Array 1 354507-355798 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR215044.1 Mycoplasmopsis arginini strain NCTC10129 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 354507 36 100.0 30 .................................... TCAATTTCAGACAAATAATATGCTGGATCT 354573 36 100.0 30 .................................... AATAATTAAAAGGTTTATAAAAGGCAAGCG 354639 36 100.0 30 .................................... ATTAAAGAAAATAAAGAAGGAGAATAGAAT 354705 36 100.0 30 .................................... TTTTTTATCATCATTTTTTTTACCTAATTT 354771 36 100.0 30 .................................... ACCGTAAAGGGAGAATCACCGTCAGTATTG 354837 36 100.0 30 .................................... AATAAATCACTCATCAGGATTATTATAACC 354903 36 100.0 30 .................................... TATTTAAATAATTCCCATTAATATAGTCAT 354969 36 100.0 30 .................................... GATTCCCTTGCTGAACCTAATAAATAATCC 355035 36 100.0 30 .................................... GAATAATAAAAGTACCATCTCAATTTATGT 355101 36 100.0 31 .................................... AAGGAAAATGAGTTGGCGCCTTTAAATGAAT 355168 36 100.0 30 .................................... TTCAATACGTGTGGATATTGTGATCATTGT 355234 36 100.0 30 .................................... GATATTTATTGAAGATTGTTTGGATAAACT 355300 36 100.0 30 .................................... TTTTTAAAGCTTCATAACTTTCCTGATTAT 355366 36 100.0 30 .................................... TAAAGAATTAAAAGAGGTTATTGAATGGTA 355432 36 100.0 30 .................................... AAATGTCTTACAATTTGCTTTTGCTGAGCC 355498 36 100.0 30 .................................... ATAATACATCGGTGTAGTCGAAATAGTAGT 355564 36 100.0 30 .................................... AAAAAAATTAGGTAGTTACGAACAAGACGT 355630 36 100.0 29 .................................... GAACTTATTCTCTATTAGTTCAGCGTAAG 355695 36 100.0 31 .................................... TATATTCTATTAGAATTGCGAACATTACTAA 355762 36 94.4 0 .............................T.....A | A [355790] ========== ====== ====== ====== ==================================== =============================== ================== 20 36 99.7 30 ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC # Left flank : TTAGATCAAGAAAAAGTAGATACAATTATCGAACAAATTAATTTAAAAATTGGTTTTGAATATTTATTTAAAGATATAGATAACAATAAATTAATAAAATCAATATTTACTATTAACGAAAAACTTTTAATTAGTAAAAATAATTTATTAAATATATTAGATATTTTGAGCTCATCAAATTTTAAACCATTAATTATAGTAAAAGACTTAACATATATTAATATCGAAGAACTTATTAAATATAGTAATTTAAATTTTTTAATTTTAACTTCTGATTTTACAAAATATATTCAAAGTTATAATCAGTTAGAACTAGTAAGCTTTTATAATGGAGAAATTCTTTTTGATATTAAAAGTTGTACTCCAGTAATTAATTTTTTTGAAAATATTAAAAATAAAGAAATAAAAGAAAATGAAAATTTTTTCTTAAATAAAGAGGAGGAAAAACAGTTTAAATTTAACTTTTTTGACATAAAAAAGAGTTTTTTTGAATAAATGAC # Right flank : ATTAAAAATATGACACCAGTTTACTTTCGTAAGCCGGAACTATAATGAACCCCAAAAGTTTTTCCAAATTACTTGGTCCAACTTTTGGGGTTCATTATATTTTGACTCTTTTTTTATTGACGTTCTTATTTTTTACACATCCTTTTTATAATTCCTTGATATAATAAATCAGCATTTAAATATATTAAAAAAAATAAGAAGGAGAATAAATTTTATGTTTTTTAAAATAAATAAAAAACGCGGAGAATCAAGCTTTTTTGCAATAAAAAAATTTGCAAAACTAAATAACATAAAAAAAATTGGGCACAGTGGAACATTAGATCCATTAGCTGATGGACTTTTAATTGTAGCTACAGATGAAGATACAAAAACTCTTTCTTATTTAGTAAATGATACTAAAGAATATTATGTAAAAGCTACCTTGCATTGCACTTCGAGGAGTTATGATGAAGGTGAAGAGGTTATTTATTTAGATAATAAAACTAAAGTTACCAAAGAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //