Array 1 41210-41703 **** Predicted by CRISPRDetect 2.4 *** >NZ_NUYR01000016.1 Bacillus cereus strain AFS076729 AFS076729_108_G12_Contig22_140523, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 41210 30 100.0 36 .............................. ATTGCCTTAACTGTAAAGCTATATTCTTCAGCTTCT 41276 30 100.0 36 .............................. ATAAGTACAACGTCAAACTCTGTATATTCCCTTCTA 41342 30 100.0 37 .............................. CAAATGGTGGCTACCCGTGAAGGGTTTGAAATATGGT 41409 30 96.7 37 .........A.................... TGCTCTAAGACTACTGCATTCCCATACCCTCCAAATC 41476 30 93.3 36 ...A.....A.................... ATTTTATCTTCTAATGGTTTTCGTGGTCTTGGCATT 41542 30 93.3 36 .........A......A............. AAAGAAAAGGCAATGTGTGGTGCAACGAGTGTAAAA 41608 30 90.0 36 ......T..A......A............. TACAAATCTTATCATAACGTATGATTTAAAGAATTT 41674 30 76.7 0 A.....T.GA......A......A.....A | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 93.8 36 GTTGAACAATAACATATGATGTATTTAAAC # Left flank : AAAAGTATATAATCCTTCTTAAACTAGTAGCTGAATGGATAATCCAAAGGTACATCCCTTAATGGGGATGTGCCTTTTTTCGTAGAAAGGGGAATTATTAATGGATAAAAAGAAAAAACAACGTGTTAGACGTGTAATTATTATAGGGATTGTCGCAATGATTTTATTGATATACAGTGGGAACGAATTTCAGGAGAAGAATGGAAGAATCTATGCTCCTGCAAAGTATTTCGAGACGGGAACAAAATTAGTTTCATTTTAATCTTTTTCATATTTTCATCGAACAATATGGGGTAATACGGAAGTTGCCGAACGTTTTACCAGATTATTTACCAACCTAATTAATTGGTGATAACATGTAAATGTAGATAAAGTAAGGAAATTCTGCATAAATTATAAGTGAATGAGATTTATATCAATTAGCTGGTAAAAAACTTATAAACCCACGTTTCTATAGTATAATAGTGGATACAGGAAATAAAGAGCCAGTATTATTCGGT # Right flank : AGCTAAAAAATGTTATTGGTTTAGGAAGTAATATGGTTAAATAATAAAGTAGAAAGTATTATAATTTCGAAATAAAAAGCACACTCTTGATTTGAACTGCCCCCTATAAAATAGGCAGTTTAATAAGAGTTGTGCTTTTTTATTTAAAACGGAAATATAAGGTGGGGAGGATAGAGTGCTGAATGAGCTCAGTATAATTTAATTGTTTACATTTTTGTAAAATAAATAAATCGTATTATTTATTATAATATGATATCCTATTTTTAGGAGGTGTGAAAATTTGAATTTTGAGTTAATAGTTACAACTTTATTGAAAGAAGATCTTCATTATGAGGATAGTTTGCAATTAATTGGTAGTTTCATAAACAAAGTGATGCTTCAAAGTGAAAAATTAAAAGCCTTGCATGAAAGAAAAGGTTATAAAAATTATGTTTTTAGCAATTTTTATCCATTTGAAAAAGATAAAATATACAAAAGTGGCCGAGTGTATGTATTTCGAT # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATATGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 50880-51106 **** Predicted by CRISPRDetect 2.4 *** >NZ_NUYR01000016.1 Bacillus cereus strain AFS076729 AFS076729_108_G12_Contig22_140523, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 50880 30 100.0 36 .............................. GTCATAACGTCACAACACCTCCTAGTGAGAGTATTC 50946 30 100.0 35 .............................. TATACCTGATACGATGTAGTTTTATCACCGTATGT 51011 30 100.0 36 .............................. AGATTTAGAGAAGAAAGAAGTTAAAGATAATACAGC 51077 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 99.2 36 GTTGAACAGAAACATAAGATGTATTTAAAC # Left flank : AAATTCTTTTATTCCATTTAATCTAAAGGAGAAAAAATAATGAAAAATCAAATGAATGCTAATTATGCGTTTGTTTTTTATGATGTAAATGAGAAACGAGTGACGAAAGTTTTTAAAATCTGTAAAAAATATTTAAATCATTATCAAAAATCTACTTTTAGGGGGGGGATTACTCCCTCAAATTTATTAAAAATGGAAAAGGAAATTAGGAATATTATAAATGAGGGGGAAGACTTAGTTACTATTATCAAAATGCTAAATGAATATAGCTTTGATGAGATTGAAATAGGGTATAGAAATAATAGCGATCTCCTATTTTTGTGAATTTACCAAGTGAAATGATAGTGGGAATCTAATAAACTTTGTTAATTCAAGACTTATACTATTTCTTTTTGAGAATTTTATTTTTTTTATGAACTGCTGGTAAAAAAATCACTAAACTCATATGCAGTATAGTATTATATAAAATATGAAGGTAATAAAAAGTTGATTTAATCGGT # Right flank : ATTTTGGTCTATTGATTTTACCGTAAGTACGTAACTTGTTGAACAAAATTCTTAAATTAGAATTGATTTCGAGTAACTCAATAGATAAGCTAAAGGAAAATTTTTAAAGAGAGAAGTTTTTTCATAGAAAGGGGAATTAAGAGTAGGAAAATCTATGCTCCTGCAAAGTATTTTGAGACAGGAACAAAATTGATTTCGTTTTGATAATAATTTGGTCTCTTTTACCAACTATAGTGAACAAATCTGCATGACATGTACTATAGTTGATGTTATAATATGTGTAGAAGTATTATAACAATAGTTTTTGCATAAACTAAAGAAGACGAAGTGCTGGTAACACTTCGCCTTATGTAACAGCTACCGCAAGGTGGTTGGTTACTAAAAATTTAGTTATTTTTTATTGAACCACCAAGTACGTTTGCGGCGTTGGGTGGTTCTTTTCGTTTTTCGTCGCTTTTTTTGTCTTTTTTTTCAAAACGTTGATAGGTATTTCCCTATAT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGAAACATAAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //