Array 1 51-746 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIBB01000055.1 Lactobacillus johnsonii strain UMNLJ54 johnsonii07B3S14158_Average_coverage:_150.07, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 51 36 97.2 30 ....................T............... AAAATGCCTTCCTGCATAGAAAATTATATA 117 36 100.0 30 .................................... CTATATTTGCTCCTTTTCAACTGTCTTTTT 183 36 100.0 30 .................................... TCCCCATTTTCTTCAATTTCCTTATAATAT 249 36 100.0 30 .................................... TAAGATGGGCAACTGGTACGACATTTAAAT 315 36 100.0 30 .................................... TTGAAGATAGTTCCAAAGGGCTTCCAATCA 381 36 100.0 30 .................................... AAGTCAAGCTTTGGAAACTATTAATGCTAG 447 36 100.0 30 .................................... TGCCTTCGCGGCGAGCGACCTTGCTTTATG 513 36 97.2 30 ..................................C. AATCAAATTGGATTGTTGTATAATTCCCTT 579 36 97.2 30 ..................................C. AAGATGCAGATCACTTGCAAACGCTTGGTA 645 36 97.2 30 ..................................C. CTTGTATACGGCCACATCTAAATCTTCTTT 711 36 83.3 0 .......................A..A..A.AA..A | ========== ====== ====== ====== ==================================== ============================== ================== 11 36 97.5 30 GTTTTAAATGTATGTCATATCAATTAGGTTATGAAC # Left flank : ATATTAATTAGGTTATGAACCCGAAATCATTTCAGTAAATCCATTTATCAG # Right flank : AGCTATTCTAAGGACAGCTTTTTTATTTTTTAAAAATAAATAACAAATGTGTGAATATTAAGAGAAACATAACACTAAGTAAAAAGTTATACTATCAGCTTTGCGCCTAATTTGCGACATTTTATAAATAACTAGTAATTATCTGTTATAGTCTTTTTGTATGGTGGAGAGCACCTTAGATCGAGACGATGCAAAAGTATGGGTGATTGCTAGATGAATAGAGCTAATAAAGGAAGATGTAGATATATAGAAACGGGATTAATGACAGTCAATGATGTTATTGAAGAGGTTTATTTAGCATGGCTAAACGATGGATCTCATTGGGTTAATAAAGACAAAACCGGTATATTCTGTAATGCGGCAAATCCGGAAGAGGAGAAACTAGCAGATGAGATAGCCCAAAAAGCAATGAAGGGTTTTAATTTTCGTGGCAATGTTGTATGTCGCAGAAAATATAATCCTAGACACTTATTGGCTCTTAAAAGAGTTGTTATCTCTTC # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAAATGTATGTCATATCAATTAGGTTATGAAC # Alternate repeat : GTTTTAAATGTATGTCATATCAATTAGGTTATGACC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //