Array 1 118680-125604 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKAT01000020.1 Chitinophaga terrae Kim and Jung 2007 strain NBRC 109751 sequence020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 118680 29 100.0 36 ............................. GATTATCAACCGGCATGTTCGCAGCAGCTAAGCGAT G [118695] 118746 29 100.0 37 ............................. TTATTATCATTCGCGGCAATCGTATCAAACCTATAAA G [118761] 118813 29 100.0 36 ............................. ATTTTACCCGTTTTAGCCCTACTGTCGCTAATTTGA G [118828] 118879 29 100.0 36 ............................. ATCTCAACAACGCGCCGGCTCGGCAGCAAAGAAAGC G [118894] 118945 29 100.0 35 ............................. TGTAGTCAAATGTTGCAGCAATTACAGCTATAATA G [118960] 119010 29 100.0 36 ............................. CTTTAGGCGCGGCGCTTGGCGCTGTTGCTTTGGCAA G [119025] 119076 29 100.0 36 ............................. ATCATTGTATGATCATACCAGAAAACAGTTACTGGG G [119091] 119142 29 100.0 37 ............................. GATCTAAGTAGTTGCCAGGCGTCGCCCATGATACCAG G [119157] 119209 29 100.0 37 ............................. ACTACCATTTCACTCGCTAGGACTGGCACAAGAAATA G [119224] 119276 29 100.0 36 ............................. TATTAAAATCATCAGATGCATTTATTTTGCCCGCCG G [119291] 119342 29 100.0 35 ............................. TAGAAGTCCTGAAAGATTATGGCATTGTCGCGGTC G [119357] 119407 29 100.0 36 ............................. ATCTTTTTCAGGAGATAGAGCTTTAGATTCTGATAC G [119422] 119473 29 100.0 36 ............................. TTTGAATTTTTTTACTAACGATAATATACACAGCAG G [119488] 119539 29 100.0 36 ............................. TAATATGGCAGTAGGAAAAGTCGAAAAAATCTACCA G [119554] 119605 29 100.0 35 ............................. CTCTCCCGATTTCGATGCTGTGAGCGTCGATGAAG G [119620] 119670 29 100.0 36 ............................. TGGATGCCCTGGAACTAAAGCTCTCTGTTGATAGTA G [119685] 119736 29 100.0 37 ............................. AACTCAAAAATGGGTGTAGTCACCTTTGCTTCAGGCG G [119751] 119803 29 100.0 35 ............................. GGGTAAGGTGCAGGAAGAGGACTATCTCCGTGCGG G [119818] 119868 29 100.0 36 ............................. GACAATAGGATGATAGGGCTGCTTTCGGGCGCTGTT G [119883] 119934 29 100.0 35 ............................. ACGAGGAATTGCAAGCGGTTCATATTAAGACGGTA G [119949] 119999 29 100.0 36 ............................. TGACTATTGTTGAATTTGATGTAGCAGAGGTATAGT G [120014] 120065 29 100.0 35 ............................. GAATTCACCATTGCGGAGATTATGGGATGATCATC G [120080] 120130 29 100.0 35 ............................. AGGTTCTTAAGTGTGGTTATGCGAGCACGTATTGA G [120145] 120195 29 100.0 36 ............................. AAATATTTGGGCGATGATGAAATACAACACTGCTGC G [120210] 120261 29 100.0 36 ............................. GATGCCTCACACGAAGGATTATGAGGTGAATAATAT G [120276] 120327 29 100.0 35 ............................. TAAATTAGGTTTGACCTATAATGATTCTATTATTG G [120342] 120392 29 100.0 35 ............................. TTTGATATCCCAAAATATGTGAGAGCATTTGAGAG G [120407] 120457 29 100.0 36 ............................. CTGCTTTGAGCAGCAGCATTGAGGGTGAGTAAACAA G [120472] 120523 29 100.0 35 ............................. TGAGGATGTATGTGGCAGCAGATGCAATAATTCCA G [120538] 120588 29 100.0 35 ............................. TTGTAGCTAATAGGAAATCTCTTTCTTATACTCAC G [120603] 120653 29 100.0 36 ............................. TATAAGCCCCGCATATGGCGGCAAATCTTGTATATT G [120668] 120719 29 100.0 36 ............................. CAGTCTCTTCCAAGGCTTCCAACATCAGGTTATGCA G [120734] 120785 29 100.0 36 ............................. GATTTATCCCCTGCTCCAAACAGTTGGGGGCTGGAC G [120800] 120851 29 100.0 35 ............................. TATCTTTTTTGTTTTGTTGAAACAAAGATAAGCAA G [120866] 120916 29 100.0 37 ............................. CGAAACTTACCGGCTTTCACAGCGGTTATTAATTCGT G [120931] 120983 29 100.0 36 ............................. CTATCATGAAGGTTGGCGCGGGTATAGGTTTAGCCT G [120998] 121049 29 100.0 36 ............................. AATAAAACTATGAAATAAACTGAATATTTCATGAGC G [121064] 121115 29 100.0 36 ............................. TTATTAACAGATGTAATATTTGCAATCCCCCAGCTT G [121130] 121181 29 100.0 36 ............................. GACGTTAGTAACAATTAACATAGAAAACGAATATCT G [121196] 121247 29 100.0 35 ............................. TTGAGTTGTTATTGTTTTTGTAGTTGCGCCATCTA G [121262] 121312 29 100.0 35 ............................. GGTGAGCATACCGAAAGGCGTATTTAAAGGGCAAA G [121327] 121377 29 100.0 36 ............................. GTTAATGTGTGAAATCAAATTGTAGATCGCGGCAAA G [121392] 121443 29 100.0 36 ............................. TATGCTAATATTGATTTATAATTATTAGTTGTATCT G [121458] 121509 29 100.0 36 ............................. TTTCTAGAGTTAAGTTTTCAATTTTAGGTAGTACTG G [121524] 121575 29 100.0 36 ............................. TCTGCTTCCATGTTTTGGGCAATTCCTGTTTTCTTA G [121590] 121641 29 100.0 36 ............................. ATGATAACCCAAACTCAGCCAAACGGGGCATGTCCG G [121656] 121707 29 100.0 36 ............................. GAAGAATGTTAAGCCCGCCGAGAATGCAACTACAAC G [121722] 121773 29 100.0 37 ............................. GAGATTTCTCGCATAATCCTGCATTGCTTTTACTCTG G [121788] 121840 29 100.0 36 ............................. CGATTGGTTGCAACAGGCCAGCCCAAACGTTTATGT G [121855] 121906 29 100.0 36 ............................. ACGTTTTGAAACAACAGGTCAACGATTCTTCCACGT G [121921] 121972 29 100.0 36 ............................. CTTGATTTTCTCCAAAGGCACACCGGATTCCATCGA G [121987] 122038 29 100.0 35 ............................. GATCATGCCCTTATCTGTTTTATACGCGGTAATCG G [122053] 122103 29 100.0 37 ............................. TTGTAGGTATTGAATCTGCTTTGAAAGAGGAAGCCTT G [122118] 122170 29 100.0 35 ............................. GTACTACTGCTACCGTTGTTCCCACTTCCCGAGAA G [122185] 122235 29 100.0 36 ............................. ACCTTTTGTTACCACGATTAACACCTACGCGGTTAA G [122250] 122301 29 100.0 35 ............................. AATACTCACCATCCTCGGGAGCAGAAACCTGTATG G [122316] 122366 29 100.0 37 ............................. AATGTTATGGTTCTTGTGTCAGCCAGGCCCTCTGCGG G [122381] 122433 29 100.0 36 ............................. ATTAATCTGGATGATAATATACTTTTTCTATACGAT G [122448] 122499 29 96.6 36 ..............G.............. GCTACTTTAGGTTCTACGGCGGCACAACAATCGGCG T [122511] 122565 29 100.0 36 ............................. TCGAAGAGTGGTGTTGCCTGGCCGCGTGGTTTGGTC G [122580] 122631 29 100.0 36 ............................. GTGGATCGTGGGGGCATCATTAAAACAAGAGGATAC G [122646] 122697 29 100.0 36 ............................. ACAATTACCGCTGCGGATGGGCGTTATGTCATGATT G [122712] 122763 29 100.0 34 ............................. TGTCTACTTCTAATATTACCGGAAGTGCACAATA G [122778] 122827 29 100.0 35 ............................. GAAACAAAGAAATATACCTTTCGCGGAAAGGATTA G [122842] 122892 29 100.0 36 ............................. ACAGAGCTGCGGCCGCCCAGGTAAGGAGATTTACTA G [122907] 122958 29 100.0 37 ............................. TATGCAATGTTTGTCCGTGAACTTGCAAGTGGGTAAA G [122973] 123025 29 100.0 37 ............................. ATTGAGGACCTCTTTGTCCATCCCGCTTTGAATGATC G [123040] 123092 29 100.0 38 ............................. TAGCAGCAACCTCGCCACCGATATTGAAAGCATACTTA G [123107] 123160 29 100.0 36 ............................. AGCTAATATCTATAAACAGATCGAGAACGAGAATGA G [123175] 123226 29 100.0 36 ............................. TATAGAGAAGGAAAGCCAATAGCGATTCCCGAACCG G [123241] 123292 29 100.0 35 ............................. ATCCCACACACCTGGATAATCCGCTCGCAAAACAG G [123307] 123357 29 100.0 36 ............................. TGGTTACACAGTTGTTCCCTGCCTGGTTGTGGGTGC G [123372] 123423 29 100.0 37 ............................. AGATTTTCCCGCAACAAACTCACAACTGTCGCATATA G [123438] 123490 29 100.0 35 ............................. TTTATTCTTACGTTGCTCCTTGCGCTTCTATTAGT G [123505] 123555 29 100.0 36 ............................. TTTTCAATAGAAAATGAAGGGTCAGAGGATTGGTTC G [123570] 123621 29 96.6 35 A............................ TTGGCGTCTGCATATCCTGAAAATGTTTTGCTTAC G [123636] 123686 29 100.0 36 ............................. GTACTAAATCCGGATGTACCCCTTTAAGATTATTTA G [123701] 123752 29 100.0 36 ............................. ATGTGAGTTCTTTTGCCAGTTGCCATTTGCTGCATT G [123767] 123818 29 100.0 36 ............................. ATCCAAAATGCGAAATACCTGCTTTAGCTGACGAAA G [123833] 123884 29 100.0 35 ............................. CGAGGTTAATTCAATACCTTTGTCAATAATCACCT G [123899] 123949 29 100.0 25 ............................. TCCTGATCAGGTCGGGGATCAGGTC G [123964] Deletion [124003] 124004 29 100.0 38 ............................. CATTATCACGCTATTATTTTCAATGCTGATCCTACCTC G [124019] 124072 29 100.0 37 ............................. TCTGATAAGGCAATAGGCAAGCTGCGAAACTGCGGAA G [124087] 124139 29 100.0 36 ............................. ATACTATTTCTGATACATCAAAGGCCATTAAGGACC G [124154] 124205 29 100.0 35 ............................. GTAGGTATAGGCGCACCAACATTTACAACGCGGAG G [124220] 124270 29 100.0 37 ............................. CATTGCAAGTGGCTGGTGGTATTCAAATTAAAGAGGG G [124285] 124337 29 100.0 37 ............................. GCAGTGTATTTATCGTTGGAGGTACTGAACAAACCTC G [124352] 124404 29 100.0 38 ............................. GTGGAATGAAATGATGTATGAACGCCAGCGGGCCGAGT G [124419] 124472 29 100.0 36 ............................. GAGAATGAACCGGATATTACTACGCCTGGAAAGGCG G [124487] 124538 29 100.0 36 ............................. ACAACCTTAATAAACCGGTTATAATATTGACTGCAA 124603 29 100.0 35 ............................. ATAGCGTTATATAGCCGATCAACAAGCATGTAATA 124667 29 100.0 36 ............................. AAAATCCCATCTATATGACCTGCAGTTGCTTAAAGG 124732 28 96.6 36 ............-................ TTAGAGGCATATTGCGAGATGTTGGCATGTATAATA 124796 29 100.0 35 ............................. CGTAAAGGAATACGGAATAACTAATATCCTTCCAT 124860 29 100.0 36 ............................. CTCTTTCGAGGTTTGCAGGGTCGATAGACGAGAATG 124925 29 100.0 35 ............................. GAAACAGGGAGAGACTTTTGTAACGCGGGTCTGTA 124989 29 96.6 36 .C........................... GGTGAAGGCAACGGTTGATACGATTAATAGTTGCTT 125054 29 100.0 36 ............................. TTTGTAAGACAATGCCTTTTTTCTTAAACCGGTAGA 125119 29 100.0 36 ............................. TTCAGGATCGTACGTATTCTCAACATCTATTAGCAC 125184 29 96.6 36 .........A................... GTTACTACACATACTGTAGTTAAAGAACAAGGAAGT 125249 29 100.0 36 ............................. TACTTTGCAAGACGCCTGTGCGTTTAAGATTCTCAA 125314 29 100.0 36 ............................. TTAAATAAGGGAGTGTATGATTGGGCGATAGAGAAT G [125329] 125380 29 100.0 35 ............................. CTGTTAGAGGCAATGCACGTCTGGCTGTGTAGAAA G [125395] 125445 29 96.6 32 ........................A.... TAAATTTAATTGTTAAACAAACAATTTGCAAC G [125460] 125507 29 93.1 39 ..........C.......T.......... GACACATACTCGACCAGGGGACACGCCAGCAAACGAAGC A [125523] 125576 29 86.2 0 .........C...C....A.........C | ========== ====== ====== ====== ============================= ======================================= ================== 106 29 99.6 36 GTGTTAATCGTATTAGGTGAGATTGAAAT # Left flank : CTATTGAGGAATATAAACCTTTTAAAACCCTGTGGTAAAATGTATGTTATTTTAGTTTATGATGTCGGAGAGAAAAGAGTCGCCAAAATGCTCAAATTATGCAGGCAATATCTGAACTGGATACAAAACAGTGTTTTTGAGGGCGAAATAACCGAAGTAAAGTTGAAAGAACTTATCGTTCTATCTAAGAAAATATTAAATGAACGTACTGATAGCGTTATAATCTTCAGTAGCAGAGATCAAAAGTGGCTTGACAAACAGATAATTGGTGTAGAAAAAAGTGATCTATCCAATATTTTTTAGTCGTCGATCTACCATTGTCAGCCAACACAATGATGTTTCTTTCTTTAAAGAACCACTTAAAAAATTGATTTTCAGCGGTCGTCGATCCCCAGGCAAAAATCGAGGATGATAGGTCGACGACTTTTTGTTGATAATTTGGTATATTTATAGGCTTGTGAGGTGAGGATTGGCGGGGATGTGAGATGGAATTGTGGCGG # Right flank : CAAAACGTTCCCGGCGCTGGCATCCCGAAGCTGGATAAATGTTAATCGTAATACTACCAATTACCGCAATAATCACAACGGCAGCCGGTACAAAAATGATATTAATTGTATCACCAAACGCCTAATAAAAAGTGCGCTCACCAAACAATCCCCCCTCCCATCTGTTATCCCACAAAAAAAACATATGCAATCAACCCTCTTCCTCGTCCGTCACGGTCAGTCACTCTGGAACCTGGAGAACCGCTTCACTGGCTGGAAAGACATAGACCTAACGCCAACAGGCATTGCAGAAGCCGAAAAAGCAGGTATTGAATTGAAAGGCCAACACATCGATATCGCATTTACTTCTACTCTCGTACGAGCTCAACATACCCTGGATATTATACTGAAAGCCTGCGACGACCAGCAGATCCCGGTGATAAAAAATGCTGCACTCAATGAACGCTCATATGGCAATTTAGAAGGACTCAATAAAGCTGAAACTGCCAGGAAATATGGCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTAATCGTATTAGGTGAGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [35-35] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA //