Array 1 41576-31909 **** Predicted by CRISPRDetect 2.4 *** >NZ_VBSS01000005.1 Lactobacillus delbrueckii subsp. lactis strain FAM 21784 FAM21784_scf0005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 41575 28 100.0 33 ............................ TGGACTAAACAATCCAATTACCAGCCCTACCCA 41514 28 100.0 33 ............................ TACGTCACTCCAGCCTCGGTGCATGCCTTACGG 41453 28 100.0 33 ............................ TCTTCAGCCCGGCAAATTCACGAGCACCAGTCA 41392 28 100.0 33 ............................ CACCCATTTCCGCCATTTTCTACTTGCAAGACA 41331 28 100.0 33 ............................ TGCTTACAATATACGAAAACTAAAAATGTATAG 41270 28 100.0 33 ............................ TCAATTTTAAGCCGTTTCAGTATAGACCATAGG 41209 28 100.0 33 ............................ TATCGAACACACAAGCAGGCGTACAGATAAGCC 41148 28 100.0 33 ............................ GCCTTAGGAGGATTTGCTGTACAACTGGGGTGA 41087 28 100.0 33 ............................ TAAAATCATTCCATTTCCTGTAGCCGTCAGCAC 41026 28 100.0 33 ............................ TGCAATCGAAGCCGGCCAGTTTGACGCCGTAGA 40965 28 100.0 33 ............................ TTTTAGTCATGAACGGCGGCCCCACTGTGTGGG 40904 28 100.0 33 ............................ TTGGTGACTTTTTGTGGAACGGGTTCACCGACC 40843 28 100.0 33 ............................ TTGACTAAGGCTTAAAGCCTTTTTTGCTTGATC 40782 28 100.0 33 ............................ CGGCGGTGTCAACCCCTACGCCGGCCGGGTCGG 40721 28 100.0 33 ............................ TGAAATGCTCTTCACGATAAGTCGATAAAACAT 40660 28 100.0 33 ............................ CCATCGATGACGTCTATGTTGACCATAACCCAG 40599 28 100.0 33 ............................ CATGCTGCCTGCACCGGAAATAACATCGTGAAA 40538 28 100.0 33 ............................ CAACTACAGATGCCGCATATAAGCCTTCTAAGA 40477 28 100.0 33 ............................ TATCTTGCTTGCCGTCGTAATAGTCAGATAGTT 40416 28 100.0 33 ............................ TATCGCCAATGGCATACTCTACAACGAAGAGAC 40355 28 100.0 33 ............................ CAATCGGTGTTGGCGTGTTTTCGGCCAACTTAA 40294 28 100.0 33 ............................ TATATTCGGCTTGGCAATGCTACTCAAGCCGCT 40233 28 100.0 33 ............................ TTCCTTCCGTTTTTCATGATTTCATCACAGTAG 40172 28 100.0 33 ............................ TGAAATCCGCTTGACGGTTGCCATTCTGGTCCT 40111 28 100.0 33 ............................ TCGGCGGTTCAATCACTACGACCGTCTCCAATG 40050 28 100.0 33 ............................ CAGTGATGGGACTGGCAATGAGATTGTCCGTAA 39989 28 100.0 33 ............................ CCATTGACTCAATCTTTTGAGCAACCATCAAAG 39928 28 100.0 33 ............................ TTCAGAAATCTACTCTGGCACGGTTTTCGTTGG 39867 28 100.0 33 ............................ AAGCATCAGTAAGATTTGACAAAGGGCCCAAAA 39806 28 100.0 33 ............................ TCTAGACCTTCCAGTAGATAATTGCAATATTCC 39745 28 100.0 33 ............................ TGGAGAGGGGAGTTTTTTGAGGAGTTTTAATTT 39684 28 100.0 33 ............................ CAAATTTCACCCCCCGTCAAGTTCTAAGAAAAA 39623 28 100.0 33 ............................ TGGTCTGAAAAAGATATCTTTTTGATGTGTTCA 39562 28 100.0 33 ............................ CTGTATCTATTCACTTTAAAAGCAACTGATTTT 39501 28 100.0 33 ............................ AGCGACTAGCAACTTCAAATGAATTGTCTTACG 39440 28 100.0 33 ............................ TGCAAGACCTTTTTAAAACTTTTTTGTTTTTGA 39379 28 100.0 33 ............................ TTTATAAGCAGTTATATCTTTTTACGTTGAAAG 39318 28 100.0 33 ............................ TTAAACAGGCAGGTATTGTAGGCTTGCTGTTTG 39257 28 100.0 33 ............................ TGTGTTCATACATTAAAGAGCATGAGATCCTTG 39196 28 100.0 33 ............................ CCACAAACGCAAGCCAAGCAAAAAGCTGCTCGT 39135 28 100.0 33 ............................ TACCGATCGCGATCGCTTGTCTAGTAGAATCTT 39074 28 100.0 32 ............................ CAAAAGGCCTAGCATTTTGCTAGGCCTTTTTT 39014 28 100.0 33 ............................ GTTTACCAGTTGTGCCTTAGCCAAAGCCTTTAA 38953 28 100.0 33 ............................ TCGTATCTTTTAGCAGCCCTAGACTGTAGGCAT 38892 28 100.0 33 ............................ CAAGACAAGATAGACAAGCAGTAAGACAAGACA 38831 28 100.0 33 ............................ TTATATATATTTGCCGACAAAAAACCTGTTGTA 38770 28 100.0 33 ............................ ACATTGGCGGCAAGCAGAAATTTACCCCAGCAA 38709 28 100.0 33 ............................ TGTCTGTATCGCTGTAAATAGGTTTTCCGTCCT 38648 28 100.0 33 ............................ TTGAATATCAAGATTACCCTTACTATCTAATGA 38587 28 100.0 33 ............................ TAAGTCTATTTCTATTTCCTTTACAGCTACTAA 38526 28 100.0 33 ............................ TGCCTTGGCGTAGAAAGTCAACACATAATCTGT 38465 28 100.0 33 ............................ AATGTCCCCAGGCTGGTGTATTCAAACTTGCCA 38404 28 100.0 33 ............................ AATATGGTGTTGATGTTGCTTCATTTCAACCAA 38343 28 100.0 33 ............................ TTATTTTGTCGGTTGCTGCTAAAAAACAAGACC 38282 28 100.0 33 ............................ CGGTACTGTTTGGATTTTTAGACAAATCTTTCA 38221 28 100.0 33 ............................ TCACAGAAAAGATGGAAAACCCGTGCTATGTTG 38160 28 100.0 33 ............................ TTAGATAGCGTGATAAGTATTTTTGAAAGTGCT 38099 28 100.0 34 ............................ CATGCAAAACGGGCGAAAAACAGGGCGAAAAAAG 38037 28 100.0 33 ............................ CCCCTACGCCATCCGGATCGGTGAAACCGTCCC 37976 28 100.0 33 ............................ TGGAAAGATTAGGAGGCAAAAAATGGATCTGAA 37915 28 100.0 33 ............................ TCGACTTCATGCCGTTCCAGGCGTCGCTAAAGA 37854 28 96.4 33 ..........................T. AATCAAGCTGTCTTTGTTGTTAACCAGGTCGGA 37793 28 100.0 33 ............................ TTGATCTCCAAATGCCGTTACACCATTCTCTGA 37732 28 100.0 33 ............................ TTTTTTTTGCTTTAAAACCCCCCTTGATGCCTT 37671 28 100.0 33 ............................ CGGCTATTTGCTTGGCTGGCTTTCGTGGTCGGT 37610 28 100.0 33 ............................ GGGGCTTGCATTTGAAACTAATTAGCGCTATGA 37549 28 100.0 33 ............................ TGTCGGTATCACTATAAATTGGCTTACCGTCCT 37488 28 100.0 34 ............................ CCGACAACGCGACTTATGAGCAGCTGCTCGCTTG 37426 28 100.0 33 ............................ TCATAACACGATCAAGCTCAAATACAACCCCCT 37365 28 100.0 33 ............................ CTTATGAACAGCTGTTCTCTTGGCTGGCTTTTG 37304 28 100.0 33 ............................ CTAGAAAAAGTTGATCGATTGGTACCGAAAAAG 37243 28 100.0 33 ............................ TCCTCTGCTCCAGTTCATCTTTTGGCCGCTTAA 37182 28 100.0 33 ............................ CTTACTTGTATGGTCAACTCTATAGTGAACTTG 37121 28 100.0 33 ............................ TATGCTTTTAAATCAGTTGGTTGAAATGAAGCA 37060 28 100.0 33 ............................ TTGCTAGTGCTCAAGCATTCATTAATAAGTTGG 36999 28 100.0 33 ............................ TTGACCTTAATAAGGGATAGTGATTAAAGTGTT 36938 28 100.0 33 ............................ TGACGCCAAAAGATGTAGGGGATATGATTAGCC 36877 28 100.0 33 ............................ TTTCGTTGGTTTGAGTTGTCCCCTTTTTTGTAA 36816 28 96.4 33 C........................... TCCACTCCGTCTGGAGTCAAGACCACCGGGTCA 36755 28 100.0 33 ............................ TAAATATAGAAAGTAAGAAATGAGGTACAAAAA 36694 28 100.0 33 ............................ CACGGCCAACACTAGAAATGTTTCACGTGAAAC 36633 28 100.0 33 ............................ CTTGCTATGATTAAAAGCGTCAAAAGCAAGGCG 36572 28 100.0 33 ............................ CTCAATTTCTGGCGCGTTGACTGGGCTTATGCG 36511 28 100.0 33 ............................ TAGAAACTTTTAGAACTGAATAACCAATTGCAA 36450 28 100.0 33 ............................ TTTTAAAAGGTCTTGTATTTGAGCTTGATCGTG 36389 28 100.0 33 ............................ CTGAACCCCGGCAAGGGCCGCCCCGTCAAGTAG 36328 28 100.0 33 ............................ CCCGTCCCAAAGAAAGCGCCCAATTTCACGCGT 36267 28 100.0 33 ............................ CTGTTAAGGCGTCGGAGGAGATTTTCCATGTTA 36206 28 100.0 33 ............................ TACCGTTCAGATTGTGAGGCTTGGCTAGATGAT 36145 28 100.0 33 ............................ TTAGTTTCAAATGCAAGCCCCTTTTTTATTTTT 36084 28 100.0 33 ............................ TAATGATTTAGGGGCAACTATAGTCAATGCCAT 36023 28 100.0 33 ............................ CAATGGCCTCCGCCAATGGTGGCAGAACTTACA 35962 28 100.0 33 ............................ TCGATGAGCTGTCCTGCATAGCCTTCTGGACGG 35901 28 100.0 33 ............................ TTGGTGTAGGTCTTGGCAGGGACTATCGTGTGA 35840 28 100.0 33 ............................ CGTTAACAAATATATGCGGACTATTCGGCTCAT 35779 28 100.0 33 ............................ CGAACCATATACCATTCAAGAGGAGCATTATTT 35718 28 100.0 33 ............................ TCATAATACCTTTTGAATCAAAATGCAAGACTT 35657 28 100.0 33 ............................ TAAGAAGCACAAGAAATTATCGACCGCTCTGGT 35596 28 100.0 33 ............................ TGTAGGTTCTTGCAATTTGACCATCAAATTTTT 35535 28 100.0 33 ............................ CCACGCCTTTGTAATCGGGGCTGGACAGGTCAG 35474 28 100.0 33 ............................ TACAGCTTAGATCTGGAAGGTAGTAAAATGATG 35413 28 100.0 33 ............................ TACGTTGTGAAGCTGAGCGACGGAACTTACTTG 35352 28 100.0 33 ............................ CGATTGAAGAGAAAAAATAATTTTTTAAAAATC 35291 28 100.0 33 ............................ CTTGTCGGGTCTACCAATGACGTAGCCCATAAA 35230 28 100.0 33 ............................ CATCTCTGAAGCGAATGGGGCTTTAAAGGCGTT 35169 28 100.0 33 ............................ TCAGTAGCGCTCTTTATCAGCTTGGCAGTGTTC 35108 28 100.0 33 ............................ CCTCGGATTATAAGAAATCACGGTCTTGGAAGC 35047 28 100.0 33 ............................ TTGCCACCCCGGTCTATATACTTCGTATTCTTG 34986 28 100.0 33 ............................ CAAAAAAGACCTTTGAATCCTTGATATATAAGA 34925 28 100.0 33 ............................ TCCAGTTCGGTGAGTTTCAGACGGTGACGCGGA 34864 28 100.0 33 ............................ TTGGGACATCTACCCGGACTCTGATGCTAATAG 34803 28 100.0 33 ............................ CAGAAAGTTATTCACGCTGGTATGATACCGTTT 34742 28 100.0 33 ............................ TACTTAAATTGTTGGTCAAGTGAATTAAGATTA 34681 28 100.0 33 ............................ TAAAAAAGAGGAGACCCTAAGGCCTCCCCAAAA 34620 28 100.0 33 ............................ CTGAATTGGGGTGGTCATTATAAATTGGAAAGA 34559 28 100.0 33 ............................ TAACTGTATCGGCATAGTAGCTGTGGATGCCCC 34498 28 100.0 33 ............................ TGATGTCAAGCGGACTAGCCATGTCACTAACCG 34437 28 100.0 33 ............................ TCTCTGGAATTGAGTCAAGCGTTGCATACACCA 34376 28 96.4 33 .....................A...... CGATCCGTACGACAGCAACTCCCGATTACACAA 34315 28 100.0 33 ............................ TGTTGAAGTAGTGCCGTCTGGGAAAGTAACCTT 34254 28 100.0 33 ............................ TGCGTTGAAAATTGCCTGAACGGTGCTGGTGCC 34193 28 100.0 33 ............................ CAGACGGCTAATGGTCTGACTAGCACGGTAAGC 34132 28 100.0 33 ............................ TTATTGCTGAAACCAGGCCACCAGGAGCTCATG 34071 28 100.0 33 ............................ CAACAACATTGGCGATTTGCTTAGTCTGTTGGT 34010 28 100.0 33 ............................ TAACTTCTTGTTAATTTCAGAAAGAGACTCCTT 33949 28 100.0 33 ............................ AAATCGAGACTCCAATGCTTGCGGTAACAACAG 33888 28 100.0 33 ............................ TTGATTCTATTTTACGAAGTGAAGCTAGTGTTT 33827 28 100.0 33 ............................ GGAGATACCAAAAGCAGAAGCCAATTGGTACCG 33766 28 100.0 33 ............................ TATACTATAAACCTTACTCTCCCAAGGGATAAG 33705 28 100.0 33 ............................ TATAAACCGCCGTAAATTTGATTGTTACGGCTG 33644 28 100.0 33 ............................ CAGAGTTTTTAAAATTCATTTTTTATTATCTCC 33583 28 100.0 33 ............................ TGAACTTGAACAATCGATAACCAGCTGGCCAAT 33522 28 100.0 33 ............................ CCGTCGACGTTATCCATATGACTAAGCACGCTA 33461 28 100.0 33 ............................ TGAGGACATTGAAACTATGTGTAAGTTCATTAG 33400 28 100.0 33 ............................ TTTATGGGGCGGTAGAAACTGCTTGGAAAGAGG 33339 28 100.0 33 ............................ TAAGACTTATACTGTAGTGCTTTCAGACGGGAG 33278 28 100.0 33 ............................ CATTATTAGTAAGATTGACCGCTCAAAAATAAG 33217 28 100.0 33 ............................ TGGTGCCATTCTCTTCTTTGACGCCAAAACTGG 33156 28 100.0 33 ............................ TACCTTAATTGCTGGTCAAGTGAGCTTAGACTA 33095 28 100.0 33 ............................ TTACGTTAATTTCGGCGTATTCGATCTTGAGAA 33034 28 100.0 33 ............................ CTGAAATACGTTTGAATGCGTTTGATGATGGTA 32973 28 100.0 33 ............................ TGGGAAGTTGCTGGCAAGCTTTAATTGTCACGA 32912 28 100.0 33 ............................ TAAAAAACTCGTGAAAGCGTCCAATGCCTTCAC 32851 28 100.0 33 ............................ CGAGCACGGTTGACTTGCTGGCCGCTACGCTGT 32790 28 100.0 33 ............................ TTACAGCGAAAGCAGAGTTAGAAACATTGCCAA 32729 28 100.0 33 ............................ TTACAGCGAAAGCAGAGTTAGAAACATTGCCAA 32668 28 100.0 33 ............................ TACTTATAATTATAACGGTTATCTTGACAACTA 32607 28 100.0 33 ............................ CGGTTGAGCTGATGACCGAAGCAAATGTTTACG 32546 28 100.0 33 ............................ TGTCCGGCATGCTCTAAGAACGGAGAATTGCCG 32485 28 100.0 33 ............................ CGGTTGAGCTGATGACCGAAGCAAATGTTTACG 32424 28 100.0 33 ............................ TTGGCAGCATGGTTGCTGAAGCAAGTTCCCAAG 32363 28 100.0 33 ............................ TATAACCAAACTCATTTAAGGCCGTTGCTTCAA 32302 28 100.0 33 ............................ TGCGAGTTTGCGGATCGCTTTGAGTACTGGAAG 32241 28 96.4 33 A........................... TTAGGCTTCTTGGATGAAAAACTGGTCAGTGAG 32180 28 100.0 33 ............................ CATCCATTATCACCCGTTTTTTGTAACCGCCTA 32119 28 100.0 33 ............................ TGGGACTAGACAATGTGCTGAACATGGAGCAGG 32058 28 100.0 33 ............................ CTTATACTAATGCTTCTGCTTCATCTTTCCATT 31997 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 31936 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================== ================== 159 28 99.8 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTGGATAAGGAAGGCGTTCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAATAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : GTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGGTAATAGGGAAGGAGTGAGGAACAAGCGTGAGCATTTACGGAAAGTATGCCGACTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATATGGGCACCTGGAAGGTCGCGTCAAAGGAGAAGAAAGCATGACGCAAAAGTGCGAGAGAAAAGGTATGCCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGCTCATAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //