Array 1 21476-23757 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZXX01000078.1 Lachnoanaerobaculum sp. MSX33 contig00022, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 21476 28 100.0 33 ............................ CAGGCGAAGAGTTGGAGTTTATAAGCTTTGAAC 21537 28 100.0 33 ............................ TGCGACTGGGTCGTAGGGGCTTGCCGTGTTGGC 21598 28 100.0 33 ............................ CGAGTTGAAAATTTTTAAAAATGAAGCATTTGG 21659 28 100.0 33 ............................ CCTGATTTGAAACAAATTTCTTCATATGCACCT 21720 28 100.0 33 ............................ TGCCCACACAACACCTACTAAAGCTCCTACACC 21781 28 100.0 33 ............................ CCGACAACAAAAATATATGTATCACCTATTACA 21842 28 100.0 33 ............................ CGGTGCTTTCCTTGCCTTGCGTCCGTCATTTAT 21903 28 100.0 34 ............................ TACTGATTTATAACTATATCAATTATCAAAGCTA 21965 28 100.0 33 ............................ CTGGAAATATTATCAGAATGGGAATATTGTAAC 22026 28 100.0 33 ............................ TACGGCAAAAGTAGGCAGTTTAGTATTTTTTAA 22087 28 100.0 33 ............................ CGCATTGCAGATGGCAGGGAAAAAGCAATATTA 22148 28 100.0 33 ............................ TGAGATAGAAAAAATGATAGTCCAACTAGGTAT 22209 28 100.0 33 ............................ CAGAGACGATGACAGAGGTTATAATAATACTAC 22270 28 100.0 33 ............................ TGGAACGAAACCTATTTCAAGTTGAACTATACG 22331 28 100.0 33 ............................ TGAGCATCGCTGCAGGTTGTGCACTTGACGACA 22392 28 100.0 33 ............................ TATGTACCTTGTTCAACAGGTAAATCAATAATT 22453 28 100.0 33 ............................ CAGAAGTTCAGTACAATACTTATATGAATGATA 22514 28 100.0 33 ............................ AAGAGATTTTAAAAGATTATGATAATATAGAGA 22575 28 100.0 33 ............................ TCATATCAAATAAATAAATAGATTGATTATCTA 22636 28 100.0 33 ............................ TCAGATATATAATAAAATTCTATATTAATATCA 22697 28 100.0 33 ............................ TATCTTTATCTTACTATCCAATAACCCCAGTAG 22758 28 100.0 33 ............................ TTGCTTGCGATTGTCTTATTTCTTTTTCGTACT 22819 28 100.0 33 ............................ CTGCTAAGGCAAAATGGCATTGATATCGGCGCT 22880 28 100.0 33 ............................ TAGTTTGGCTATATGATAATATGCGTCTTTTTC 22941 28 100.0 33 ............................ CAACCCTGAAGGCTGGACGGAGTACGATAGATA 23002 28 100.0 33 ............................ CCTTACCTTTTATTTTTTCATTAACGTAACAAA 23063 28 100.0 33 ............................ CGGCAAAAACAATTATACTATTTTCGCAAAAGA 23124 28 100.0 33 ............................ CTCTCATCATTCTTAGATGCTAAAAATTGTGTT 23185 28 100.0 33 ............................ CGTTTAAGTCGTTAGAATTCTGTGTAATTCTAC 23246 28 100.0 33 ............................ ATTATCAGAATTTTCAGACAATAAAATAAATTA 23307 28 100.0 33 ............................ TTAGATTAGATAATCAATCAGAATAGAATAATC 23368 28 100.0 33 ............................ TAATCTATCTTAAATATTTCTATTATTTCTTTT 23429 28 100.0 33 ............................ CATACAGAGCCAACAACAGCACTTGAACATATG 23490 28 100.0 33 ............................ CCCATCTTGTACCGTAATTCATTTTCTCTGATA 23551 28 100.0 33 ............................ CGGCTACTACAAACGCTCGGATGGACATCCACA 23612 28 96.4 30 ...................A........ CTATTCTATTCACGATTTTTTCTTCATCAG 23670 27 82.1 31 ..A.....T.....T..-.......A.. TACCACATATTATGTTCCATCACCATCAGAA A [23694] 23729 28 78.6 0 A.A...........T.....A..T..A. | C [23753] ========== ====== ====== ====== ============================ ================================== ================== 38 28 98.9 33 GTGTTCCCCGCGTAGGCGGGGGTGATCC # Left flank : AAAGAGAAAGATGTTATTATCGAAATAGGTGCAGTAAAATCTGAGGGTGGAATAATAAGTGAATTTCAAAGTCTGATAAGCTATGAAGGAACATTACCAAAACATATAGTTGCAATGACAGGTATTACCACTAATATGCTTAAAACTAATGGTAAGAGTGTAGATGTGGTATTAAAGAATTTTAAGGAATTTATAGGTGATTTGGATATCATAGGATATAATGTAAGTTTTGATATTGAATTTATAAATATTGCACTGTCAAAATTTGAACTTGAAAAACTTGAAAATAAACGATATGATTTAATGAAGTTTGTAAAAAATGAAAAACTATTTTTGGCAAACTATAAATTACAAACTGTGATAAAGGAATATGGGGTTGGTGATGAAGTACCACATAGAGCATTGGAAGACGCAAGGCTAATATACAAGCTTGCTGTAAAAGTAAACAAATTCAGGGATTTATATAGTCTGACATAGCGTGTTTAAGGGATCTTATTACT # Right flank : CTTATATTAAAATTTGTATCCTTTGGTAATTTTGTCTTATCCTTATATGCAGAAGTACTTTGAGATATTTAAACCTGTATTTATTAATGAGATTGTATAAGTAATACTATAAAGAGAATACAAATACCGTCACCTGCTTAATATATCCTGCAGGGCATCTGAATCCAGTATTTTGATTACAGGGGGATTATAAAAAATAATTTTCTCGGATTCCAGGCGGCTTAATTCCCGGTGCAGGGAGGTTCTGGATACATTCATAAGCATTGCCCATTTTGAAATGCTGTCAGGAATTGTGACAGTATCTTTACCTGATTGACAGGACTGCATTAAAAGCCAGAATGCCGCTTTTTGTGCGATGCCTCCGTAGGAGAGCAGCTCAAGTCTTTGCTGAAGCATATAAGTGGCAGTGGAAATTTCGGTGGTGAAATTTTGTAATATGCAAAGATTTAATTGCATAAGCTTTAAAAGCTCATCTCTATGTAAGAGCATTATCTTTGCAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTAGGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //