Array 1 1071036-1067097 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP074585.1 Acinetobacter baumannii strain ATCC 19606 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 1071035 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 1070975 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 1070915 29 100.0 31 ............................. TTCACTGGATTACGTTCTAAGCCTTCCTGAA 1070855 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 1070795 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 1070735 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 1070675 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 1070615 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 1070555 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [1070504] 1070503 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 1070443 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 1070383 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 1070323 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 1070263 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 1070203 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 1070143 29 96.6 31 ............................T TTACCCTTGCCATGCTTGCCAGAATTAGAAT 1070083 29 96.6 31 ............................T ACCACCCATTGAACGTTAGCCATATGAGCAA 1070023 29 96.6 31 ............................T TCCATGCTTCACATAGAAATTCATTGCAAGT 1069963 29 96.6 31 ............................T ACTGCTTCCCAAGTCAGTAAAATGATTGTTA 1069903 29 100.0 31 ............................. CAGTAGTATCATTTCAATCGAGTAACGTTGA 1069843 29 100.0 31 ............................. AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 1069783 29 96.6 31 ............................T ACACGGCGATCTTGTTTAATAGTCTGAGTTT 1069723 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 1069663 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 1069603 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 1069543 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 1069483 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 1069423 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 1069363 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 1069303 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 1069243 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 1069183 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 1069123 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 1069063 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 1069003 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 1068943 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 1068883 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 1068823 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 1068763 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 1068703 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 1068643 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 1068583 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 1068523 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 1068463 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 1068403 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 1068343 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 1068283 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 1068224 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 1068164 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 1068104 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 1068044 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 1067984 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 1067924 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 1067864 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 1067804 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 1067744 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 1067684 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 1067624 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 1067564 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 1067485 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [1067460] 1067425 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 1067365 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 1067305 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 1067245 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 1067185 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 1067125 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 66 29 94.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTAA # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [75-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //