Array 1 8238-6460 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHCMY010000014.1 Litoribacter alkaliphilus strain KCTC 32217 Scaffold14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 8237 46 100.0 29 .............................................. AGTTTTTTGGTGTTTCCTGTGGTTTCGGC 8162 46 100.0 30 .............................................. CATTGGCTTTTATAAATACCAAATTTATTC 8086 46 100.0 30 .............................................. TTGTGCAAAAGTTTGGTGCCCTCATACGGA 8010 46 100.0 30 .............................................. TGCTGGCCACTATTGCTATCAGCATCTTCA 7934 46 100.0 30 .............................................. TTACCTTGTCTGACCCTAGTAATATATAAT 7858 46 100.0 30 .............................................. GGGGGAGGTGGCAAAAGCTCCTCATCATCC 7782 46 100.0 29 .............................................. GTTAAGCTGTAGCTGTAGTTTTGTTAGAT 7707 46 100.0 29 .............................................. ACCAAAATAATTGCGGTTTTGGGCGTCCT 7632 46 97.8 29 ................................C............. ACCAAAATAATTGCGGTTTTGGGCGTCCT 7557 46 97.8 29 ................................C............. ACCAAAATAATTGCGGTTTTGGGCGTCCT 7482 46 100.0 29 .............................................. ACCAAAATAATTGCGGTTTTGGGAGTCCT 7407 46 100.0 29 .............................................. AAAGCCCGTTAACGTTTGGTTTGCCGTTT 7332 46 100.0 29 .............................................. TGGTTTGGGATGGTTTTGTTGAGATTGAC 7257 46 100.0 29 .............................................. AAAGCCCGTTAACGTTTAGTTTGCCGTTT 7182 46 97.8 29 A............................................. AAAGCCCGTTAACGTTTAGTTTGCCGTTT 7107 46 97.8 29 A............................................. AAAGCCCGTTAACGTTTAGTTTGCCGTTT 7032 46 97.8 30 A............................................. TAAGTATGTCAATGGGTTCGGAAGCGTTAG 6956 46 100.0 30 .............................................. AAGGAAAGCAATTAACTTTATTCTGAAATG 6880 46 100.0 29 .............................................. TTGGTCTTCGTAGGCTTGATAGTCGCTGG 6805 46 100.0 30 .............................................. TTCGGCCCCCTTGTCAAAAACGACGGTTAA 6729 46 100.0 29 .............................................. TTGGTCTTCGTAGGCTTGATAGTCGCTGG 6654 46 97.8 29 ..G........................................... TTGGTCTTCGTAGGCTTGATAGTCGCTGG 6579 46 97.8 29 ..G........................................... GTGACCAGCTATGCGGCTGTGGCGAAGAG 6504 45 89.1 0 .........T-..............C.........T....T..... | ========== ====== ====== ====== ============================================== ============================== ================== 24 46 98.9 29 GCTGTGATTCCTATCCTAAGATAGCTGGTTGAAAGCAATTCACAAC # Left flank : TATTTAGGAATAAGTAGAAAGATTATATATCCGGAGTATGGATGAAAAATATTTTTCAAGGTTAAACCAATATAGAAGTTTGTGGGTACTAGTATTTTTTGATTTACCAACGGAAACAAAGAAAGACAGAAAGATTGCATCTGGCTTTAGGAAAAAGTTGCTGGACGATGGTTTTTCCATGTTCCAATTTTCCATATACATGCGCTTTTGTGCCAGTCGAGAAAATGCCGATGTCCATATCAAAAGAGTTAAGAAGAACCTGCCACCCAAGGGCAAAGTGGGAGTTATGTCTATTACGGATAGGCAGTTTGGTATGATGGAAATATTTCAGGGGACAAAATCAGTGGAAACAGAAGCTCCTCACCAGCAGTTAGAGCTTTTTTAATTCTCGATTAAGAAAAATGACTTATATTTAGCTGACATTCAAAAGAATACAATTGTTTTTTTTATTCTAAAAAGCAGTGTAAAAAACAGCATACCAGCCACTTACGTGGAGGTAT # Right flank : CAAGTATAGGTTTTGCTTTTCTTCTTTTCAGCTGTAATTCCTATTGAATGGGAGTGATCAGTCATTCAGCTGCATAGGCAATTCTTTTGAACAGGAATTCTGACCTAGTCAATTGAAAGGTGAAGGATCTTTTTCTACCAGAATGACACAATTATTTAATATCTTTCTTACATGAAAAGAGGCATTACCCCCCAACAGCCAATTAAGTTGAAGATTTCCTTAGAAGGACTGCCCTTTCGGGTGACCCGAAAAGTTCTGGTTCCACATAATACCAACCTGATACAATTGCACGTCGTTTTGCAATATGCTATGGGCTGGATGGGTGGCCACCTGTTCCAGTTTCGTGACCGGCGAACCTACCCGGGAGTCATCGCGTCCTATGCCGACGACCCTGAGTTTTTCATAGATGAAGTGGAGGAAACGCCTGCCCATCGAGTGAAACTGCACAGCCTTTACAATTTCCGGCAGGGCTTGCCTTTTTGGTACTGGTATGATTTTGG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTGATTCCTATCCTAAGATAGCTGGTTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.70%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.00,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //