Array 1 26743-24318 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHONX010000006.1 Bacteroides caccae strain DFI.3.33 PHNPCJHC_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 26742 47 74.5 30 TAAA..CC.ATA..A......G....T.................... AGAAAGGAAGAATTTTACAGGAAATGCACT 26665 47 97.9 30 ..............C................................ ATAACAAGAACGGGGAAAGTGATAAGGCCG 26588 47 100.0 29 ............................................... TGGCAGATGGTAATGACGGCACGGACGGT 26512 47 100.0 30 ............................................... TGAAGAAGCAGAAGAAGAAGCAGCACCAGC 26435 47 100.0 30 ............................................... GAGTGAATTCACAAGATTTGCCATTACGGA 26358 47 100.0 30 ............................................... GCAGCACCAGCAGCAGTTGCAGCAGAAGTA 26281 47 100.0 29 ............................................... GCCAGCTTGAGAACCAAGAACATCCTTGT 26205 47 100.0 30 ............................................... CGAAACCGATGATATTCGTGAGCTTATTAC 26128 47 100.0 30 ............................................... CAGTGCATCAAGGCAAAATTAGAATATGAT 26051 47 100.0 30 ............................................... GCGCTGCTGCTGTTGAATTCCGAAAGAATT 25974 47 100.0 30 ............................................... GTATATCGGCCATTTTTGAAACTCTGACGG 25897 47 100.0 29 ............................................... TGCAGCTTAGTATCAAAAGAAGATTGCTT 25821 47 100.0 30 ............................................... AACTGGATTAACACAGAATGGATTGACGGA 25744 47 100.0 30 ............................................... ACAGCCGTTTTTCCTTCCAATGACGGAGCC 25667 47 100.0 30 ............................................... ATATCAGTCTGTTTCTTCTCGCTCATCATT 25590 47 100.0 29 ............................................... GTAATAGGGATTGTTACGATTATCACGAT 25514 47 100.0 30 ............................................... AATGATAGCTGCAACCGTAGTAATACAGGT 25437 47 100.0 29 ............................................... AATAATGAGTTTAATGCTGCCGAGGCTGA 25361 47 100.0 29 ............................................... GACATATTCGCATTATTGGCTTTATTTGT 25285 47 100.0 30 ............................................... CCAATCTTTGAGAGTAGTGGTAAATGCACC 25208 47 100.0 29 ............................................... GGCTTCTGCGTTGAAAATGATGTCGGAAA 25132 47 100.0 30 ............................................... TATTGCGCAATTTTAATAAGAGCATCAGCA 25055 47 100.0 30 ............................................... CAAAAATTATTAATTTCACGCGCGTGTTAC 24978 47 100.0 29 ............................................... TTTTACAATGCCTGGTGATAAATTTACCT 24902 47 100.0 30 ............................................... AGAATTACTATGAAGTACATTATATTCGCA 24825 47 100.0 30 ............................................... ATGTCCGAGGACCATATTCTGATACAGCGT 24748 47 100.0 30 ............................................... ATAGACAAGTACAAAGGTTGGCTAGAGAGC 24671 47 100.0 30 ............................................... TTCATGTTTATGTATGAAGATAGGCACCGG 24594 47 100.0 30 ............................................... TTCATAATCAAAAATTTTTATGAAGTTTAA 24517 47 100.0 30 ............................................... TTATGATTCATTAATTAAAGACGCTGAAGA 24440 47 100.0 29 ............................................... ATTCTGAATAAGTATCTTGACCAACAGCA 24364 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 32 47 99.1 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Left flank : CTTCGCACCTCTTTACTCTTTGAAAGAGCAAATCATGCAGAGTGACAACAGTCTGATTCAACAGACAGTGGGTACCGCTTTTGATATGTGGCAGAAATTCGCGTTCACTATCGTATTGATTTCCTCCTTCATCCTACTGTATCAGAAAGCTAAGTTTCAAAAAGCTGTTTCCAGCCTCCGCTTTTACGGCAAGATGAGTCTGACAAACTATATTTCCCAATCTGTTCTGGGTGCCATTATCTATTTCCCATTCGGATTTTATCTGGCTCCTTACTGCGGATATACTCTAAGCTTGATTATAGGTATTGTTCTTTGTATCTTACAGGTTCAGTTCTGTAAATGGTGGCTGTCCGGACATAAACAGGGACCATTGGAGACGATATGGCATAAATGGACTTGGATAGGGAGCAAATAATACAAAAAATGTATGAATTGAATAATTTGAACTATAGAACAACATATTATGGTATTTATACGGGACAATTAGGTTTTGTTCTGTA # Right flank : ACAATCGCCATTAGCCGCTGTATTTCAATAAGTTAGATCACAATATAGAAAAAGAAAATGAGCTGTAAATTCATTAAAAAATCCCGTAGTCTTACGGGATTTTTTATTCAAAATAACTCTAATTGTTGTCCTGGTGTATTAACAGATAATATTTTCTTCCCATAAAAGAGTTCAATATTCTCAAATTGCTTATCAGTTATGCACATTATTCCAACCTGACCATATTCTGGCAAAAATGATTTTATTCTTTTTATATGAACCTCAGCATTCTCACTACTTGCACAATGACGAACATAAATAGAAAATTGAAACATAGTAAAACCATCTTTCTGTAAATTCTTTCTAAAATCGATATAAGCCTTTTTATCTTTTTTAGTTTCTGTTGGCAAGTCAAAAAGCACTAATATCCACATAATACGATATTCACTAAAACGATCCATTACTTCTCAGGATAAATAATACGACGAAGCTCTCCAGTAAAACATTTATAAAGTGAAGCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //