Array 1 358183-362454 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTTL01000001.1 Xanthobacter oligotrophicus strain 29k NODE_1_length_664547, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 358183 31 100.0 34 ............................... CGGCGCCGACCGGCGGCTGGATCAAGAGCCGGAA 358248 31 100.0 33 ............................... GGCACCTCCGGCGGAAAGGTCATCGAGGCCGAG 358312 31 100.0 35 ............................... GCTGCAATCGTCGCCTACAGCACGGCCACGATCAC 358378 31 100.0 34 ............................... GTTCGACTATTCGACGTTGCGCTGGTGGATGGCG 358443 31 100.0 34 ............................... CCTACGCCTCGGTGGAGACCTACCTCGCCGGCCT 358508 31 100.0 34 ............................... CATCCCGAGGGATGCCACAGCGTCGAACTCGACG 358573 31 100.0 35 ............................... TGCGCCACCAGCTCCTTGACGTGTACCAGCATGAG 358639 31 100.0 35 ............................... ACGCTGCCTGCCGGTGCCGTGCGCTACGGCGCGAA 358705 31 100.0 34 ............................... TCGGACCAGTACAAGCGCGGCAAGTACGTGGCAG 358770 31 100.0 33 ............................... AAAGATCCTCATGACGCTGCACGCGAGCAGGAG 358834 31 100.0 33 ............................... ACGATAATGGTCGTGGTCATTGTGCACTCTCCA 358898 31 100.0 34 ............................... GACGGCGAACAAGGCAATCCAGGTCGCGAATGCA 358963 31 100.0 33 ............................... CGGCCGGCGAGCATCCAGAGCGCTTCCACCAAA 359027 31 100.0 36 ............................... GCGGGGCTGGACCACGACCTCGGCGCCGTTCCGGCG 359094 31 100.0 35 ............................... GTGTCCTCAATAACGAGGGTAAGCCCAGGGCGAAA 359160 31 100.0 34 ............................... TATGGCAAGCCGAAGTCCTACCTCATCGCAGGCG 359225 31 100.0 34 ............................... AGCGTCATCCGCCGGAGCCCACGCGTCGAGGTCG 359290 31 100.0 34 ............................... AGAGGATGACCAAGGAGGATAAATTTTGCTCACG 359355 31 100.0 33 ............................... TAATCGAAAAGGCAAGCTATTTGATAAATCTTT 359419 31 100.0 36 ............................... TTGGCAATGTCGGTCGCCTTCCAGCCCATCCCCAGG 359486 31 100.0 37 ............................... ACTTGCCCATCCAGAGCACTGCCGCGATGGCGCTCAA 359554 31 100.0 34 ............................... CTCTATGGCTCTAGACAATCTCCGGGAACTTATC 359619 31 100.0 35 ............................... TTGCTGATGACCAGCGCCACAATCGCGACACCGGC 359685 31 100.0 33 ............................... CAATTGGGCCGAAGCCTAGTAAGCAGTGACATA 359749 31 100.0 33 ............................... GGCTTGGACATCCTGCCATGAGGTCGCTCTCGC 359813 31 100.0 35 ............................... CCGCGTGGGCGCCGATTTCCTCGGGGCAGGTCGCG 359879 31 100.0 34 ............................... GTCTTCGCAGCCCCAGCCGGCGCGGCAGGCGCTC 359944 31 100.0 36 ............................... ACTTGTGGAGGGGCAATCTAATGGAGCCGGAAGACG 360011 31 100.0 34 ............................... CTCATCGGCACCACGCTGGCACCGGCGCAGGCGC 360076 31 100.0 36 ............................... GCGTTCGCGCAGACCATCGGCGCCGAAATCCCCGAC 360143 31 100.0 34 ............................... ATGCCCTACGACCAAACTTCGGGACTGGCACAGT 360208 31 100.0 34 ............................... GCCAAGTGGAAGCAGTGGAGCGAGTCCGGTAAGG 360273 31 100.0 35 ............................... TGGTACATGGTCAGCCGCAACCGCTCCATGAGCGG 360339 31 100.0 34 ............................... CTCTCGGACCTGCGCAACGGCACGAGCATGTCCG 360404 31 100.0 33 ............................... CTGGTCAATGAGGACACGGGCGGAGGGGTGCTG 360468 31 100.0 33 ............................... GAGAACGTCGCGGCGGACCAAGTGGCGCTGGTG 360532 31 100.0 34 ............................... GTGCTCCAGATCCCGCGAGGGGCCGGCGTGGATG 360597 31 100.0 33 ............................... TCCGGTGTGGCCGGGGACATCGTCGCCACGGCA 360661 31 100.0 35 ............................... GGCTATCGGATGCAGGGCGTCCCCTCTGCCTACCT 360727 31 100.0 34 ............................... CTTGATGGGCGGGTGACGCTCTGGCTTGGCGACG 360792 31 100.0 35 ............................... CGGCATCGACGAACACCCAGCCGTCGCGCCCGGCA 360858 31 100.0 35 ............................... GGCCACGGGGTTATTCACGAGGCGCACATCGCAAG 360924 31 100.0 34 ............................... CCGACTGGGACAGTGCCAGCGGGACGTGGATCGC 360989 31 100.0 33 ............................... GTTTCAGCCATGGCGCCCTCACCCGCAGACGAG 361053 31 100.0 33 ............................... GCCACCATGGGGCGCGCGATGCTGCTGTTGCTG 361117 31 100.0 34 ............................... AAGAACGGGCGTGGCCATCTGTTCTTCGGGCCTG 361182 31 100.0 35 ............................... CGGCATAACTCAGGGCCTCTGCTCTATCAGCAAAT 361248 31 100.0 36 ............................... GTGAAGCGCCTGAACGCGGGCGACTACGGCGCGGTG 361315 31 100.0 34 ............................... GGAGCAGGGCCATGAGCATCACGGGCACATTGAA 361380 31 100.0 35 ............................... GCCTCGATCTTGCGGGCGCCGTGCTGGATCGTGGT 361446 31 100.0 34 ............................... GAGGTGCTCTCGGGCTCGATCATCGGCGGATAGC 361511 31 100.0 33 ............................... TACGGCGAGCCGGGGGTGGTCGAGGATTTGGCC 361575 31 100.0 33 ............................... CCGCACCGCGATGAGGGCTGCGGCCGGGTCGTG 361639 31 100.0 35 ............................... GTTTTCCCCGGCCCCGAACCTGTGACCCCCGCCAT 361705 31 100.0 34 ............................... GCGATCAGGGTCGCAATTTTATGGCGACGGGCGC 361770 31 100.0 33 ............................... GACGGAAACCGTAAATCAGCGGATGGCGCATTG 361834 31 100.0 35 ............................... TCCGACATCTGCGGCGGCCTTGCCGTCCTCGCCAG 361900 31 100.0 34 ............................... GCTTTGACCGAGGACCAGAAGACGACGGTGGCAG 361965 31 100.0 34 ............................... CATATGGAACTAACCCGTCTTGTGGACGGGGTGC 362030 31 100.0 35 ............................... ACATGAAGTGGATCGCGAAGGGGTACGGCGAAGTG 362096 31 100.0 34 ............................... AGCCTCACGGACGGCGCGACGGTCGGTCAGGCTC 362161 31 100.0 36 ............................... ACAGTCTGTTTTTGGGCGAGCATGAAGACGGCCTGC 362228 31 100.0 34 ............................... CTCACCAAGGACCCGGAGTGGCACGGCCCGGATG 362293 31 100.0 35 ............................... GCCAAGATCGTCGCCGTGGTCATCAAGGCGGCCTC 362359 31 100.0 34 ............................... ATGAGCACCGTCGTCCGGTACAACAACAATGGTG 362424 31 80.6 0 ............T...........G..CGCT | ========== ====== ====== ====== =============================== ===================================== ================== 66 31 99.7 34 GTCGCTCCCTCACGGGAGCGCGGATCGAAAC # Left flank : ATTCGACGCGCCCACGCCTGGGAGAAGGCCCGGCGCGTCGGTCAGGAGCTAGGCTTGCGACCGACCATCTTCCCGCCGGCATCCTTGCCCAGAACACTCCGCGGAGTGCGTTCGCGCCCCTGCCCCTCCGCAGGGTGGCTTCGCGCGGTGGTCCGCGCCGGCGCCAATTCTGCTAGGCTCCGTGACGACGTGGCGGCTCTGGTGTGTCCACCGGACCCGCGCGAGGCATGCGTCGCCACGCCCTTCGCCGTCTCGATATCGAAAGGCAGTGCGCATCTTTTGGCGAGCGGCTCGCTCCCCTCCAAGGAGGGCGTCCTGCCTCCGCGAACCTCAAGCTCACACGATTTCTCCGGCCGGTTCGCGCGCCGTGTAAAGCATTGCAAAAACATCTCTTTCGAGCCCCCCGGGCGAGACGCCCCCCGGCACCTCTGCCGCCATCACGGCAGGTTCGCGCGCCCGTGCTGATTTTGCATGGGCCGCCAAAATGCTATGGAGCGGGG # Right flank : TCTAGAACACCAGGGGGCCGTCCAGGTCCAGCGACGGCTTTGCCCCCACGTGTTCGACCCGCCGGCGCCCGTCGGCACCGAGACGGTAGAAGCGCAGGCTGTCTGCGGCGGGATCGATCTCGCTGACGAGGCGCGCGCGCAGGGCGGTCCACTGGGCCGGATCCACCTCGCATTCAAAGACCGAGTTCTGGACCCGCTGGCCGAAGTCGAGACAGGCGCGGGCCACGCGTCGCAACCGGCGGCGGCCGGCGCGATCCTCGGTGCTTACGTCATAGGTGACCAGCATCAGCATGGCAGCTCACTTCCAGATGAAGCCCGGATAGCCGTCGAGGTCGCCGCGCATGTGGCGGGCCAGAAGCTGCGCCTGCACATGCGCAAGAAGGCCGAAGGGCAGGTCCTCGCCGAGGAAGGGATGGCGCAGCGTATCGCGCTTGCGCTCCTGCCAGGCCACCAGCACCGCCCTGCGGGCATCATCGGCGAGGCGCACGCCGCCGGCTTCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTCACGGGAGCGCGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGGGCGCGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.10,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //