Array 1 3807-206 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIML01000074.1 Limosilactobacillus reuteri strain KLR2004 NODE_3_length_76010_cov_2.40908_ID_8504, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 3806 36 100.0 30 .................................... CCGAACTTAAATCGACAAGTGACTCGATGG 3740 36 100.0 30 .................................... AGTAATGAGTCTTGAAAATACGTAGAGTAG 3674 36 100.0 30 .................................... CGTCAAGGTTAGAGTCTGTGTATACATCGG 3608 36 100.0 30 .................................... ATGATCAATTATGTTATAGGTACTCCTAGT 3542 36 100.0 30 .................................... CCATATAAAGTTGATGAGGATAGGAACCTG 3476 36 100.0 30 .................................... TGGTATTCTATGGATCTCTGGGGTTATTGC 3410 36 100.0 30 .................................... TCGAAAGAACATTAAACGTGCTTTTTGGTT 3344 36 100.0 30 .................................... CAAACCGCACGAGAATTAGCAGCACGTCTT 3278 36 100.0 31 .................................... TTGCGGCTGTTCTCTAGTGACTGCTCCATAT 3211 36 100.0 30 .................................... CATTTTTGTGTCTCCTTATCTAAGTAATCA 3145 36 100.0 30 .................................... CCGTTTATGTATCGGGACGAAGAGTCAATT 3079 36 100.0 30 .................................... TTAACGTTCTTTAGCTTACCTGACTTAGTT 3013 36 100.0 30 .................................... CTGCTGTTGCTGACGGTTTTGTTGCCGCCA 2947 36 100.0 30 .................................... TAAACAATATGATACTTTCCGTTTGTATCT 2881 36 100.0 30 .................................... GATCACGTTCTAAAATAATTTCAATGTTCA 2815 36 100.0 30 .................................... TCGGTAGACAAGAATGTATTGTCATCAATT 2749 36 100.0 30 .................................... AGTTTGCGAAACCTGCAAGCAATAATGAAG 2683 36 100.0 30 .................................... ACTATTTACGAAACAAACAAAGCGAACGTT 2617 36 100.0 30 .................................... TCAACTTGTTGCTTGTTTCTATCACTCGTG 2551 36 100.0 30 .................................... TATTTTCTTTTATTTATCGCAAGTATCAAA 2485 36 100.0 30 .................................... TCCTCGTTATAGACTAACTGAACGTTATGG 2419 36 100.0 30 .................................... CCCCTACAACAGGCATATTAAAACAGTAAT 2353 36 100.0 30 .................................... GAGATGAAGATGGAAAATTACATCAAAAGA 2287 36 100.0 30 .................................... AGTTGTATCATTTATTATCACCCTTTTTTA 2221 36 100.0 30 .................................... AAAGGCTTGCTCGGGCACGTTATTTGAAAA 2155 36 100.0 30 .................................... AGTAGTTACAACGTGATCAGTTTCATATTC 2089 36 100.0 30 .................................... GCTTTTACTGTGTAACCAATAATTTAGCTG 2023 36 100.0 30 .................................... TCGCCTTGAGGTCCTCTTGCAGATTTCCTA 1957 36 100.0 30 .................................... GCTCTCTTTACGAATGGATAACCCAGAACT 1891 36 100.0 30 .................................... ATTTAATTAATTTATTTTTATGAAACAAAG 1825 36 100.0 30 .................................... TGTCAATCGCTTGGCTTAGTCCTTCGTGAC 1759 36 100.0 30 .................................... TCAAACTGTATAATATAATTAGTGATTAAA 1693 36 100.0 30 .................................... GTGATTATATGATGGATAAGACAGTTGTGC 1627 36 100.0 30 .................................... AAAATTAAACAAGAACATTATTTATCAAGT 1561 36 100.0 30 .................................... TTGGGGGGTAAAACATGGCTAAATTATTTA 1495 36 100.0 30 .................................... ATGGAAACATTGGTTGCGGTTTTGACGCTA 1429 36 100.0 30 .................................... TTATTGATGGAGTTCGTGAAACACTTAATG 1363 36 100.0 30 .................................... TTGTCTGGCTGGGTATCAGATCCTCGTACG 1297 36 100.0 30 .................................... CAGAACTCTTTTGTAACAACCGGACTACTC 1231 36 100.0 30 .................................... AAGCAATTCCGGCGGCAAAGGTTGGTGATG 1165 36 100.0 30 .................................... TTAATTTCGCCAGTTTCAGCATTGATATTT 1099 36 100.0 30 .................................... ACTCCGTAACGCACATGATTGAGCAGAAAG 1033 36 100.0 30 .................................... GAGAAGTACCAGCGAGAAAGGACAGAACAG 967 36 100.0 30 .................................... GACAACTTGAAACGGCAAGCCAAGATAGCC 901 36 100.0 30 .................................... TCTACCTGCTGTTGAAATTGAAAAGCAATT 835 36 100.0 30 .................................... AAACAGTGGCTTAGCCTTGATTGAATCATC 769 36 100.0 30 .................................... TTGATTAATTTTCATCGTCGTCATCACCTG 703 36 100.0 30 .................................... GAAATGGATTTCAGACCCGGTCAAAAGCCT 637 36 100.0 30 .................................... AACTTTGAGGACGACAACGAAAAAGCGGGA 571 36 100.0 30 .................................... CCTGTACATAGAGTAACGGCCAGACACCGG 505 36 100.0 30 .................................... GCACAGTTTGTTGTGGTACCGTCTTCGCAA 439 36 100.0 30 .................................... TTAGTTAAGTCGCTAGGCACTCGCTTAGTC 373 36 100.0 30 .................................... AGAGTTGGGACGCTTGGGCTAAGGCGGTTG 307 36 100.0 30 .................................... CTTTGACCAGTTACATATAGCGCATTAACG 241 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== =============================== ================== 55 36 99.8 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGATATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGAATTTTTATTATATTGACAGGGATTTCGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TAAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAATTAGTGTATAATATTTACTAACCTAAATTTCAAGAATAAGTTAGCCACTGGACTCAAATAAATAATACTGACCAATTGATTATTGGTTGATGGAGCTGTGATATCTCTTGGT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //