Array 1 17567-18554 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MZBJ01000010.1 Salmonella enterica subsp. enterica serovar Grumpensis strain 63-0359 NODE_10_length_121939_cov_4.26578, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
     17567	    29	 100.0	    32	.............................	ACGAGGGCGTCATCCTCAACAGTGCAGGCGAT 	
     17628	    29	 100.0	    32	.............................	TGAGTAATTATATACACACTAAATTCAGTGTC 	
     17689	    29	 100.0	    32	.............................	CGTCGCTTGCGTCCGGTCAGCGTGCGGGCGGT 	
     17750	    29	 100.0	    32	.............................	ATCGCGCCCTCATCTCCCCAGATTTTTGATAC 	
     17811	    29	 100.0	    32	.............................	TATCACTACCGGATCGGATCGGCTGAATTGAA 	
     17872	    29	 100.0	    32	.............................	AATATATAGTTATATATATGTTAAATAACCTA 	
     17933	    29	  96.6	    32	......T......................	CACATCTCCAAACTGGAACGCGCCAACGCTGC 	
     17994	    29	 100.0	    32	.............................	GAAAACTCTAAATCCAGCACGATTCGTTGTTT 	
     18055	    29	 100.0	    33	.............................	TTTCTGACTGACTGAGCCACCTCGACCACTGGC	
     18117	    29	 100.0	    32	.............................	CTATTAATGCAGATTCTAAAAGAATTGCAGAA 	
     18178	    29	  86.2	     4	...............C.....GA....G.	CTTG                             	AACTCCTT [18195] Deletion [18211]
     18219	    29	 100.0	    32	.............................	CGCGAAGCGGCGGCTGCGCTGGCGGACAGTAC 	
     18280	    29	 100.0	    32	.............................	CAGGAGGAATCAACTCTCGACCCTGCTGATCC 	
     18341	    29	 100.0	    32	.............................	GCTATTGTGATGCAGTCAATGCAATGGGGTAT 	
     18402	    29	 100.0	    32	.............................	GCCATACCCACAACCTCCAGACGCCCAAGCCC 	
     18463	    29	 100.0	    33	.............................	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAAA	
     18525	    29	  86.2	     0	TAA.........T................	|                                	A [18549]
==========	======	======	======	=============================	=================================	==================
        17	    29	  98.2	    30	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   GTGCTCGCTGCCGGTGAAATTGAACCGCCTCAGCCTGCGCCGGATATGCTGCCGCCAGCAATACCGGAACCTGAATCCTTGGGGGATAGCGGCCATCGGGGGCATGGTTGATGAGTATGGTGGTTGTGGTCACGGAAAACGTACCGCCGCGCCTGCGGGGTCGCCTTGCCGTCTGGTTACTGGAGATTCGGGCCGGTGTTTATGTTGGCGATACCTCGAAGCGTATTCGGGAGATGATTTGGCAACAAATCACGCAGCTTGGCGGTTGCGGGAATGCCGTCATGGCCTGGGCGACCAACACGGAATCAGGATTTGAGTTCCAGACATGGGGTGAAAACCGACGTATTCCGGTAGATTTGGATGGACTGCGTTTGGTTTCTTTTCTTCCTGTTGAAAATCAATAAGTTGAATGTTCTTTAATAATAAGGAATTGTTATCTTACCGTTGGTAGTTTGTTAGGTAGTAAAAAAGGGCTTTTAGAACAAATATATAGTTTTGGT
# Right flank :  GTTTCACCAGCATATCAGGACGTTTTTTCCGCCTTTGCCAGCTCTTTTACCAACGGCAGCATTATCCGCACTACATCGCGGCTACGGCGCTCAATTCGCCCAGGCAGCGCCTTGTCTATATGCTGTTGATTATCAAGCCGTACGTCGTGCCAGCTATTGCCGTTCGGGAAGGATGCATTTTTCACGCGTTGCTGGTATCCGTCTTTTTTACCCAGATTCCAGTTCGTCGCCTCAACAGAAAGCACCGATATTCCCGCTTTATCGAAAACTTCCGCATCATTACAGCAACCCGTTCCTTTGGGGTAGGATGGATTGCGTCCCGGATTGGTGTTGGCGGCGATACCATAACGGCGCGCAATCGCTAATGCCCGATCGCGGGTCAGCGTACGCACCGCTTCCGGCGTATTTTTCCCGCTATTAAAATAGAGTTTGTCGCCAACAATCAGGTTATCGAGATTAATGACCAGCAGTGTATTTTTCTTCTCAGCGTCACTCATTCG

# Questionable array : NO	 Score: 6.01
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-17] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//