Array 1 8171-9320 **** Predicted by CRISPRDetect 2.4 *** >NZ_APMH01000035.1 Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 strain ATCC 25755 contig36, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 8171 30 100.0 36 .............................. AACCTCATATATCCTGGACAAAAGTTGGTGATACCA 8237 30 100.0 36 .............................. TCATCATTACTTGTAATATGACCACAATTTGATATA 8303 30 100.0 36 .............................. ATTGGAGTATCAAGACAATCAGTATCTTTGTATGAA 8369 30 100.0 34 .............................. TTACATCTGCTATATGGAATACTGCACAGAGACT 8433 30 100.0 37 .............................. GCTAATGATATAGATAGTAAAGAAGCAGAGGAACTTA 8500 30 100.0 36 .............................. TTAAATAAAAATAAATAGCAAAAATCCGTTAAACAG 8566 30 100.0 36 .............................. CTGCTCATACATTGTCAAAATAGACATCATGGTATC 8632 30 100.0 38 .............................. GGAAGATTTTTAGAATTACAGAAGAAAGCTGATGAACT 8700 30 100.0 36 .............................. GCTCTTCTTCAAGTGCTCTGCATTCATTAGGAGTTT 8766 30 100.0 34 .............................. AAAATACTATATCGCCTTTCGTCGCGTTTCCTTT 8830 30 100.0 36 .............................. TTATTGTATTTGCCGTCACAAACATCAATAGCAAAT 8896 30 100.0 37 .............................. TTTTATTAAATTCTTCTTTTAAATCGTCGTTTAAATA 8963 30 100.0 36 .............................. AGGTATGTTTGCAGTATCACTATTAAGTTTTAAATC 9029 30 100.0 36 .............................. TCCTCAGACTGGTTCCTTGATAAAACAGAAAAATGC 9095 30 100.0 35 .............................. GATTAGGTCTCAATTTAAGCAATGGATATAAATAA 9160 30 100.0 36 .............................. ATTTCTTGGGTATAACTAGTATACAACTGAAGTCCA 9226 30 100.0 35 .............................. CCAAAGAGGATATAGTTATACAATAAATCATAATG 9291 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 18 30 100.0 36 ATTTAAATACATCTCATGTTAAGGTTCAAT # Left flank : TAAATTTTGATAGTATATTATTCCACATTAAAGATTATTGTAGAGGGGATTGAGTTGATATTTATATAATAGATGAAAATAGCTATGAAGAACTTGTAAAATATAAATTTTTTCTTTATTCCTCATGGAGAGTTGGAGAAGCCAAAAGCTTTTATAGCATAATGGATTTGAGGTAGAAATACTCAAATTTTACTATCTTTTTCAATACTCGATTAAAAGTTTCAATTATTTCCCGAAAAGTAGATTTCTTGTACTTTTAATATAAAAAAATATATATAAAGACTACGAAAAATAATTGATGATCATGAACTTCAATCTATAGGATATATAAAGGTATCAGGTGGAATGTGTTTTGAAATGAAAAGATATCTGAAATACTTTACTTCGTACAAATATAAATTTTATGTAAACAATTCAAAAAAATATACGACTATATTTATTCAATTGATTTTTGTCTAGTTTCAATGCCAATAGCAATGCACGGAGTGCATTACAGAGTT # Right flank : TCACAGTAAAAGAGTCATTCTCTAAATTCATTATAACTCCCAAACCATTGAAAATAAAGCCATCTAATAAAATTTTTCCAACCATTTTGTATTATCTCACTTTAGAATTAAGAAAGATTACAAATATACTTATATCAATGTCTTATAGCATATTTAAAAGTAATTGAGGTTGGAAAAATTATTTATCTATATTATTAAAATTCAACTATATCTATTTCTGTGAAATATGCAATGGTATTAAAGGATGGCCTAAGGCCTTTTCTATTTCAAAAACAATAATAAAAGTAATAACACTTACAACTGATCCCACAATAACAGCCATAATTCCAAAAGGTTCATTGAGATATTGCCACCAGAATCCAGCAATACTTCCAAGAATTATAGACAGTATACCAGCATGCTTTGTAACATTTTTCCATGTCAAACCAAAGATGAATGCTGCAAAAGGACCAGCTGACCTCATGGTGAAGGCAAATACAAGCATAGGTATAATCTGTTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTTCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 72590-73217 **** Predicted by CRISPRDetect 2.4 *** >NZ_APMH01000006.1 Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 strain ATCC 25755 contig7, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 72590 30 100.0 38 .............................. GCATTCAGACTTGCAACTGTAACTCCCTAGTACTCCCC 72658 30 100.0 37 .............................. GCAGACGTTATGGTATTTGATGCTATTTCATTGGCAG 72725 30 100.0 36 .............................. TATTCTACTCTTGACATTGCTTGAACTTCATAATTA 72791 30 100.0 37 .............................. GCGGGAATGACACTTGATACTTTCGCATCTACAAATG 72858 30 100.0 34 .............................. AAGTCAAACGGATCTCTACCCTTTCTTTCAACAT 72922 30 100.0 36 .............................. AATCTAAAAAAATCCACACTGAGTTGTCCGGCAGTA 72988 30 100.0 35 .............................. AAAGCAGACATAGCATTTACATACTCTTCATTTGT 73053 30 100.0 37 .............................. ATGGTGGGTTGGAACGAATATTGATGGCATTTTTTAT 73120 30 100.0 35 .............................. CCCATAGAAGCTCTATACTTGCCCATATATCACCT 73185 30 80.0 0 ............A..TT..AA....A.... | TT,A [73199,73205] ========== ====== ====== ====== ============================== ====================================== ================== 10 30 98.0 36 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : ATTTAGTTTGAAAAATATGATATAGTATGGAGGATTTTAATGGGAAAAAATTTTAATTTTAATTATGCTTTTGTATTTTATGATGTAAATGAAAAAAGAGTAAATAAGATATTTAAAATATGTAAAAAGTATTTCCACCATCATCAAAATTCTGTTTTTAGAGGATCTATAACTCCATCTAAATTAATAAAATTAAAAAGTGAATTAAATAAGATCGTAGCAGATAAGGATTTTGTCACAATCATAAAACTTATAAATGATAGTTGCTTTGAGGAGGAAACTTTAGGTATAAATGATAAAAATACTGAAAACTTGATACTTTGAATTTTCCAACCTGTTTGCTATTTAGAATCACTTCAATTTATTTAGAATCAATGGGTTACGTTATTTCTTATAAAATATATGCATAATAAAAATTGGTTGGAAAAAATTCAGCGAAAACCTTTATTTATATGCTTTCAAAGCTTATAATGAAATTAAAGAATGGCTATTTTACACAG # Right flank : TCAAACATTTTAATTAAAGAGACAATTATTATAAATAAATTGGTATAGAATTATATTGAATAAATCTATACCAATTTTTAATTTGATATCAAGCCTTTGTTAAAATATCTGTTAAACCCAATTTTTCTATTCTCTTTTTTATCTCATTTTTATCTGTAGTATATAGTCCCTTTTCTTTCATTCTGTTAAAATACTCTGCACCTGCAAAAGTGTATCTGTTTTTTCTACCCTCTGCAGTTTTAATTTTGTAATTGGCATAGCTTATTATATCTCCAATGGCAGTTTCAGTTGGAAGTACCAGCTCAGGTCTGCCGAGAGCATATCTTACTGCATTATGCCCTGCAAGAGAACCTGTACATATGGCTTCTGTATGACCTACGAATAAACCGCTTTTTTCTCCACCACAGAATAGGTTATCTACTCCTCGTACATGTAGATCATTAGAAACAGGGGCTACAGAAAGATATCTTATAGAATTTCCCTTGCCACCAGAGTAAGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //