Array 1 501423-503341 **** Predicted by CRISPRDetect 2.4 *** >NZ_MNPO01000001.1 Lactobacillus acidophilus strain KLDS 1.0901 KLDS1.0901.Scaf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 501423 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 501484 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 501545 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 501606 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 501667 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 501728 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 501789 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 501850 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 501911 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 501972 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 502033 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 502094 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 502155 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 502216 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 502277 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 502338 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 502400 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 502461 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 502522 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 502583 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 502644 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 502705 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 502766 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 502827 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 502888 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 502949 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 503010 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 503071 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 503132 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 503193 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 503254 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 503315 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 32 27 98.8 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : CTGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //