Array 1 1377-153 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSVY01000034.1 Ligilactobacillus salivarius strain FBJSY20_2 scaffold34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1376 36 100.0 30 .................................... TCCGGGTAGTGAAATACACGCTATCCATGG 1310 36 100.0 30 .................................... TTGGGCTAACTATGTTGTGGATACATACAT 1244 36 100.0 30 .................................... GAGAGTTATATCTTCTTTACGTCTAACCCA 1178 36 100.0 30 .................................... AATTGGTGTATCCTGAAATCTACTTTTTGA 1112 36 100.0 30 .................................... ACAACAAATGTTAGCAGTGGCTGACTTACA 1046 36 97.2 30 ....................T............... CAATAATTGCATCTACCACGTCAATCTTAA 980 36 100.0 30 .................................... TTATAACAAGAAAGATTTTTATCAAAATAA 914 36 100.0 30 .................................... TTCAGATATTAGAAAGAAATATCAAGATGA 848 36 100.0 30 .................................... AAGGAAAGTTAAGGTCAATGGTTTTACATT 782 36 100.0 30 .................................... TGGTCAAGTCGTCAATCTCACTAGGTGTTA 716 36 100.0 30 .................................... TGAGGCTTATATGTCACAACTCAATGCTTT 650 36 100.0 30 .................................... GCATTAGACGCTAAAAAAGTACAGTTAAGC 584 36 100.0 30 .................................... TTTTTTGATAGTCTGTAAACTCTAGCTCTT 518 36 100.0 30 .................................... CGCAATTTTCGATATTTTACCAATCAACCC 452 36 100.0 30 .................................... ACAACACTGGATATTTTAAGTTGAGAGAAT 386 36 100.0 30 .................................... TTTAGTGGTAACTCTAGTGGCGTAGCTCTT 320 36 100.0 30 .................................... TAAAGACGCTGGATACACACCAATGGTTTA 254 36 100.0 30 .................................... ACAACTGGAGTTTGAGTACGTTTAGCTTGT 188 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 98.8 30 GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTGATCAAGAAGATTATTGAAGACATCACAGATGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGTGAGATTTTGTATAAAATTGATATACCCTTACAAGCAGATTATGATAATGATTTAATAAGACTATTCAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAGTGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTATATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACT # Right flank : CTAAAATACAAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGAGTAAACACACTATAGTGTGACATTACAGATAAAAAGGCCCTCAAAATCACATTTTCCTAGTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //