Array 1 27769-25119 **** Predicted by CRISPRDetect 2.4 *** >NZ_STDA01000016.1 Klebsiella pneumoniae subsp. pneumoniae strain SIKP107 116_NODE_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 27768 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 27707 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 27646 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 27585 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 27523 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 27462 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 27401 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 27340 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 27279 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 27218 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 27157 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 27096 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 27035 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 26974 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 26913 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 26852 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 26791 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 26730 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 26669 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 26608 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 26547 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 26486 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 26425 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 26364 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 26303 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 26242 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 26181 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 26120 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 26059 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 25998 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 25937 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 25876 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 25815 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 25754 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 25693 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 25632 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 25571 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 25510 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 25449 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 25388 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 25327 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 25266 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 25205 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 25147 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //