Array 1 128-1657 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBDX010000002.1 Psychrobacter sp. MF31 MF31_ctg0002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 128 28 100.0 32 ............................ AAGTCGCTGTTGGCGCGAGGCAAGTATTTTTC 188 28 100.0 32 ............................ TACTATATCTTTAACTTTCAGCGCATCAGTTA 248 28 100.0 32 ............................ TTGATATTGGGTCGATGATTGAGCGCATTAAC 308 28 100.0 32 ............................ AATCGAAGCTGTGAAACAAGCTGGTTGGAATC 368 28 100.0 32 ............................ GTCAAAGCTTGCTAAGGCTTGGACGTTGGTTA 428 28 100.0 32 ............................ ACCTAATGGCTATGGTTGTCTGTGTTGGGTTA 488 28 100.0 32 ............................ TCCAGCGGTCACTAGCGCAATATTTGTACCGA 548 28 100.0 32 ............................ GCTACAAAAGCGGATCAGAACGGTCAAAATCG 608 28 100.0 32 ............................ TACAACGTTTGAAGCTTGGAGCTGAATTGGTG 668 28 100.0 32 ............................ TTATCGCTTAATATGATACCCACTTCGTCTTT 728 28 100.0 32 ............................ TTCGATGTTTCGCAATCGCTGTGAAGTTAAGT 788 28 100.0 32 ............................ ATGATAGACTGTTTGCGTCAGTGCTATAGACT 848 28 100.0 32 ............................ ATAAATTTCAGCCATTTCTTTTGCCATCTTGC 908 28 100.0 32 ............................ AACAAAGCCATGGTTGATAGCGACTTCCGCAA 968 28 100.0 32 ............................ AAGCAAATGGTTGATAGAACGCCTGAGCTTAA 1028 28 100.0 32 ............................ TTAATATTCATGTCTGGCAAACACGCAAACCA 1088 28 100.0 33 ............................ TGATTTTTTGGTAATGAACAGCGATGGCAGCTT 1149 28 100.0 32 ............................ AAGATTGCCACCCGCGAAATTGAGCGTATTTT 1209 28 100.0 33 ............................ GATTGCCGCCGGATTTTTTGCCTCATTCAGCAA 1270 28 100.0 32 ............................ TTACATTACTTAAACGTGATTTAGGTAATAGG 1330 28 100.0 32 ............................ AGAATCATTATTGCCATGCTTTAGTAGTCACA 1390 28 100.0 32 ............................ GAAAGTGGATAGATCAGCGCTTTTGTTAACAT 1450 28 100.0 32 ............................ TCTACAGTTGGGTCAATATTAGAACCTAACGA 1510 28 100.0 32 ............................ TATAAGAGCGACACTTTTGGAGTGAAAGGCGC 1570 28 100.0 32 ............................ TGATATGCCGCAGCCATTGATGTCTCCTGCAT 1630 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 26 28 100.0 32 CTTCATCACCGCATAGGTGACTTAGAAA # Left flank : CTGATGGCTTCTAATTTGAATTCTCGGGTATATTGATTGCGTTTGGTGGTCATACTATTTTCCTTCTTTGGGTTAGTATAAACCTCTTATGCGCTGTCCAAGTTTATTATGCCACTACAAACGATAAC # Right flank : ATCTCTAAGCATCATAAATGCTGCTAAACCGTCCTTCATCATCGCATTTATTTAATTGCCATGCGACAACTGTTGACGTTTATCTCTGTCTACAACTAAAAACGACTTCCATAAAGCTGATTAAAATCGTAAGGTATAGCTTGAGTGGAGGTTAACTAATTCAAGGGGAATGCCGAATATGGAAAGTATCACTATTGCTCAATTACAAAAAAAGTCCGTGGGAATTTTTAATGATGTGATTGGTCTATTTAATATTTATATCCAGCTCATTCGTCCCCGTATCAGCCTTTCAGAAAATTTTCCAATTTATCAAAGGCTGGTTCTAGCTAAACCTACGGTAGTTATAAAAACTGATGAAAAAATACAGCTAATAAATAGTTTTGAAATCTTTTATTTGTTAGGAGAATTAAATTCAAACAACAAATTATCTAAAGAAAAAATATTATGGGGTCAAATTATAGAAGCCGATTTTTGCATCCGTTACGCATTTTATGAACTAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCATCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 690480-694108 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBDX010000001.1 Psychrobacter sp. MF31 MF31_ctg0001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 690480 28 100.0 32 ............................ AATGGGCAAAGGCTTAAAAAAGAGCGCTGAAG 690540 28 100.0 32 ............................ AAGATATGGCGCAGGCCATGACGCTCGCAAAA 690600 28 100.0 32 ............................ AACAGTATTTTGAAGGCGACACACGCGAAGTC 690660 28 100.0 32 ............................ CTGCGCGCTGATCCTGATGATGCGCCCGATGT 690720 28 100.0 32 ............................ AACGCTTTGGGGTCTGCCAGTAGTCACCACTC 690780 28 100.0 32 ............................ ATGACCGTTCGCCGCAGCAAGATGGGCGATAT 690840 28 100.0 32 ............................ AAGAAACAAACTCATTTTGCTTCATTCCAACC 690900 28 100.0 32 ............................ AAATCCAAGTCATTAGCGGTCAAATTACTCGT 690960 28 100.0 32 ............................ AATTAGACGCCCTGCGATATAGATCAGTGTTG 691020 28 100.0 32 ............................ ATCTGCGAGTATCTATCAGAGCCGCTAAAGAT 691080 28 100.0 32 ............................ ATCTGCGAGTATCTATCAGAGCCGCTAAAGAT 691140 28 100.0 32 ............................ ATACTGTCTGACGTTTCACCTGCCGCAATATC 691200 28 100.0 32 ............................ TGCCGCCGATTTTGACCAGCTCTCACTGTCAA 691260 28 100.0 32 ............................ TTGCCGGAATAACTCAATGTTGTCGTTGTAGT 691320 28 100.0 32 ............................ AAAGAGATTCACTTGTTACTAACCAGCCTATT 691380 28 100.0 32 ............................ AACGTCGGATTTTATGTAGGAGTGTAGCTATG 691440 28 100.0 32 ............................ TCAACGCGGTCTTTGCCATACTTGTTAATTGC 691500 28 100.0 32 ............................ AAAAGACGCTGTGATGCCAAGCCGTGTGTTTA 691560 28 100.0 32 ............................ TGATTTGTGCGTGATGATTCGGTGAGTTGGTA 691620 28 100.0 32 ............................ AAAAACAGCGTCTCAGATGGCGTACAAACTGC 691680 28 100.0 32 ............................ ACTATCCAGCCTGGCGACAGCTACTCAGCAAC 691740 28 100.0 32 ............................ AACCATGTCTGCCAATTCTTGCTGACTCAATT 691800 28 100.0 32 ............................ CCCGTGACGGGCTTATTTTTTTAGAGGCGATA 691860 28 100.0 32 ............................ TACTACCTATGCAAACTATGCACCTGTGTTAT 691920 28 100.0 32 ............................ ATCACGTCATTAGCACCAAGGGCGCTTACGGC 691980 28 100.0 32 ............................ TTGCCGTCTATCAGCTTACTTATGAGTCCAGC 692040 28 100.0 32 ............................ ACAGCGGTGATTGGTTTTTTCGGGACGGCGGA 692100 28 100.0 32 ............................ GGTCGGGGCAGGGCTGTGGACGGTGGCATTAA 692160 28 100.0 32 ............................ CTTGGAGTTGGCCTGCAATTCCAGCCCCTGAA 692220 28 100.0 32 ............................ GTTCAAGTTGACGTAAGCTTCGACCACTTCAA 692280 28 100.0 32 ............................ GAAAACTACAAAGCGCGCGCGGTATTTGTTGA 692340 28 100.0 32 ............................ CAAAACGTGCTGACCGGCTGATGGTCGTTAAC 692400 28 100.0 32 ............................ TAGGATCAATGCAGGCAGAATTTGAAAAAATG 692460 28 100.0 32 ............................ ATCGCCAGCGCTAGCAAAATGATTGCTAGTCT 692520 28 100.0 32 ............................ ACATAATCGCTAATCGTTTTCACCGCCTCATC 692580 28 100.0 32 ............................ GCTTGGGGTGCTTGGGTCAGATCAGACCGTGA 692640 28 100.0 32 ............................ ACCGCGCCGCTGTGCTCGATCTTGTCAGTAAA 692700 28 100.0 32 ............................ TGCGGCTTCCATGGCTTGGCGATCAGCTTCGC 692760 28 100.0 32 ............................ GAGATTATCGGGACCACTATCCAATGTTTATT 692820 28 100.0 32 ............................ ATGAAAACGTATCAAAAAGGCGACTACATCGT 692880 28 100.0 32 ............................ ACTCGTTATTGATGTTGAAACGCCGGAAACTA 692940 28 100.0 32 ............................ CATAACGCCAATTTCAAAAATGCGTCTTTTTA 693000 28 100.0 32 ............................ CGCGAGTCATGGGTGATATGTCGTTTGAGGTG 693060 28 100.0 32 ............................ AAGATGGCAGCCGCGCCGTTCCTGCGCCCCGC 693120 28 100.0 32 ............................ TCTTTGATCAAGACCTGATAATCTGAGCGCGA 693180 28 100.0 32 ............................ CACCAGCCATTATTACGGTCTGATAGCTCAGT 693240 28 100.0 32 ............................ CAGCGTTCGCTAAAGCCATACTGCGGCGCGTA 693300 28 100.0 32 ............................ AGTAGCGCAATGTCAGTCATATCGCTGCTTTT 693360 28 100.0 32 ............................ GGATGGAAAATAATAGCGAAGTGCAAATGCGA 693420 28 100.0 32 ............................ TGTTGCTCATCCGTTGAACGAACGTTTAAACG 693480 28 100.0 32 ............................ AACTCAAAACTCAGGAGTAGCAAGACCGCACG 693540 28 96.4 32 ..................A......... TACTCGCGCAACATGAAAGATGCTCGCGGCAA 693600 28 100.0 32 ............................ AAAATCTGAGAAAGCTTCAACTGAAAAGCTCA 693660 28 100.0 32 ............................ TTGATGGCGATAAAGATAGTATTGCCTATGCT 693720 28 100.0 33 ............................ CGTCGGATCGCTTGTGGTGGCAAAAAAACTATA 693781 28 100.0 32 ............................ AAAACGGCTCAATCACCAACGCTAAGATCGGT 693841 28 100.0 32 ............................ TCTTTGCTTAGTAGCTCATAAACCCACATCTG 693901 28 100.0 32 ............................ AAACATGGACGACTACGACCTTGACACGCAGC 693961 28 100.0 32 ............................ CACTCGTGATGATTTTGAGAAAAGCATAACTG 694021 28 100.0 32 ............................ GCCAAGCTGTCACAGCTTATTGTTGATATCAC 694081 28 92.9 0 ..........................GC | ========== ====== ====== ====== ============================ ================================= ================== 61 28 99.8 32 GTTTGCCATCGCATAGATGGTTTAGAAA # Left flank : GCGCTGGGCAAAGGCGCTTTATAAACGCTTGGCGGACGGCTTTGGGATGAAGTTTGTTCGCGAGGAAGGTAAAAACGCCAATGATGATTTGGGCGATATCGCCAACAGCTATCTTGATCACGGCAATTATATCGCTTACGGTTACGCCGCGGTGGCTTTGCATGGCTTAGGGATTAGCTTTGCGCTGGCGATGCTTCACGGTAAAACGCGCCGCGGCGGCTTGGTGTTTGATGTTGCCGATTTGGTAAAAGATGCTTTGGTCATGCCGCAAGCTTTTGTCTCGGCAAAGCTTGGTCACAATCAAAAAGAATTTCGGATGCAATTGATTGAAACTTGCCAAGATCAAGACGTTTTGGATTATATGTTTGGCTTCATTGTTGACACCTGTCAAAAAATACAATAATTTCAATGGTTTAAACTTGTGCCCTGAAAACGATATATTTTTGCTGCTTTAAACGTTATATAATTGATACTTAGAGGTTTTTGTTATAAAACTTCTA # Right flank : CTTCCCTTAAACATCATCGATTTAGAAATAAAAAACTGGATTAAACAAGATTTAACCCAACTTTTTTATAATTTTTTAACCTATAAATTTTACTTCGAGATTGCTTTAAAGTGAGCGACCTGATTGGCATTCGTAATCGTTAAGACCGGCAGATTGCTCGCGTCCTTACTTAAGCTAAATTTACCTTGAGCCATGGCACTCACTGCCGCATCAAAGCTTGCTTGCGGCTCAGGACAAGCCATTCTGGTGCTGATGATATTGCCCAATTGCACGTTACCCGCTGCAGCGCTGTAGTTGGCGCTCATTTTATTGCAAGTGTTTAAAAAAGCCACGCGATTGTTCGAATCAACCGTCATAAAATTTAAGATTAAAGGTTTTGCTGGATCAAAAAACAGCTGAGTCACTTTGCTGCCATCATTACGCTTGGCATCGATCAGTTGCCAGTTGTAGGCTTGTAGCGCGCTTGAGGTCACCGTTTGCGTCACAGGAGTCGCCGCGCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCATCGCATAGATGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTTGCCATCGCATAGATGGTTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //