Array 1 72566-76193 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLMH01000012.1 Anoxybacillus vitaminiphilus strain CGMCC 1.8979 Ga0171590_112, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 72566 30 100.0 35 .............................. TACGCGGCTTCCCGGGCTGTACCTTTTGGAAAATA 72631 30 100.0 37 .............................. TGTGAACGGACATCATCGTGTGTCCAACCTTCCACTA 72698 30 100.0 36 .............................. CTAACACGACGGCAATTGAACCATTTTCCACTTCGC 72764 30 100.0 35 .............................. TGCCAGCGCAATGGTCTTTGTGTTCGTGTGTAATC 72829 30 100.0 39 .............................. AACAATGGACAAAATCATCGGGAATACCATTTGCGCTAC 72898 30 100.0 38 .............................. CTATTCCGTTCGAAACAAGCTCACAGAACTAAATGCAG 72966 30 100.0 34 .............................. TTCAACAAGGAAACGATTGAACGCAGAAATGCGG 73030 30 100.0 36 .............................. TTGCGGTTGCTCTACGCTAACAAGCGTAAGAGCACA 73096 30 100.0 39 .............................. CGGTGACATCGTATCCAGTTGGTGGGGCGCTTGGGATGA 73165 30 100.0 37 .............................. AAATATATGAACAACGGAAATTCCGCCAGGAAAAGAA 73232 30 100.0 35 .............................. ATTTTCAATGTCACGTAGCACAAGGTCGTGACGTT 73297 30 100.0 36 .............................. AGAATCTTCTTCCTTGGTAATCCTGCCTTGGTGAGA 73363 30 100.0 36 .............................. TTCTGACGACTATATAGATTCTTCAAGAATTGCAAA 73429 30 100.0 35 .............................. GGTAATAGTTTAGCTAATTTTTCAGCCGCTTCTTT 73494 30 100.0 36 .............................. ACTCGCGGTACAGACGGATGACACCCTGCGCACCCA 73560 30 100.0 38 .............................. ATAGGTGAGAATATGAAACGTATTTCTATCATTTTTTT 73628 30 100.0 37 .............................. CTTAACAAATTTGATGTGTGTATCTAAATAAAATCAG 73695 30 100.0 35 .............................. TCAGTTTTTCGCCAATACGGTACAATGGACGCCGC 73760 30 100.0 38 .............................. GAGTAATACCCGGCTAATATTTGCGTAAATCTTTAAAG 73828 30 100.0 36 .............................. TTTAGTTTGACATATGGCGAATTAATGATAAAAGCG 73894 30 100.0 36 .............................. TCTCGATACATCTATAGAATTAAATGAACTTGGAAA 73960 30 100.0 39 .............................. TAAACATTCCAGAAGAAGAGATAAACGATTTTTACGAAA 74029 30 100.0 36 .............................. AAGGAGGCTGAATAATGGTGATTCTCCACCAAAAAG 74095 30 100.0 35 .............................. TCTCGTGTTCTGTAAAGTCTGCTAATTGCATTAGC 74160 30 100.0 37 .............................. ATGAGAAAAAAGCGGAGTATGAGCTGATGAGATGGGA 74227 30 100.0 38 .............................. CTCTTCGGATAATGTCTCCTGCTGACCCTTGGATTGGC 74295 30 100.0 36 .............................. CCATTCGATACAAACATTCACTTCTATTTATTTTTT 74361 30 100.0 37 .............................. CTCGTTCCAAAGAGTTCGATCAATTGTTTTACGGTTT 74428 30 100.0 36 .............................. GCAAAGGCTTGTGCTGTATCAATTTGGTCTGTCGAA 74494 30 100.0 39 .............................. TTGCGGACTTCCGTTTCAATTTTCTTTTTCATTTCTTCC 74563 30 100.0 35 .............................. GTTCTTCTAACAATATGTTTTCTATATTGTTATAT 74628 30 100.0 36 .............................. TCGCTTTAATCCGCTTCATAATAAACGCTTCACGAA 74694 30 100.0 36 .............................. AGTAAGATTTTCCTTGTGGAACGCCCTGATATTCAT 74760 30 100.0 37 .............................. TGTGTTTGTGCCCATTCTTCAATAGATAGTACAGGAA 74827 30 100.0 37 .............................. GAATTGCCAGTTTCATTCTTTTTCCTCCTCCTTTTCA 74894 30 100.0 35 .............................. AATCTTCGAGACGATCTTCTAACCATTTCAAAGCA 74959 30 100.0 35 .............................. TCGTTTCTTGCTCTACTTCTTTTGCTTGTGTCTGC 75024 30 100.0 35 .............................. GAACAATTAGAAAATGAACAAGGATGGTTATCGCC 75089 30 100.0 35 .............................. TAAAATTCTTCTCTTCCCTCTGGTGTAATGTCCTC 75154 30 100.0 34 .............................. GGCATGAATTCGAACTGATAGCCACCATCTTTAA 75218 30 100.0 38 .............................. CGCCAACTCGATGCTCTTCAAAGAATGGAAGTGAAAAA 75286 30 100.0 39 .............................. AAAATATCGCGGATCCGAACACCGATCCGAAGAAGCCAA 75355 30 100.0 36 .............................. ATGAAACCAAAGGGAGCAGTTCTTTCTGCTCCCGAG 75421 30 100.0 35 .............................. TCGCAAGGGCTTTTTATCCCCTGCTTCCGGAGGTT 75486 30 100.0 39 .............................. AGGAAAAGGGATACGAGGTATATGCGGAAGTAGAATTGC 75555 30 100.0 38 .............................. CTATATCCGACCAAGACATTTACACAGGAGGCTCATAC 75623 30 100.0 35 .............................. TCAAATAGATAATCTAAATATTCAAATAAAAATAA 75688 30 100.0 38 .............................. GTTCTTCACAAAAAAACAACAAAAAAACAACAAGGAGA 75756 30 100.0 39 .............................. TTTGACCAACTTCTTGTTCAAACTGAATTCGATTGACTG 75825 30 100.0 39 .............................. TGTGATTTCCTGCTGTATCGTGTAGATGATGGCCGCTCG 75894 30 100.0 35 .............................. TTTCTTGAGCTGTTATAAATGTACGGTGTTTTTCC 75959 30 100.0 38 .............................. GTATAATAAGAATATGGTGAGTGTCAAGGGTATTTGTA 76027 30 100.0 36 .............................. TGTTTTAGTTAGATTTTTAGTGTTTTATCCTGTTCA 76093 30 100.0 37 .............................. AAGCTTGCGCAGAAGAAATAAGAAAAAACAGAAAAGC 76160 30 86.7 0 ...................T..G..A...A | T,TT,C [76176,76182,76187] ========== ====== ====== ====== ============================== ======================================= ================== 55 30 99.8 37 GTTTTTATCTTAACTATGAGGAATTGAAAC # Left flank : AGGGAGGAAAACGGGATGTTCGCAATGGTGATGGGGCTTATTATTACAGCAACAATTGGTCTAATTATTGGCACAGAAGTCAGCGTGGCAGCAGAAAAATAAAGAAAAAGGGGCAGTCACTAAAACGATTGCTCCTTTTTCTTTATTCTCCGTTTTTCTTTTTCGCTTCGATAAAGCTCATTGAACAGAGACATAGCTTCTGAAAACATTTCCCACTGCAAATCAACCGGCTAATCATTACTTTTTTCATGTTTATCGAGAATGCTGGTTTTGTTTTTTCTAAAGATTCTATCTCAATGATATACAAGTTTTTGTCGTCGACCCCCAATCGTGCAGAAATCCCGGGGGATCGACGACAATTTGCTTTTGAAAGAAAAGGGGAGAAAAGAGAAAGAAATAAATGAAAAAGAAAGCATTGATAAAATATTCCATCTGCATTAAAATGGAAACAACATGATTTTCATTTTTATTAAAACGCTATTATATCAGCTTTTTTGGGG # Right flank : AGTGGACACAGAGAACAGAGAGATTATAATAAACTTAATTACAATCGGTTCGAGGTGTCCAATCATGAAAAAGAGAACATTTGATCAAGAATACAAGATTCAAGCCGTTGAGTTATGCTTGGAGGGGGACAAGTCCATCGCCCGAGTGGCAAAAGAATTAGGTTTGGCATACAACACTCTTCACCGTTGGGTCAAAGAATACAAAGAAAGCAATGGCACAAGCTTTGTAGGTTCAGGAAACATCAAGCCACAAAATCAAGAAATCATCGAGCTACGCCGTCGCAATCAAGAGCTGGAAGAGGAATTAGCGATCTTAAAAAAGGCGTTAGGCATCTTCACCAGAAACCAGAAGTAATTTACGCGTTCATTTTTCAACATCGAAATGAATTTCGCGTGGTGAAGATGTGCCAAGTTCTCGGTGTTTCTAAAAGTGGGTATTATGCATGGCTGAAACGCCCAAAAAGCAACCAAAAAGAGAAAAAAGAACAACTGACCCAACA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTAACTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 96299-98726 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLMH01000012.1 Anoxybacillus vitaminiphilus strain CGMCC 1.8979 Ga0171590_112, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 96299 30 100.0 37 .............................. CCTCTAGTTACTCGAATTCCGGAAATCGCCTAAGTGA 96366 30 100.0 35 .............................. TATACAACATTCGACAAATTTTTTGGTTGTTTTGT 96431 30 100.0 35 .............................. TTAAAACTTCTAAATATGTTTCAGTCATGAAATCA 96496 30 100.0 36 .............................. TGTGGAAGACTCTTGGGGAATTGCGGTGTGGCATTT 96562 30 100.0 38 .............................. TTTCACCTGTTTAACGTCGCGACCGAATCGAGCGAGAA 96630 30 100.0 36 .............................. TCCTCGTCAAGAGGCTCAAGCTGTTGTCCCAGCTGC 96696 30 100.0 35 .............................. ATGAAACGGTAAAGGTCTTCATCTTCCCAAAGTGT 96761 30 100.0 39 .............................. CTCTTACGAGCGCCGGTATTACATCAGCACTTGGATTCA 96830 30 100.0 36 .............................. TTTTGTTCCGATTGGGCAAATGATGTCTATTACTGC 96896 30 100.0 39 .............................. TTCGGCGATTTTTCGAATTGCACCGAGATTTTCAGTGAG 96965 30 100.0 38 .............................. TTTTCACAAATTCCAGAGGACAGTCGGTGGAGCTGAAA 97033 30 100.0 38 .............................. ACACTCAAAAAATTTCTAGAAAAAACAAAACAATAATC 97101 30 100.0 35 .............................. TCGTGATTTGTTGAAGTGATTTTTTCACCTTCAAC 97166 30 100.0 38 .............................. ATAGATATTTATAAAAAAGGAATAGCCGAGAAATTTTT 97234 30 100.0 36 .............................. ATCGGAAAATTCGCAATGACATGCTTGCCCTTCGAG 97300 30 100.0 36 .............................. TTGTGCATTTCATCAACAATTTTCTTTTTCATTTCT 97366 30 100.0 34 .............................. CTGCTTGATATTGTTTTAATTGTTCGGAAACCGT 97430 30 100.0 37 .............................. AATCCCGAAGTAAAGTTACCGATATTCACTTTATTAA 97497 30 100.0 35 .............................. TGAGCAGAACTTTGCTCGCCAAATCCTACAATTTC 97562 30 100.0 38 .............................. AGAATCGCTATTTTTTTCATTCTTTTTCCTCCTCCTTT 97630 30 100.0 40 .............................. TGGGAGTTGTTGGAGTCGTTGGAACCTTGACTGCAGCTGT 97700 30 100.0 37 .............................. TATCTTTACTCAACGCTTCATCCTCAAAGATTGAAGA 97767 30 100.0 38 .............................. TCCAGCATGACGACCACTATCCCGCTGGATTCGCGAAC 97835 30 100.0 38 .............................. GAGGACTTCGAAGGAATTCCCCACTATCCGAGGCACTT 97903 30 100.0 35 .............................. CAGCACACAAGCTAACGAATAAAGGAAAAGTATTC 97968 30 100.0 36 .............................. TGAAAGATAATAACGGGCAATTTTTATGGCAACCGG 98034 30 100.0 36 .............................. GTGATCCGAAAACGAAGTTAATACAGTATGACGCGC 98100 30 100.0 36 .............................. TGTATGGTGTTTCGTTGTGTCCCTCTTTTCGTTTGT 98166 30 100.0 35 .............................. CGGTTTTTGGTTGTTTGTTTTCTTCGTTCATTTAG 98231 30 100.0 34 .............................. AAAAATACGCCGCCAAAAAAGTTGGTATAAAAGT 98295 30 100.0 37 .............................. TAATTATAATCAGAAAGAGGAAATAAAGTTAATAAAT 98362 30 100.0 39 .............................. GTGACTTTCAATATTGGGACGAACAAGAAAAAGTGGCGA 98431 30 100.0 37 .............................. TAACGTCAATGAAAACATCCATGCAGACCCCTCCATC 98498 30 100.0 36 .............................. TTGTGGTTTTTGGTTTAAATACTCCAGTTAATTTTC 98564 30 100.0 37 .............................. AACGGATCGGCAGCAACCGCGGAGCCGGTTTTAGATA 98631 30 100.0 36 .............................. AAAACGGTTATCAATATAAACAAATTGATCGTATCA 98697 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 37 30 100.0 37 GTTTTTATCTTAACTATGAGGAATTGAAAC # Left flank : AGGTTAATTTTGATGACGGCTGGTTAAACAGAAAAATGAGTAATCACTGTGAACGATTGTTTCCTTATTTTACATAGTTGTTTTTATTCCGCTTTTCTTTTTCGTTTCGATAAAATTCGGAAGCATTTTTATCAGTGCTCGCTTTTCAATCAGTTAGACGTAGCTTCTTTGAAATGCCAAGTTCTTTGGCGGTTTCCCGATGCAAATCAAGGTCAAACCGTCTGATAATCACTTTTTTTCATGCTCATCGAGAATGCTGATTTTGTTTACCTTCTCCTTCTAAAGCTTCTATCTCAATGATATACAAGTTTTTGTCGTCGACCTCCAATCGTGCAGAAATCCCGGGGGATCGACGACAATTTGCTTTTGAAAGAAAAAGGGAGAAAAGAGAAGGAAATAAATGAAAAAGAAAGCATTGATAAAATATTCCATTTGCATTAAAATGAAAATAACATGATTTCCATTTTTATTAAAACGCTACTATATCAGCGATTTCTTGG # Right flank : AAAAATTAAACGATCGCATTAGCCAATTGTAAACTAGCACATTATTTCAGAATCCCTTTTTCAAATTATTTCAGGCGGATTCGGAAATAATGTGCAAAATTTTTGCGGATTGTTCCGGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTAACTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 57174-59675 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLMH01000002.1 Anoxybacillus vitaminiphilus strain CGMCC 1.8979 Ga0171590_102, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================== ================== 57174 30 100.0 36 .............................. AACAGGTGAAACAATTTTGGCTAGTTCGTTCAGAAG 57240 30 100.0 36 .............................. TTTCTTCATGCTCAGCATGTCTACCACAATGACATT 57306 30 100.0 36 .............................. ATGATCAGCAAATTGACGGATGTATTCAACAAGGCA 57372 30 100.0 36 .............................. TCATATACTTCCAATCTCCCGACGAGTCCCGCATCG 57438 30 100.0 36 .............................. ATCATCGTCTGGACGCTGCTTGAAGAGATGCACAAA 57504 30 100.0 37 .............................. ACGCGAAGCAAAAAAACTTCTCCTTCCCTTAGCCCCC 57571 30 100.0 35 .............................. ACCTTCATTTCAGCTGCATCCAGCTTTGCTTGCAA 57636 30 100.0 35 .............................. TGAAAATGGACAAGCATTCTCAAGTCAAAAATTGC 57701 30 100.0 36 .............................. AAAAGTTGCGATGGAGCTAATAGGTTCGCCTATTGG 57767 30 100.0 37 .............................. TTATTTCGATTCCGAACGCTTCAGCGGTTCCGTTTGG 57834 30 100.0 35 .............................. AGAATCTTCTTCCTTGGTAATCCTGCCTTGGTGAG 57899 30 100.0 38 .............................. TCGGGCGCCGCGTCAGACGAATCTTGCCGAATGTCAAA 57967 30 100.0 38 .............................. ATATTTGATGTGTCGCCAATCAATCCTGTTGTGAGTAC 58035 30 100.0 37 .............................. ATAATTTTCCTGCGACGGATGTTGTGACAGGGGATTC 58102 30 100.0 35 .............................. TCTCAAATACCAGAAGAAATTAGCAAAAGAACAAC 58167 30 100.0 38 .............................. AAAAAATATGATTGTAAAGAGCCTTCAGACATTTTTAG 58235 30 100.0 39 .............................. AACTCGCCTAGACGAGTTTTTATTTTCTTGTCTCTTCTG 58304 30 100.0 39 .............................. TTTGAGCGGTATATCTACCGCTGAAGAATAAGCAGGAGC 58373 30 100.0 37 .............................. ATGTGTCGCCCTTTTGGATCGTGTAATAGACCGGTCC 58440 30 100.0 34 .............................. AGCGAAAAAACTATCGGCAAATATCCAACAAAAC 58504 30 100.0 36 .............................. CGCTTGACTCAAGAAACAGTTCTTCGAAGCAAAACC 58570 30 100.0 37 .............................. TGGAGTTTTGGCAGAACGAAAAAAATGTCAATACATT 58637 30 100.0 38 .............................. TCTCGATTGCGGTCAATGCGGATCCGAAAGAGATACGG 58705 30 100.0 38 .............................. CCGGATTCATGGACGGAGAGCCGATTCAAGTAGAGAAG 58773 30 100.0 35 .............................. ATGCTAAAAGATGACCGCTTTGTTAAAACAGGAAG 58838 30 100.0 39 .............................. AATTGTGAGAACGCCACGAATTTCCACTTTTTCAACTGC 58907 30 100.0 35 .............................. CGAAAACTCAATCCGGGTGTTGATGAACGGAAACT 58972 30 100.0 39 .............................. TCGTGCAACCAAGTGGTTTGACTATGGATTCATTTGAAA 59041 30 100.0 36 .............................. GCGAGAAATCCCCCCCAGTTCCGTTAAGATTCTGAG 59107 30 100.0 38 .............................. CTCGCGACAAATCCAAAAATCCCATACACCGATGCTGG 59175 30 100.0 36 .............................. TTTGAGGATTCGGCTTCACATACGGAGTTGTCGCCA 59241 30 100.0 36 .............................. ACACAAGAGGGATTAGCAAAAGCTCTAAATATAAAG 59307 30 100.0 36 .............................. ATTGAGCCAGCGTAATGACCGGGCAACTAAATTCTT 59373 30 100.0 34 .............................. ATGCAACGCTTTATTCTGATAATCTCAACTTAAA 59437 30 100.0 36 .............................. CTTCCAACAGCAACCTTGGAATATTCAATCCTTTCA 59503 30 100.0 37 .............................. CACTAGCAATGGCAGCCATATCGTCAACCGTAGCGTC 59570 30 96.7 46 .............................T ATTTCTTTTTGCAATTTTTCTATCTCTTCATTAATTATATTATAAT 59646 30 83.3 0 ..........C..TC..A.....C...... | ========== ====== ====== ====== ============================== ============================================== ================== 38 30 99.5 37 GTTTTTATCTTAACTATGAGGAATTGAAAC # Left flank : TCTCATTTTTTACAACACGCTTTTTGATGAAAACGCCGCATGCCATCTCGCTCTCGGAAAAGCGTATCCGACGAACTTAAAAAACGGGGCGGCGATGTCAAAAGAAGAACTGGAAAAATGCGGAGCAAATGACAGTTTAATTCACGAAGATTTCATGATTGGCTCCGCCGAACTGAATATTGACGGCGTCACAAAAGACGGCAAGCGAGAACCAATCTTCCGCAACGGAAACTGGGCGTTTGAGCTGGAATAAAGCAGGCAGCAAACTTTGAACATAACCATACTTCAAACAGGATTGGCTATCATTTAAATGTCGTCGACCCCCAATCGTGCAAAAATCCTAGGGGATCGACGACACTTTATTTTTTAAAGCAACGATACAGAAAATACGGAAAATACAAGAAAAACAACGAATTGATAAAATTCACTGTTTGCGCTAAAATAAAAACAACAAAATTTCGACTATTATCAAAACCATGTATTATCAACGATTTTTTTGG # Right flank : CAACCAGCTTAAAGTTGCTGCATGAAGGGATACATAATAAGGATTCTGTTTGAAGACATCATTAGCGGAGAATTGCCGCCCCAATAACAAAAAGCCCCTCTCGTATGAGAAGGGCTTTATTTGTTTAATCGGTGGTGCTAGATAAAATCTGGAGCATATAAAAATAGCCCTTGCATGGGAGAAGACCCATGCAAGAGCACTTTCATTTTACAACAGATCAAACGAAAATTCAAAAACAATATGCGGCCATTCTATTTTTGTATCAACCCAATTGTCTTGTATCCAAACCCGCTTACAACGCAGAAATCGGCACTTGTTAAAACAAGAAGATGCGGTGATCATCGCCATCCATGTTCTTGGCAAAACTGCTTGGTTATATCTCTGAACGAACATGGCATCGTTTCGTGATCCGGGAACCTATTCGCACTAGATGGAATTTTATTGGCATATACCTTGGTAGTTCTTGGGCTAGTTGAGCGGTAAAGATCAACTAGCACCAC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTAACTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 430484-429093 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLMH01000002.1 Anoxybacillus vitaminiphilus strain CGMCC 1.8979 Ga0171590_102, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================= ================== 430483 30 100.0 38 .............................. TTAGATGATGGGAAAATCATTCATGTTGATCCGTCTGA 430415 30 100.0 36 .............................. TCATTGTTGCGTTTTACTTTTTTAAGCACAATCATC 430349 30 100.0 39 .............................. TCAAAGACGAGAACGGCTCCGAAATCACAATCAGCAACG 430280 30 100.0 36 .............................. GCCAATTAGAAACAATGTTGCAACGTCCGGCAGCGG 430214 30 100.0 39 .............................. TTGTAACTCCCTTAGCTGTTTTTGTTCTGGTGTTTCTGG 430145 30 100.0 35 .............................. TTGATTTAACAGAAACAGAACAAATGGAACTTTTC 430080 30 100.0 35 .............................. ACAACACCAAAAATAAAGGAGTTGATTCCACATGA 430015 30 100.0 36 .............................. CAATTCCATTGGCTCGCTGATAAGGAACTCTCCATC 429949 30 100.0 35 .............................. CAAGCCAATCCATCTCACAGGCATGTTCTTGTGTT 429884 30 100.0 39 .............................. TTCTCTACGAAAAATCTCACTAGAGCAAGCACAAAAACT 429815 30 100.0 35 .............................. CCTAATTCTTTACGATCAGTGATAATTTTGTTTTC 429750 30 100.0 39 .............................. TATTTTGATGAAAAACCAAGTGAAGCCATCCGGGAACAG 429681 30 100.0 39 .............................. TCGCTGCAATTGTCAAACCATTCAACACCAGAGCCGCCA 429612 30 100.0 36 .............................. TTGGAGTTTTGAGCTTCTTGTATAGTATCATTTTCT 429546 30 100.0 36 .............................. CAGGATTGTACGCCAATGGAACGCCAGCAACATCTT 429480 30 100.0 39 .............................. CATCACCATTAAAATGGTACGCCTGATGATAGTTTGAAG 429411 30 100.0 38 .............................. ACTTCTGGCTAATTTCCCATAGTTCACCCAATTCTAAA 429343 30 100.0 37 .............................. TCTTTTTTTCGAGACTCCCGCTCCTTTTCCCGTATTT 429276 30 100.0 35 .............................. TAGGGTGAGCACTTCCTAATGTAGCCAACTGAAAC 429211 30 100.0 57 .............................. GGGTCAACGTCAATCAAGTCATAAGTGGTTTGGTCGAGTTTTTATCTTATACCATTT 429124 30 76.7 0 .C....G..........T.T...G..G..G | GA [429098] ========== ====== ====== ====== ============================== ========================================================= ================== 21 30 98.9 38 GTTTTTATCTTAACTATGAGGAATTGAAAC # Left flank : TGTCGGGAGGAACGGAGCCTGGTTCGTCCCCTCGGTCAATCCCAACTGCTCTTTCACGACTTGCCATATGGCGGACAACGTATACTGAAAATACGGGAGGAGAAAGGAAGGCAGCACACTCACCGTCTTCAAGCATTCCCGACAGCGATACCGGACAATCCAAATGCGATAATCACCATGTGGGGTCAATGCGTTTCGCTCATAGTAACCGTGGCGGTGCAACGGGCGCTTGGCCCGGCAATGCGGACACTGTTTCAGAAGAGGGAAGTCGTTTTCTTTTCCACGCTCTGCATACGTTTGGACGTCAATGCCAAAGTCATGAAATTGAATCACGTCCTCCTCCCCTCCTCTGAACCGATGGATTTTCTCTTCCGAAATAATTCACAAAAAATTTAGCACATTCTTTCAGAAAAGGGGAGAGGGCTTTCTGAAGGAATGTGCAAAAAAATGGCTCTTTTGTTCCGAAATAAAGTGATAATTTACACCAATTAGAAACAATG # Right flank : TGTCTGACCGGTTTTGTTCAAAAAAAGGCTGTCTCATAAGGTCTGACCTCACGCCTAGTTTATTTATCTCAACATGATGATCGATATATTGGGTTGCGGGGTCTGCACTTGAACGTTTGAGACAGCCTCCTTTTCTTTGCAGATATATGTTTATCTCCGCTTTTCTTTTTCGTTTCGATAAAACTCATGAAACATTTTCATGAGCGCCCGCTTTTCGATTCGCGATACATAGCTTCTTGAAATGCCGAGTTCTTTGGCGATTTCCCGCTGTGTTTTTTCTCTCTGCAAATCAAGGCCAAACCGGCTGATAATCACTTCTTTTTCCCGTTCATCCAGAATGTCAATATATTTTCTAATTTTTTCTAATTCCATGTTTAACTGAATTGTATCTACGACATCTTCTGATTCGGATTTTAAGATATCGAGGAGGCTGATTTCGTTGCCTTCCTTATCCTGACCAATGGGGTCGTGAAGGGAGACATCTTTTTTTGTTTTTTTTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTAACTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 28446-32752 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLMH01000007.1 Anoxybacillus vitaminiphilus strain CGMCC 1.8979 Ga0171590_107, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 28446 30 100.0 36 .............................. GAAAAAATGGGGAAAAAAAAGGGAAAAGATAGAAAA 28512 30 100.0 35 .............................. CGTACAATACAGTGACGATATCAATGCTCATGCGA 28577 30 100.0 38 .............................. CACCAGATAGTAGATTGAACAATCAGAATGTAGAAGAA 28645 30 100.0 39 .............................. AACTTTACGAGCCTGTCAAGAGCGACGCCTGTTGCTGTA 28714 30 100.0 37 .............................. TTTCACACTTTTTTTATGATCTCACAAGCTGCAATCC 28781 30 100.0 39 .............................. TACTCTTGTCACTGGTATAATTTTAAATAGATAAAGCAA 28850 30 100.0 38 .............................. CAGACATAATGGTACATATATAATATACAATAAAATAG 28918 30 100.0 36 .............................. TGAGAATTTTAAATTTGAAATACTTGAGCATGTACA 28984 30 100.0 39 .............................. CTTCTTCCCATTCTCCTTTTTCGTTTTTGTAGTAGCTTT 29053 30 100.0 38 .............................. AATAAAAAACAAAGCTAGCATATAGCTAGCCTTTTTTA 29121 30 100.0 35 .............................. CAGTTTATGAAAGGGGGGGTTTAGGGTGACTGGTT 29186 30 100.0 38 .............................. ATATGCCAGAACAAGAACAACAACAAGAACAACAACAA 29254 30 100.0 38 .............................. TTTAGCTTTTTGTGCACGACCTCATACTCACATAAAGC 29322 30 100.0 37 .............................. ATGTGTCGCGCTGCGATCGGGAAAGTCTGTCCAATTT 29389 30 100.0 37 .............................. ATTTCCATTTGTTTCACCTCTGCTTGTCCAATTTTCT 29456 30 100.0 34 .............................. AGCCTAGAGCGTTGCCAATCGGAAACGGTTGGCA 29520 30 100.0 37 .............................. TAATTGTATCTACTTTCGTTGGCGCAATGGTAGGCTT 29587 30 100.0 39 .............................. TCCGAACTTTCAATCATATCAAAATGATGACGGACAACC 29656 30 100.0 35 .............................. TGATGAATGGCTGGACGAAGAAACCCTTGGTAATT 29721 30 100.0 34 .............................. TATTACGAGGATATTCAAATTTCTCAAAGTCTTT 29785 30 100.0 36 .............................. TATTCAATACGATGAAATCACGGAATATTGGCACAA 29851 30 100.0 35 .............................. TCCGAACTTTCAATCATATCAAAATGATGACGGAC 29916 30 100.0 39 .............................. TACTATACTCAACAGAACAAAAACAAAAAGGAGTGTTGA 29985 30 100.0 38 .............................. CGAGAACTGCAACGGAAAACTCTTTCCAGCTATCTCAA 30053 30 100.0 38 .............................. AGTTGATTGTAGTAATAGTCAATAGTCATATATAAAGC 30121 30 100.0 39 .............................. ATGATGTTTTTTGTAGAGTCCCGACCATTTGTACTTCGA 30190 30 100.0 39 .............................. CTTTTTCAGCTATATTACTTTTTTGTAACAAAAAAGCTA 30259 30 100.0 38 .............................. AACGCTGGAATTTTCGTGATGAAATATCGGTCGAGTAT 30327 30 100.0 36 .............................. TCACAACATATTCAGAAAAAGTGGAAGAATTGAAAC 30393 30 100.0 34 .............................. TTGTCAAAGTTTCTTCTATTCTAGGTGTTAATGT 30457 30 100.0 34 .............................. TTGAAACACCTTGCTATTTTCCCTGTTGACAACG 30521 30 100.0 38 .............................. ATTTCTGAATCCACAGTAGATTTTTCACAGGCTCACAT 30589 30 100.0 35 .............................. ACCTGTTCATTCGCCGAATACCAAACCCTTTTCGC 30654 30 100.0 38 .............................. AAATAGTACTAGTTCGCAGCATAGTATTAGTTCGCAGC 30722 30 100.0 35 .............................. TAAAATGTTTTGAATTCGTTACACATATATTGTAT 30787 30 100.0 36 .............................. TAGAAAGCAAAATAAGAAGCGAGGGTGCCCCTCTAT 30853 30 100.0 35 .............................. CTTCGCACATGTTACACCCTCGCTTTCGCCACGCG 30918 30 100.0 35 .............................. AAGAAGCCTGAAGGCACAGACATCGTCAACATCGA 30983 30 100.0 39 .............................. AACATTTGCTTCCTGGTCTAATTCGTCATCTTTCAGAAC 31052 30 100.0 38 .............................. TCGGATGCCACAAGTGATTCGCGTCATTTCTGATGTTG 31120 30 100.0 39 .............................. CGTTATAACTGGAAGATTACTTGCTGAATACGATCATAA 31189 30 100.0 40 .............................. ATCAAACTATTTTGCACACCGACCACCCCAAACAAAAAGA 31259 30 100.0 36 .............................. ATACGTTCTGGTTCAATATTGACGCGACGAACTACG 31325 30 100.0 35 .............................. AAAGGAATTGGCTATATAAAAAATCTCCTGCCTTG 31390 30 100.0 36 .............................. TATGTTATTTTTGTTTCTTGTGTTTTTGGTATTGTT 31456 30 100.0 38 .............................. CATTCTGGACAAATTTCATATCCTCCATCATTATACGG 31524 30 100.0 37 .............................. GCAACAAGTTGGCCGTCAGTGAGACGCAATTCGGCAT 31591 30 100.0 39 .............................. TCAGTCTGGCTGATCAATATGAAATCGTACCCGAGCTTC 31660 30 100.0 36 .............................. TATGATACAACGAAAAAAAACAACCAAACAGACCAA 31726 30 100.0 35 .............................. CGCCCAATCGCTGCCCATTTCCGACGCTCTTTTTC 31791 30 100.0 34 .............................. ATTTTTTTTACGATTTTTTCAAAAAAAATAACGC 31855 30 100.0 39 .............................. CCACTGTAATGCTTATCGGTGTTGGTGTTACGGTTTGGT 31924 30 100.0 35 .............................. TTTCCCTTGCGGACAATATCAATTTGAGCTTTCTT 31989 30 100.0 36 .............................. AACTTAACAGCCGATCAAATTAAAGTCATTGATAGC 32055 30 100.0 38 .............................. CTTCAATGTTTACTCGGTGCTTGCCATCTGGCAGAACA 32123 30 100.0 36 .............................. TAAAATGATTTCGCAAAATCCTTAGCCATTTATATC 32189 30 100.0 36 .............................. TTCTTCTGTCGAAACGCGGATGTAGAGTGCAACTCG 32255 30 100.0 39 .............................. TTTCCGGTGCACCGAACGTCCCACACCCAGCATTCATCG 32324 30 100.0 39 .............................. AACCAAACCGTAACATGCAATTTTTGTTTCATGTACGGA 32393 30 100.0 38 .............................. GCGATAGTTTACAAACGTTTGAAGGAAAAGAAGCATGT 32461 30 100.0 35 .............................. CAACAATTTCGAAGCCATTGCACCTCAATATTTTG 32526 30 100.0 38 .............................. CCTCGATATATATCAAATCTGAAGATATAATCCACTAG 32594 30 100.0 35 .............................. ATGGATGATGGTATTTATTTCATCTAGGAAAACTT 32659 30 100.0 36 .............................. ATTTAATTTCTGCTACATATTCTGCTTGAGTTTGGT 32725 28 83.3 0 ...................--...C...CT | ========== ====== ====== ====== ============================== ======================================== ================== 65 30 99.7 37 GTTTTTATCTTAACTATGAGGAATTGAAAC # Left flank : CACAGTTTTTTCACCCATATGATGAAGTGTTTCCACATTTAATTGAAGTTAATTTTCGCAATAAGTATGAAGCTTATTACGGAGCTCCGCCACAAGAGAGATTGTTTATTGAACCTTTGCATGTTACTAAGAAACATAAAGTTGTAACGACTTTTAAAAATTACTATATCACTGCTTGGCAAGGGAGATATCGTTTACGATCTGCCCCGAAGAATCTAACTTTCCTTTTGCAAACCGGAATAGGTGGACGAAACTCACAAGGGTTTGGGATGTTCCATATTATTCGAGAACTGTAGCTTAATAGATCATTTGTCGTCGACCCCTAATCGTGCGAAAATCCCCGGGGATCGACGACATTTTATTTTTTAGAGTAACGACGCAAAAACTCCAGAAAATAAACGCTAAACAGAGAATTGATAAAATTTACTGTTTACGCTAAAATGAAAATAACAAAATTTCCATTATTATCAAAACCTTGTATTACTAACGATTTTTTGGGG # Right flank : TGATAAAAAAACTTGTCCAACAACATGGTCATAATTTATGAAGATGAAAGTCATATTCGCGACTACCAAGCTCTTCGTACCACATGGAGTGTCAAAGGGCGTCAAAAACAAATCCCTACGTATGGACACCACGCGACAGTGAGCTTATTCGGCGGTCAGTGAATTTCTCTGTATGGAAACGAATCCATGCCATGCACAGGCTTTTCTGCGATTTCTTCAATATACATTAGCTCAGTATCCAAATCAACATGTAGTGATGGTCTTGGATAATGCAAAAATTCATCATTCGAAAATTCTTCAGCCTTTTTTACAGGAGCACGAAGAACAGTTAACTTTGGTATTCTTACCCCCTTATTCGCCGAATTTAAATTTAGTGGAACGAATTTGGGGGTGGCTCAAAGAGAGCGTGATTGCCAATCGGTTCCATCCTACTCGAAAAGAGTTGAGAGAATCGATTGTTTCGTTCTTAGAGTACCTTTCTGAATTTCCAGAAAGAGTGC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTAACTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //