Array 1 371-37 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAPW01000020.1 Arcanobacterium haemolyticum strain NCTC9697, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 370 29 100.0 32 ............................. TAGTCGTGGTCGTTTGTGTCCCAGAGTTTCAT 309 29 100.0 32 ............................. AAAGTATCGACCATAGCTTGCCACGAATGAGA 248 29 100.0 32 ............................. TGCAGCCTTAATCATGATTGTGCCAATGACTT 187 29 100.0 32 ............................. CTGAAAGATCTTGTAGATAGGCAGCTCGAATA 126 29 100.0 32 ............................. ACACTTTTGCAACCGAATTACTTGCTGCTGAC 65 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 100.0 32 GGAAATACCCCCGCGTGTGCGGGGAAGAG # Left flank : CCTGAAAATCACTCTTATCTCGGCTCACGGTAATAACGCGCTCTTTCTTTGCGAGCGCCTCAGCGTACTCTTCATGCACCTTTGCTAAGCTCATAATTTCTTCAGCTATACCGAAAGGTACGGGAGCGCGATCAGATTCCCAATTCCTTACGGTCTTTTCTGCTACTCCAAATATTTCCGCTATCTCGGCGAAATTTAATCCGATGAGATTACGCCAAGCCGCGAATTCGAGTCCGGTCATGTAGATTTCGGTCATAAAATTCTTACCTCCTTACCCTCTAGCCTATTACCGCTTTCCGGCAATTGCAAAACGTAAAGTGGTAATGTTATTGCGGCGTGAGTCACATTTAATTATCGTAATCCCACTCAGCTATCAACTCAGGATTAATAGTAAGAGCGCGCGAAAGAGCAGCCACATACCAGCCACGCGGGCGTTCATTGATTGGATAACTGGATTGGCTGCGCGGAATAAGAATCTCGCTATTGTGCTCTAAATACTC # Right flank : GCGCCTTACCGACTTTCATTAACCCTCTACCCGGGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAATACCCCCGCGTGTGCGGGGAAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [28.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 8-2293 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAPW01000032.1 Arcanobacterium haemolyticum strain NCTC9697, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 8 29 100.0 32 ............................. CTGAAAGATCTTGTAGATAGGCAGCTCGAATA 69 29 100.0 32 ............................. ACACTTTTGCAACCGAATTACTTGCTGCTGAC 130 29 100.0 32 ............................. CGCCTTACCGACTTTCATTAACCCTCTACCCG 191 29 100.0 32 ............................. CCGCATATTTAGTAGCGGCAAGTTCCTTGATT 252 29 96.6 32 C............................ GAGTATAACCAGCTTATTTCGCGCAGATTAGA 313 29 100.0 32 ............................. AGCTGCGGTGGCCGTTCAGCTTTGCATAGAAA 374 29 100.0 32 ............................. TGTAAAGCCATTGGTAAAAGACTCTTAGCGTA 435 29 100.0 32 ............................. CAGACATATAACGGCGCACAGATACACATACA 496 29 100.0 33 ............................. AAAGAAAACCGCTACAGCTTAATGAAAAGCAGT 558 29 100.0 32 ............................. CTTGCGCTTGAAGCATACCATCCCAAATAACA 619 29 100.0 32 ............................. CTCTTTTGCCGACCATTTTCTTCCTCCATTAA 680 29 100.0 32 ............................. GAGCTTGTCGGTGTGGCGGTAGGTGAGGTTCG 741 29 100.0 32 ............................. CTAACAGCTCCTGAACCGCACGAATATCATGA 802 29 100.0 32 ............................. CTTTCGATGGACTTACCTTAGAGCGTGAAATA 863 29 100.0 32 ............................. GACTGATTCGAGCTTGTGGTTAGTGCGGGCTT 924 29 100.0 32 ............................. CACTGAAAATAGCATTAATGATCTGGCCAGCT 985 29 100.0 32 ............................. CTGCGCTTCGCTAACCTGTATGGCGCTAACCT 1046 29 100.0 32 ............................. TACGCGATTGTGTAACCGTCGGGAGCCGGTAT 1107 29 100.0 32 ............................. CTATATCGGTTAGATAGATTTTTGGCAGACTT 1168 29 100.0 32 ............................. AAAGTGCGCGGTTTACCCATGCAGGGCGCATT 1229 29 100.0 32 ............................. GAATGGATTATCCACGAGTCTGCTTCTATGCC 1290 29 100.0 32 ............................. CCTTGCCAAAAAGCGCGGAACGAATCCGAGTA 1351 29 96.6 32 A............................ CCCTATCAGCTTGTGGCCCTCAGAAGGCAGAA 1412 29 100.0 32 ............................. CGAACGCATAGCCGCACCCAGGTTGTGCGGAT 1473 29 96.6 32 C............................ ATTAATACTCAATGACGCAATACCGTTGTTAA 1534 29 100.0 32 ............................. ATCAAGCCTAAAGCGGCATAAGAAAGTTCTTT 1595 29 100.0 32 ............................. GCTACAAGGCTTGAAACTGCCGGAATAATCGT 1656 29 100.0 32 ............................. AAAAAAGACCACATCGCCGGGTTGTGCTGAAC 1717 29 100.0 32 ............................. GTCATAAAATTCTGGCGTCTTATCTGGGGTTT 1778 28 96.6 32 .......-..................... TGAAGGTGGCGATGAGCTGGAAATTTATGGTT 1838 29 100.0 32 ............................. GTCCCTTCCTACGGGCAGGCAAAAGGCTAACC 1899 29 100.0 32 ............................. GAAAACGTTCTGATGATCCTTCACCGGTCACT 1960 29 100.0 32 ............................. ACCTCTATAAGCTCGCCGCTCTGGGTGTAAAT 2021 29 100.0 32 ............................. CGGATCGTGAAGAAGCACCAGACGCATACACA 2082 29 100.0 32 ............................. AAAGAAAGTATGCAGATGAAAATTAACTGGCG 2143 29 100.0 32 ............................. GCTTCAGGATCAGAACGCAACGCCGCCACAAG 2204 29 100.0 32 ............................. TTGAAATACCAATAAAATAAGGTGTAAACAGT 2265 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.6 32 GGAAATACCCCCGCGTGTGCGGGGAAGAG # Left flank : ATGACTTG # Right flank : CATCCTTCGGAGCTTCACCGTCTTTCGCTAACGGAAATACCCCCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAATACCCCCGCGTGTGCGGGGAAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [8.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 1 394-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAPW01000030.1 Arcanobacterium haemolyticum strain NCTC9697, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 393 29 100.0 32 ............................. AATTCTCTCATTCGCCTCTGCTTCGTCTAGCG 332 29 100.0 32 ............................. AAGAAAGGAGACAAGCGATGAAACAGCAGGGT 271 29 100.0 32 ............................. CATTTCATTGTGTCCATGCTCTAACCATACAC 210 29 100.0 32 ............................. TGGAATGTCGCCTTCTTGCTCCTTGACCGGTT 149 28 96.6 32 .....................-....... AATATCAGATAGGGCGGCGTATCCGAGCAGGG 89 29 100.0 32 ............................. CGGAGTGTCAGGACGGCGCTTGGAGCTTTCTG 28 28 96.6 0 ............................- | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.0 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TTCGACGCGACATCCGAACTTTCATTCATAAAAAGCACATCATGCAAGACATGCTTGCTACTTTGATGGACATTTTAGAACCACACCTTCCTTCACGAAACGATGACCGATTAATCGACGATTTTGGCGAAGTTTCTGGACACACGCAATACGGAAAGGAAGATGATGTTTGCAGTAGTAACTTTGACTGCGGCTCCTGATCATTTACACGGGTATTTGAACAGATTCCTCACAGAAGTAGATAGTGGTATTTATGTAGGAAATATTTCTCGAGCCGTTTGTGAAAAATTGTGGGAAAGAATCGGAGAAGTTACTTTTAACGGAAATGCAAGTATAATTTATAGCGACAACACGAGAGAACAGGGGTTTTCAGTGAAAACTAAAGGACGCACCGCGTGCGACATTGTTGATCTAGACGGAGCTATCCTTATCTCCAATCGTGTTGCGCGCGGTGAACAAAAACTCCGTTGCAACCGCTGAAAAAGCGCAGGTCAGTTAGT # Right flank : C # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //