Array 1 1815029-1816450 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP041657.1 Lacticaseibacillus paracasei strain CBA3611 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1815029 36 100.0 30 .................................... TGTTTTCTCCAGAACAACAGCTTAGACGGC 1815095 36 100.0 30 .................................... TGACATTGTGGGTATGCAACAAATCACCCC 1815161 36 100.0 30 .................................... GAAACTTGACAAAAACAATCTTATCTACTG 1815227 36 100.0 30 .................................... GAATATCATAATGCGGACGACCCATTACCA 1815293 36 100.0 30 .................................... AAAAGCCGGTGCAATATGCACCGGCTCACT 1815359 36 100.0 30 .................................... GCACTGATGAAACCGCACAACAGTTGACCG 1815425 36 100.0 30 .................................... GATCGCGGCACGATTGTAAACGAAGAAACC 1815491 36 100.0 30 .................................... CCAAATTGGTTAGCACCGCTTAAAGACGAA 1815557 36 100.0 30 .................................... TATCAGAGGCTTATCCATTAAACAACTGGC 1815623 36 100.0 30 .................................... AAACTGCCTTCCGTTGCGATCAACTCGCGC 1815689 36 100.0 30 .................................... AAGCGTTCGCTTGCGCTGGTGTTGGTCTCG 1815755 36 100.0 30 .................................... TCGTAGCGGCTAACACGCTTATGGCTGACA 1815821 36 100.0 30 .................................... AAAATATTTCTAGAATTAGCAACTTTATGG 1815887 36 100.0 30 .................................... GATCGTTGAAGAAAGGCTGATCAATATGTT 1815953 36 100.0 30 .................................... CGCAAAAAATGTTTTGACAAGAACACATCG 1816019 36 100.0 30 .................................... GGCCAATATCATCAGTCGGGAGATTGTCGC 1816085 36 100.0 30 .................................... ACTCGTCAATATCCTTCTGCATGATCAAGT 1816151 36 100.0 30 .................................... GCAATCGCGATACTTTCACCGATTGCAACA 1816217 36 100.0 30 .................................... AACAAAATAATAGGAGGTTTTTACCATGGA 1816283 36 100.0 30 .................................... ATGACTTTAACAATCAAATCCCAAGTTGTT 1816349 36 100.0 30 .................................... TATTATCCTAACACATCCATCGAGAAGTTA 1816415 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Left flank : AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTTAGTCATTATTTAAGTGCCAGAGACTTTTCGTCGGTGACTGAACAGATCGGTGATACTGAACTTCAAGTCGTTCTCATCGAATTCTCAAAGGTGAACAGAAAGAAGTACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGACAATCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACAG # Right flank : CTGAATATTCTAATGTTGTTGGATTGAAGTCAATATTTGAGACAGATTTTAAGAGACATTCAGAACCGCGTTTACCTTCCACAGCTCAAATAAATCATCAATTGCGATTAATAACTTATTTGAACCCTGGAAAGCATTAAGTCAGGCGGCCATTTGGCTCGTAAGTGTTGCAATTTCAACTTGTAAGGGGGTCTGGTAGCCCAGTGAACTATGAATTCTCTTCCTATTGTAGAAAGCATGCACATATTCAAAAAGGACGGCAGCGGCAGTTTCATAATCTTCAAAGACCGGCACTGGATAAACACATTCCTTTTTGAGGGAAGCGTGAAAGGATTCCATTGGCGCATTATCATACGGACAACCCTTACGGCTGTATGAGTGGCGGATATGTAGTTCAGTTAAACGTTGATTGTAATCATCGCTGGTATACTGTGATCCTAAATCCGTATGGATAATCAGGTCCCCAGTAATGGTTCGATTTTTAACCGCGCTTTCAAGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //