Array 1 133830-131602 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMGY01000002.1 Aerococcus urinae strain UMB0553 NODE_2_length_460162_cov_60.3894, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 133829 32 100.0 34 ................................ AATCATGACAGTACTCTGGCTAGATAACCAAAAT 133763 32 100.0 34 ................................ TTCTGCTGACTTCCCGGCTACTTTAGCAAAGCCT 133697 32 100.0 34 ................................ TCGTTGTTGTCAAACCATTGCTTCAAGGTCTTCC 133631 32 100.0 35 ................................ TTTTGACACGATTAACTGGGCTGGTTGGCTACCAA 133564 32 100.0 36 ................................ TATATATAACATTTATGAAAAGCTTTCAAAGCCTCG 133496 32 100.0 34 ................................ GTCTGAATTGTACGCTCCTTTAGAGTAGGGGAGA 133430 32 100.0 34 ................................ CAGCCTTGGACGTGACATCTACAATTAGGATGTT 133364 32 100.0 36 ................................ AAGTAATGGCAGGAGTGACTTTGTGAAATGCAGTTA 133296 32 100.0 34 ................................ TTCATTCATTAAAGCATATGAATCAGAACTAACT 133230 32 100.0 35 ................................ AAAAATTGATCATGAGGGTTAGCTAAGTCAAGATC 133163 32 100.0 33 ................................ TCCATATTTTAAGATCTTATTTATTACAAATTC 133098 32 100.0 33 ................................ ACTAGCAATCTGCTTAACAACATCTCTTGTCTT 133033 32 100.0 35 ................................ TAATGAGTCTAAGCCTCTTTACATATTAGGGTCCA 132966 32 100.0 35 ................................ AGTCATTACTAGATCAAATGGCGGACTTGTATGAC 132899 32 100.0 34 ................................ GTTTAGGCCAGCGATATAGCTCTCCCGGCGCTCC 132833 32 96.9 36 ..........T..................... CAATGATATTGGTAGATTTCCTGCTCAAAACGAGGG 132765 32 96.9 34 ..........T..................... CTTGTGTTGCATAACCAGCTTTGATAAAAGCTTG 132699 32 93.8 35 ..........T................G.... CAGTGCTTAGCGTGACGGCTCTCTACCCAAGAGAG 132632 32 87.5 34 ..........TT...........A...G.... GATTGGTGATAGGTTTCTCATGATTTGGCCTCCT 132566 32 87.5 35 ..........T.AT.............G.... AATCTACTGGTGGAAGATAAGGAGGAGAAACTGAA 132499 32 87.5 35 ..........TT......T........G.... ATCATCAAAGCCACCCCCATTTTTGGATTTAATTC 132432 32 84.4 34 ...A......T.A....A.........G.... CAAACAGGCGAAAAGATTGCAGATCGGGTAAAAG 132366 32 96.9 34 ...........................G.... CCATAAAAGTCATCGTCTATAATCTGGTCTAGCT 132300 32 93.8 35 ..........T................G.... AGATGAAAGTGCAAGCGAAAGAGAAGACTAACATA 132233 32 87.5 35 ..........T.A...T..........G.... TACGCCTACAACTTTGCAGGAAATAAAGGCGCTTC 132166 32 90.6 35 ..........T........T.......G.... TTTAAGCCAGTCAGCATCAATGCCAAAGGTAAAAT 132099 32 84.4 35 ........T.T.AT.............G.... CGCCAAAAGTGGAGCCAGCCATCAAATTCAACCGG 132032 32 93.8 33 .G.........................G.... GTACATTCTATGTGAGGCATCGATCTATGTGAG 131967 32 90.6 34 ..........TT...............A.... AATTGACGGACGATCGCTGTTGACACCATGAGCT 131901 32 90.6 35 ..........T.A..............G.... AGTTTTTACAGCTAAATCATTAAAAATATTAGCAA 131834 32 81.2 34 ..........T.AT..T..T.......G.... ACCCTCTCCATATCTTGAAAATGTTCATAATTGC 131768 32 84.4 34 ..........T.AG.......A.....G.... TTATATATATAGCAAATATCGTATAAATCACGCA 131702 32 87.5 37 ..........T.A..........T...G.... AATCGCAAATGATAGCCATGGTCATGGTTGTTCAAAC 131633 32 81.2 0 ..........T.ATT....T.......G.... | ========== ====== ====== ====== ================================ ===================================== ================== 34 32 94.0 35 GTCGCAGGCTACGCGCCTGCGTGGATTTAAAT # Left flank : AGCTACTTGCACGGTATATTCGAGGAGACATTGATTACTATCCGGCATTTATTAGTTAAGGGTGATTTGAGATGATGGTTTTAATTACTTATGACGTGAATACTGAAAGTAAGGCTGGTCAGAAACGTTTACGTAAGGTGGCTAAAGTTTGTGTTGATTATGGTCAACGGGTTCAAAATTCGGTTTTTGAATGTAGTTTAGATCCTGGGCAATTCGCACTCGTTAAATCGAAATTAGATGATATCATAGATAACGAGATCGATTCGATCCGCTTCTATAATCTAGGTAAGCATTGGGATCATCGAGTTCAAACTTTAGGACGGGACGATACTTATCACCCTGAAAAGGATGTCTTACTCCTATAACGAACCTCAAGCACACAGATTTATAGTGAAGGCTTCGGATGAAAAATGGCTTTAAAAATATAGTATAAGTGATTATTTTGCTCTTTTTGTTCCACTTATATTATGAAAATATGATGAAAACTTGTAAAAAGAGCT # Right flank : TAACATGCGGCTAAGTGGTTCAAATCAGGTATAAAGTTGCAGGCTTTATTTCAACGAAGCTTGGTTATTTACGTAAAAAAATCAGCCCTTGTCAGCTCCCCCACTAAAGAGCCCAACAAGGGCTTTTCTTCTGTAATAACATAACCAAAACACTAAGAATATTTAACAAAACCTAAAAATAAATTACAACACCACTGAAACCGATCACTTTTGATCTCTTTTCCTAAGTTGACAGGGACAAATAGACAGGCTAAACTATCAGTAAATCAAAACATTATTAAGGAGATTACATCATGACTTTAGTATTCATTTCTTGGCAAGGCTGGCGTAGAGTAAAGTGAGATAACTAAGAACGGTTAGACTCGCTTTATTTTGGTTACCCCAATTGAAGAGAAGTCTATGCCGGATGTAATCGAAGAGAATGAAGCCGCATAGATGGCGGTTATGTTGAACTGTGATTTTTTACACTAGTTTACATAACCTTTCTATGCGGCTTTTTT # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.64, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGGCTACGCGCCTGCGTGGATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.50,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [43-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //