Array 1 4354159-4356605 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066369.1 Shewanella putrefaciens strain CGMCC-1.6515 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 4354159 31 100.0 36 ............................... GCTTACATCAAACCTACGGTTTAATAATCCCTTTGT 4354226 31 100.0 37 ............................... TTTGATCAGTAAGGCAGAGGTTCCGCGCGCATCAAGT 4354294 31 100.0 35 ............................... GCCCTCGAGTAATCATGCTTGAGAACGTCGAAGGT 4354360 31 100.0 36 ............................... TTCTAGCCACTCGTCGCGCCACTGTTCAAGCCATGT 4354427 31 100.0 36 ............................... GTCAATTTTATGCTGGCTGTCACTGGGTTTGGTGGT 4354494 31 100.0 36 ............................... TTATAAGAGCAACGATGCAATAGGGCGCTTAATCGT 4354561 31 100.0 35 ............................... TTCATTTTTATAATCACCGTCATAGCCAAGTGGGT 4354627 31 100.0 36 ............................... CGTCACCTTCGGTACATGTCTGAAAATTTGCACCGT 4354694 31 100.0 36 ............................... TCGCGGAACTGGGCAAATATGGCACCGCTTGATTGT 4354761 31 100.0 37 ............................... GTAATAGCGATTGATTGCCGTGGCGAGTGGAGGCAGT 4354829 31 100.0 35 ............................... ACAATCTAACGGTGACGGCCATGGCGAACTCAAGT 4354895 31 100.0 36 ............................... ATTTGGGTTCATATTCTTGAACACAAACGGACGAGT 4354962 31 100.0 36 ............................... AGCTTCCTGCTTGGCCTGTTGTTCAGCCTGTTCCGT 4355029 31 100.0 35 ............................... GGGTATATTATTTAGGGATTATTAAACCGTAGGGT 4355095 31 100.0 35 ............................... GCTCACATGCTGGACTTTGATACCGCTGAATTTGT 4355161 31 100.0 36 ............................... GCTTTAGTGTTGAGCGTTTAAGCGCAGAGATCACGT 4355228 31 100.0 37 ............................... TCAGTTAACTCTATAGTCCTTACCAGTGCACCAGAGT 4355296 31 100.0 36 ............................... TGCAAAGTCGATATCTGCTGGTGATATTGGTCTAGT 4355363 31 100.0 36 ............................... TGCATTGCTGATTTTATCTAACTGCATACTCTGAGT 4355430 31 100.0 36 ............................... ACCACAAGCAATGCTAAAGCTTGCTACTGCGTTAGT 4355497 31 100.0 35 ............................... TCGCGCTGTGCAATCGCTAAGTCGAGACCAAACGT 4355563 31 100.0 36 ............................... AGAGATAGTCGCTTATCAGTATCTCTACTCAATAGT 4355630 31 100.0 35 ............................... ACTGAAATACTGAGTGTTGTCATTGTACATCTTGT 4355696 31 100.0 36 ............................... CGCTAACAGACTGGATACTAAACCAGAACGTAGAGT 4355763 31 100.0 36 ............................... CTGCCGTGGCATCATTGCTGCACAGCATTAGGGGGT 4355830 31 100.0 36 ............................... CTTCGTCAGCCGTTGCAATACCAAGTGCGCCAGTGT 4355897 31 100.0 37 ............................... TTAACTGCACAAGCTGCTCTGGATTTGGTGATGACGT 4355965 31 100.0 35 ............................... ACTAACAAGCAGTTTGATGAGGTAACAACTTACGT 4356031 31 100.0 38 ............................... AAACTAACAAAGGAAGTTGTGCAGCGGTGGGCTTGCGT 4356100 31 100.0 36 ............................... AATAACTTTGAAATCGACTTTTGATAGCTTTAACGT 4356167 31 100.0 36 ............................... ATATGTGATTAGATAAAAATGCTAACTCTTAACTGT 4356234 31 96.8 37 ....T.......................... TGCTAATGGTCTACCTTCTGAATCAACTTCTCAGGGT 4356302 31 96.8 36 ....T.......................... GGCTTTGTTCGCGGCTTCGGTTCATTTGAAGAAAGT 4356369 31 96.8 38 ....T.......................... AATTTCGAGTAACACTTCGGTGTTAGGGTCAATAATGT 4356438 31 96.8 38 ....T.......................... GAAACGGGTGAAGAACCGACAGTATGTGCTAACAGTGT 4356507 31 96.8 37 ..............A................ ATTGAGGTTTCAAACGCCATCGTGCGAACAAACTCGT 4356575 31 96.8 0 ...................A........... | ========== ====== ====== ====== =============================== ====================================== ================== 37 31 99.5 36 CGCGCCCCGCACGGGGCGCGTGGATTGAAAC # Left flank : AAGTAAATTTGTGGGGGAATTTGTATGATGGTGCTAATTACCTATGACGTATCTTTTGACAATGAAGGTGGGCAACGTCGGCTTAGGCACATTGCAAAAATTTGCCAGAACTATGGCACCAGAGTGCAGTATTCGGTGTTCGAATGCGATATCGACCCTGCTCAATGGGTTTCTTTAAAATCGAAACTGTTATCAACCTATGATGATAGTATCGACAGCTTGCGTTTTTACATTTTGGGTAAAAGCTGGCGTAGTAAAGTAGAACATCATGGTGCCAAAGCCACGCTGGATTTGTTTGCTGATCCTCTCATTATTTAGCTAACCGCTAACCTATAGTGCTCTTTAAAAAGCCGGAACATTAGCGGCATCTTTAGTTACTGATCCCAAAGGTAATTAAGGATATCGCTTTCCTTTTCCCATGTATTATCTTTGAATTAATCTGACGTTAGCGTAAATGTGGCTAACAGGCTAGACTAGCTCTGCCTTTGCAAAAAGGCAGT # Right flank : CTCTATCGTAGGATAACTACACTAAACCGCCTCATGTCGCGTCCCGCACGGGGATAAATAGGTTCGGGGTCCTAAAACCTAGGGCCTATCTCCTAAAACCTAGGTCCTAGCCCCTAAAACCTAGCCCCTACGCATTATGCTAAAGGTCCGATAAACAGTATTTTTACGCAATTAGTTAGCTAGGCGATAAAGCTCTTGCTGGTAGGCTAAACTGCCCCACAAGGCCCAGCTTAGGGCCTTTGTCTCAAGGGCTTGGGCGGAGGGTGGATTAGGCGTTAACTGCTCAGTTTTTTCGTCATATTTGAAACCCTGTGGTGCTTTTTCGGGTTGCAACACAACCACATCTTTGCCTTCCATCAGGGCGAAGTTTTTATCGTATTGCATTAACGCGCGCCCCGGCCAATCGTCGCTCACCTGAGTCAGATCGCGACCGAGCATAGGGTAAGAATCTGAAATACCAATTAAAGATAGCAAAGTAGGTGGTAAATCAATTTGACTAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.15,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //