Array 1 469706-473214 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLGQ020000002.1 Delftia acidovorans strain D4B KP729_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 469706 28 100.0 32 ............................ AAAGACCAAGGCCGAGGGGCCGCTTTCGGTTG 469766 28 100.0 32 ............................ GATGGCGCCGGGGTGGCCTGGCTACTCGCGGT 469826 28 100.0 32 ............................ TAGTCAGGAAGCTGTCGAAAGAATCAAGGCGC 469886 28 100.0 32 ............................ GCCGAGTTGGATACATACACAGCGTTCGATCC 469946 28 100.0 32 ............................ TATTTCACGGGGCTGGAGCGCATCGCGTTCGA 470006 28 100.0 32 ............................ GTCGCCGTTGATGGTCCACCAAAGGTGTTCGA 470066 28 100.0 32 ............................ TGAAAAGCGAAACCCGCCGGGAGGGGCGGGTT 470126 28 100.0 32 ............................ AGCGTCTCGGCGCGGGCCATAGCACTCATGTC 470186 28 100.0 33 ............................ AATGCGCTGCAGTGGTTTTGGATGACGTGGCCT 470247 28 100.0 32 ............................ AGGCAGCGCGCGGAGTGCGGCCCCAGCCTACG 470307 28 100.0 32 ............................ ATCCGCATCGGTGACCGCGAGATCGAGGCGCC 470367 28 100.0 32 ............................ TGCCTAAGAAGAACCGCGACGCCCTGCGCTGG 470427 28 100.0 32 ............................ ATCCAGACCTGGCACGACCTTTGTGCGCTTGA 470487 28 100.0 32 ............................ TGCCCGACCAGGAAGACCGGAAGAACCTCAAC 470547 28 100.0 32 ............................ ATTGAGCTTCTTCACGAATTCATCACGATCTC 470607 28 100.0 32 ............................ GCTTTACCCAGGCTGGGATCGCAGGCGCCATA 470667 28 100.0 32 ............................ ACTTCAGGCGCAGCAGGTGCTGCCGTGGGCAT 470727 28 100.0 32 ............................ CATAAAAAAGGCCCGCCAAAGGCGAGCCAGAA 470787 28 100.0 32 ............................ AGTTGGTCGTTGATGGTCGCCGCGCGCCCCAC 470847 28 100.0 32 ............................ TGACACGCACCGGCATCGATTTTGTCGAGTAC 470907 28 100.0 32 ............................ GTGCCGGCGCGGGTCAGGTCGCCCATGACGCC 470967 28 100.0 32 ............................ AGCATCGAAGCCGCCCGCGCAGCACAGGAAGC 471027 28 100.0 32 ............................ TCCAGCAACCCGGCAACGTCGCCCGGGATTCG 471087 28 100.0 32 ............................ GTCAATGCCGCTGGTCATGGCTCCGGAGCGGT 471147 28 100.0 32 ............................ TGAAAAATTGACGGTACCGGAGAGCGTCAACG 471207 28 100.0 32 ............................ TGCGCCCTGCGCACGAAGGCGCCCGTGCCACG 471267 28 100.0 32 ............................ TTGACGGCGGCTTCGATGTCGTATTTGATCTT 471327 28 100.0 32 ............................ ACGGCCGACTGCTGGTAGACCGACACCAGGGC 471387 28 100.0 33 ............................ AGGAAGCTCCGGTGACGAAGGGAGATTTCCAGG 471448 28 100.0 32 ............................ AATCAGCGCGCCGCCGAAGCACAGGCCCAGGC 471508 28 100.0 32 ............................ GCTGGGCGGTGGTCGTCGTGCTCGCACTGGTT 471568 28 100.0 32 ............................ AATGTCGCCGCCCGAGGCACCGCTGCCACCAC 471628 28 100.0 32 ............................ TCGGCCATGTCTTTGAAGTGCAGGCTGACCGT 471688 28 100.0 32 ............................ TGGGTCATCCCTCTTGTGAGCTGATTCCCCGA 471748 28 100.0 32 ............................ ATCAGCTGGTGGATTTCCTGCGGGCTCACGGT 471808 28 100.0 32 ............................ TCGCCCGTGGCAGGGTCGGTCCACACGTTCCA 471868 28 100.0 32 ............................ CCAACGCAAAAAAGCCCCCTCGGCTGCCGTGA 471928 28 100.0 32 ............................ GTGCAGCAGGAGCGATTCAGTCGGTGCCCGGC 471988 28 100.0 32 ............................ TGCAGGCACAGCAGGCTGATGCCCAGCAGCAT 472048 28 100.0 32 ............................ GCCACGTCCGCCACCGCCTGCCCCGCTGCCCT 472108 28 100.0 32 ............................ TGTGGGACACCGAACTGCCCGGGTTCGGGATC 472168 28 96.4 32 ...................A........ AGTTGGGCACATCCTCGGGAATTCGGCCGGCA 472228 28 96.4 32 ...................T........ TGGGGGCGCGACTTGTTGCTGCAGGAGACGAA 472288 28 100.0 32 ............................ TGCAAGCCTGGCAAGGCCCGCCACCCTCGCGA 472348 28 100.0 32 ............................ TCCCAGAAATGCCCCCATGACATGGGCTCTGG 472408 28 100.0 32 ............................ TGGAAGCAAAAAGCCCCCTCGGCGCCGTGATG 472468 28 100.0 32 ............................ GCCGTGCTATGTGCCGCCGCCCGGGGGCGCTG 472528 28 100.0 32 ............................ AGCACATTCCCGCGAAACGATGTGTTCCAGTC 472588 28 100.0 32 ............................ AGCACCAAGAATCTCGCCATAGTCACCGGCTT 472648 28 100.0 32 ............................ ATCATCTTCTCGACCTGCTCCAGGCTTGCGCC 472708 28 100.0 32 ............................ ATGGAGTCGAGGCACTGGGGGCGGGCGTTCAT 472768 28 100.0 32 ............................ ACAGCACCAACACCCGAACTGCGCGCCCTAGC 472828 28 100.0 32 ............................ TGCAGCCAGTTGTCCACCCGGTGCTGGGCGCT 472888 28 100.0 32 ............................ ATCAATTCGCTCGCGACTCTCAGGGCCACTGG 472948 28 100.0 31 ............................ GTACAGCACCATGCCTTCCCCGGGAAGGTCA 473007 28 96.4 32 ............G............... GCCCTGGAAGCGCCTGCCGCCCCTGTGCCGGC 473067 28 96.4 32 ............G............... ATCGGCCAGCTTCACGGCTTTTATGCCCACCT 473127 28 96.4 32 ...........................T CCCTCAACCTTGACGACCGAGTAATTTTTGGA 473187 27 78.6 0 .A....-.G..T..G.........A... | A [473208] ========== ====== ====== ====== ============================ ================================= ================== 59 28 99.3 32 GTTCGCTGCCGCATAGGCAGCTCAGAAA # Left flank : CGCGCTGCGCGGCCTGATGGAACAGCCCTGGCTGCAGGGCATGCGCGATCACGTGCACTGCACGCCGCCAGCTTTGGTGCCAGAGGGCGCCGTGCCCTACCTGGTGCAGCGCCGGCAATTCAAGACCAGCCCTGACCGCTTGCGCCGCCGCCGCATGCGGCGCAAGGGAGAAACCGCTGAACAGGCCGCGGCCGCCATCCCCGACAGCGTGGAGCGCACCCCGGACCTGCCCTACGTTCAACTGCGCAGCGCCAGCACCGGCCAGCCGTTTTGCCTGTTCGTGGAGCAGAAAGCGGTGCAGGGCATGGCGGGCCAGGAAGGCTTCAACACCTACGGGCTGAGCCTGGGAACTGCTGTTCCCTGGTTCTGATCCTTTTTTCTGGCGGCCTGAAGACTGCCTTGTAAATCAACAGCTTGGCGGATGCCCCGGAATTTTGGGTGTTCGCCTGCTGGAGGTGAAAGCTCTTTCAAAATCAATGGATTAGGGAATTTTTTGCCTA # Right flank : ATGCTCGCTGCCTAGAGTGGTAGAAGCCGCCCTGTACTCGGTCGGATCTTGCCTTGCATTACCCGGTACGGCCCAGTCCATGGAGCCGCGCTGCTGTTCCCGCAGCTTCTTCCGCATCCGAGACCTTCTGAACCCTCATTTCATTCCCTGTTCCACAAATTCCACAAAACTCGCACCTTCATCGAACACCCTCAGGGCCAGCGACAGGCGCTTGCCGTAGACAGAGTCGGGCCGGCTGAAGGCTTGCACTGCCAGTGCAACAGCAGAGCGTGCCCGATACCACTCGCTGTCGAACTCGCTGGCGCAGCCGAGCTTCATGTCCTTCATTCGCCGGATGTGATGCAGGGCGAGTTCTGCGACCAGTTCTACTTCAACATCGGTTTCGTCCCGTACGTTATCCGTGTCGGTGGTAGCAATCAGGACCTCCAGGCGGTGCTCGGCACAACGGATGGCAAGCGCCATCATTTGTTGTGAATCGGGGCATTGAGAGGTGCCGCGAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //