCACCTCCAACGCATGATGT 2193958 29 100.0 32 ............................. ACAATTCACCAACCATCACGACAGGACATCAG 2193897 29 100.0 32 ............................. ACCATTTATGCGTGATGCTTTTTAAATGCCAG 2193836 29 100.0 32 ............................. ATATTCAACGAGGCTGCTAGCAGAATCCCAAT 2193775 29 100.0 32 ............................. AGCTGTGTCATTGTTGTTTTTCTCGCTTACGT 2193714 29 100.0 32 ............................. TCTTGCTTTTAGTAGCTGATCGTTTAATGATT 2193653 29 100.0 32 ............................. TATTAAAAGCAACCGCTACATTAGGTCTAACG 2193592 29 100.0 32 ............................. GCCTTGCTGATGCAAAAAAACAGCAGGTTGAT 2193531 29 100.0 32 ............................. GTTAATTCATCACTACTATCGTAACTCCAAAA 2193470 29 100.0 32 ............................. CGCACCAGCATAGTAACCGTTACGCGCACAGG 2193409 29 100.0 32 ............................. GTTTTACCGGAGCTGATGTTTACGGGGCATGG 2193348 29 100.0 32 ............................. GAATCAGCATAGAGCCACAACCGCGTGGCAAA 2193287 29 100.0 32 ............................. TGGAGCGTCCGCTATCGTCCAGCTAGTATCTG 2193226 29 100.0 32 ............................. TGGGCTAGTAATACTTAGCTGCTTAATACATA 2193165 29 100.0 32 ............................. TCAGCTATCGGTATTGCTATTGGTCTTGATAT 2193104 29 100.0 32 ............................. GAAACTGGCGGACTAAAACGAATATGTGTATG 2193043 29 100.0 32 ............................. TCAACAGAGGTTGTTGTGGATAGTTGCGAGCT 2192982 29 100.0 32 ............................. ATAATAATGATTCATAGATAGTAGGGTACAAG 2192921 29 100.0 32 ............................. ACGGGTGTATTTAATCACAGCGCCAAGAGTGA 2192860 29 100.0 32 ............................. TTAGCAATTTGCTAATTGAGCGGCGCGACACA 2192799 29 100.0 32 ............................. CCTTTGGATTGGGGCGAAACAAAACACAGGTA 2192738 29 100.0 32 ............................. GCTCGGTCATTGTCAACCCCACGTTTCAAGTG 2192677 29 100.0 32 ............................. CCTACACTCAACACTGGACGGCTACGCTAATA 2192616 29 100.0 32 ............................. CGGAATGCCCGATGCGGCGATTTGCACTGCGT 2192555 29 100.0 33 ............................. CCGCTGCAATGTATCACCACGATAGTTAACATC 2192493 29 100.0 32 ............................. AATCAGAACTGGTTGCAGCCCGTATTGCAGCC 2192432 29 100.0 32 ............................. GCTTTAGGGACTCAATGGTACGCATGTTAGCC 2192371 29 100.0 32 ............................. CCCGCTAATTCAGCGGGTTTTTTAATGGAGCG 2192310 29 100.0 32 ............................. TCCAATGGATGAATATAAACCTGTCTCATCTA 2192249 29 100.0 32 ............................. GCAATGTAACCATTGATGAAGCGGCCTTTCAT 2192188 29 100.0 32 ............................. CGTCTGTTGTGTCGTTTGGCGATGGTAAAGCG 2192127 29 100.0 32 ............................. CCCTACCGAAGCAGGGCTTTTTAGTGACGTCT 2192066 29 100.0 32 ............................. TAGGAACGGTCGACAGCAACAGACCATCCGCA 2192005 29 100.0 32 ............................. AGCCGAGACGTCGTTTAACTGTTATCAACCAA 2191944 29 100.0 32 ............................. CATTATTACTATCGTTAACCACTGCATTAACA 2191883 29 100.0 32 ............................. ACAACCTAGAGATGATGCTGTACGGCACTCAA 2191822 29 100.0 32 ............................. CTCACTGAAGGCTATGACGTTTGATGGTAGTA 2191761 29 100.0 32 ............................. CGCAGACTTAATAGCACAGCGTATGCAGTAGG 2191700 29 100.0 32 ............................. GGCGTTAATAATGACTTGGTTAACTCGGCCCC 2191639 29 100.0 32 ............................. GCATGTCCAAAATGTGGCGAGCCAGCACCAAA 2191578 29 100.0 32 ............................. CATGGGCGCATCGGCAATAAATGTGCCAGTAC 2191517 29 100.0 33 ............................. GCCGTTCCACGTTTCAACTTGTTTCAGCGCGGC 2191455 29 100.0 32 ............................. ATGCGCTAGATAGCGCCGCCGATGGCTACTTA 2191394 29 100.0 32 ............................. GTTAGCTCGTATTGTTTGGCGCTATTGGTTAG 2191333 29 100.0 32 ............................. CGTAAGCAAGCGAGAGAAGTACGTCGAGCAAT 2191272 29 100.0 32 ............................. GCTAATGCTTGGCTAGTGTGCTCGTCGTGATT 2191211 29 100.0 32 ............................. GTCACCATCGCCCAGGGCATTAATAAACGCAT 2191150 29 100.0 33 ............................. AAAACCGCCAACGACCCAATCCTCATCGAACAC 2191088 29 100.0 32 ............................. GCAGCGTGTCATAAATACATTAGAGAGCGAGA 2191027 29 100.0 32 ............................. TTTCTAGCGGAGTTGATGTGCGTGATGACACG 2190966 29 100.0 32 ............................. AACGAGGCGAGCGGTAATGCAATTGATTTAGG 2190905 29 100.0 33 ............................. CGCTAATCAGCAAACTAGCAGTAATGACAGGGC 2190843 29 100.0 32 ............................. TCTGCGCAGTTAGGGGCGCTTTCCGGTGTGGG 2190782 29 100.0 32 ............................. ATGATGAATTTAGACGTGTTTGCATAGAGCAA 2190721 29 100.0 32 ............................. GGCGCTGAGTCATTAGAAGAGCTAGCTGTGAT 2190660 29 100.0 32 ............................. GCTGGAACTTTCACAGGCAACCGGGAGGAGTT 2190599 29 100.0 32 ............................. CAGCCAACGGCAAACCATGGGCCTATTGAATA 2190538 29 100.0 33 ............................. TTAATTTCTTGTATGTTGTCAACTGGTGTAGGG 2190476 29 100.0 32 ............................. TCGCCTAGATTAAGTATGATTGCAGTATGTGA 2190415 29 100.0 32 ............................. CGTGTTATTCCTGTGCGCTGGCATGTAACGCC 2190354 29 100.0 32 ............................. ACTCGACCAGTATCAGGGTCCCCGTCGTTAGT 2190293 29 100.0 32 ............................. ATATGCTTAGAACTCAAGGCGCGAGCTTCGGT 2190232 29 100.0 32 ............................. TAAGCATCGGCGCTGCGTTGAATTTCGTTACA 2190171 29 100.0 32 ............................. TTATTGATAATCTAAACCCAGCGTTGCATTTA 2190110 29 100.0 32 ............................. CCTTCTTTTTCGCCATCGGGTATGGTTTTATT 2190049 29 100.0 33 ............................. GGACTGTCTGAATTACCGTAAGTCACCCCTCCA 2189987 29 100.0 32 ............................. AGCAGAAACAGATAAAAGACTGGTCACTGGGT 2189926 29 100.0 32 ............................. CCGATTGATGTTTAACGCAGACCCAATCCTCA 2189865 29 100.0 32 ............................. GCTTCGGATAATTTAAACCCTGTTAATGCAGT 2189804 29 100.0 32 ............................. CGTGTCCTGTGTTGGCGAGTTATCTCTAAATG 2189743 29 100.0 32 ............................. CGCGTATTCAATTGGCACGCTGGCTAGAGTAA 2189682 29 100.0 32 ............................. ATTCGTGTAATCAATGCAGGGCCAGATGCTTC 2189621 29 100.0 32 ............................. GCTGGTTTGGTGGTGAAATCGGTATTCCTGAT 2189560 29 100.0 32 ............................. GCCATTAAATGCGCTTAGGTCATCATTAATAA 2189499 29 100.0 32 ............................. CGAGTTAGCTAACTATCCTTACACTCACGCTA 2189438 29 100.0 32 ............................. GATTCCTCGCCGCTAGATGCTACGTTAACCGA 2189377 29 100.0 33 ............................. GGAAACATCAGCTGATGTTTTACAAAAGTTAGC 2189315 29 100.0 32 ............................. GTGAGCTGGTTAGCACACTGGATGACTATAAT 2189254 29 100.0 32 ............................. CGGTATTAAAGCGCATGACAATCTCTAATGTA 2189193 29 100.0 32 ............................. CGGGGCCCCCACTATGGGATTGTCGTCAGGGC 2189132 29 96.6 34 ............................A GCAGGGTCTATTACATTGATAATTCGTGTGCCGT 2189069 29 100.0 33 ............................. GCCATCAAACACGGTATTAGCACAGGTTGGGCA 2189007 29 100.0 32 ............................. GATCATCAAATGACTACGGAGATCGTGAAATA 2188946 29 100.0 32 ............................. TCTAATCTGTGCGTTGGTGGCTCTAACCCTCC 2188885 29 100.0 32 ............................. CAATGGCAACAAGCAAGGCGGGTGGTCGATCA 2188824 29 100.0 32 ............................. CAGGTGGCACGACTACAGACGGTGGCGTAACA 2188763 29 100.0 32 ............................. TTGGCGATACTGTTCCCTTTCTTGGTGATGTT 2188702 29 100.0 32 ............................. CGTTATATGGCCTTTCGCAATCTTCTAAGTAA 2188641 29 100.0 32 ............................. CACGCCTTTGATTACTTCTACACAATTAAACA 2188580 29 100.0 32 ............................. AAACTGTGAAGAACGCGACAATCGCAAAATAA 2188519 29 100.0 33 ............................. AATATCAAAACGAATAGAGCGCGACGAACCCGT 2188457 29 100.0 32 ............................. ACAGTATTTGCATTTTCTTTTGTTAGCCAATT 2188396 29 100.0 32 ............................. CATCGTGAATTAGCCGAGAAGCTGGATAAATA 2188335 29 100.0 32 ............................. CTTTCGAGGCTGAGGGTGCAGGGCTGGTCAAT 2188274 29 100.0 32 ............................. CATCTGTTCTCTGCTTTGCTTGATCTACTATG 2188213 29 100.0 32 ............................. TCTTTAATGTCTGGTATATCTTCTTTCTTAGC 2188152 29 100.0 32 ............................. CTACCGATTTTTACGTACGTGCAAGTGAATTA 2188091 29 100.0 32 ............................. TACGCGAAACGCTTAATAGGGGGTGTGAAGCA 2188030 29 100.0 32 ............................. GTCTATTGCCAGTTTCAATATCATCAATATGA 2187969 29 100.0 32 ............................. CATCTTGAAATGAATTAAGAACGCTTGTTAAT 2187908 29 100.0 32 ............................. ATTCGTTTGCCGAGTTTTTGTTTGACCCGTTT 2187847 29 100.0 32 ............................. ATTTAGAGCTTATTTTGAGAGGGCCGGGCTTG 2187786 29 100.0 32 ............................. GGCTGTATTTAAACGGTTCAATAACTGATGGT 2187725 29 100.0 32 ............................. AATTTTGCTAGTTCTTTATCTTTTTTGAATCC 2187664 29 100.0 32 ............................. AAACCTGTTATTTCTAATGCTTGCTCTATATC 2187603 29 100.0 32 ............................. CGCGTTATTCTCGCGTAGTGGCTAACGTTGGC 2187542 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================== ================== 117 29 99.9 32 GTGTTCCCCACAAGCGTGGGGATGAACCG # Left flank : AAGTTCTTTCAGCAGGTGAAATATCCCCGCCCAAACCACCTAAAGAATCTGTGCCGCCAGCAATTCCATTAGCTGAAAGTATTGCTGATGCGGGGCATCGAAGTGATTAAATTATGGCCATGACGGTTGTAGTGACAGAAGCAATACCACCTAGATTGAGAGGCCGACTTGCGATTTGGCTGTTACAAATTCGAGCGGGTGTTTATGTCGGTGACTTATCGCAGCGAGTGAGAGAAATGATCTGGCAGCAATGTCAGCAGCAACAAGAAGACGGGAATATTGTCATGGCATGGGCAACCAATACAGAGTCAGGTTTTGACTTTCAAACATTAGGTGAAAATAGACGAATTCCTGTCGATTTGGATGGTTTAAGAATGGTTTCGTTCATACCGATAGATGATGAAAGTGATCTTTAACAAAATAGTATAAATTTACCCTTATTGCTTGGTAGCAAGTAACAGTTTGAAAATTACTTGGTAAATCAATTATGTATAATAAGA # Right flank : CCCAGTGAGAGGAACAGATAATGTATTTACCTGTAATGAAGTAAGGGTGTAGTATGTCTACGTCGTTGTTTTTCTATAATGGATCGGTTTGTTTGGTTAAGTACGACTAGTGCATCGTCACCATTTTGGTATCTTCGGAAAGCCCTACCTCGGATTGAACTAAACAACCTTAATAGCCATGTCTTCTAATGTATTGGCTACGACATGTATTCTCTTAGCAATCTCTTTAAGTTGCAAAATAACATCCTTACCGCGAATGATTGTAACCAAATCATTGTGTTGTAGTAATTCGGCGCTTGCTTTTGCACACGTAGAGATTACCTGGTCATATAGCTCAACTATTTGATCAATATTACTGTTAATTAAAGTTAGATTTTGTGCCGGCAGTTGGCCGATGCCATTTTCCAGTAGGTTAGACATGTCTAATAATTTTTCGGCAATAGTTTGGTAGTCTTCAAGTGATTGAAGTTTGTATTCAACTATTTCTAGATGAAAGTGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACAAGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCACAAGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //