Array 1 148684-151152 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSAG01000004.1 Cronobacter turicensis strain MOD1-Sh41s Sh41s_S5_L001_R2_001_trimmed_contig_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 148684 29 100.0 32 ............................. AACACAGCAAAACTGAAAGCGGCGGGCATCAA 148745 29 100.0 32 ............................. GTCGCTTTGACCTCTTTTTTAGTTTGTGCACA 148806 29 100.0 32 ............................. TATCCCCGAGTATGGACGACAGCAGAATGAAA 148867 29 100.0 32 ............................. GCTGCGCGCCAAAGGAGCGACTAAAATCGCTA 148928 29 100.0 32 ............................. GGTTTGACGGCAGAAAAGTGTTTTGAGTTAAA 148989 29 96.6 32 ............................A CCGGCGCCGATCATCATCAGCGCTGGGATCAG 149050 29 100.0 32 ............................. CCTACATTTACCTTTCAGTGAACACTTCAGGT 149111 29 100.0 32 ............................. AAATGCCGTTTACCTTGGAGCAGCTTGAAGGG 149172 29 100.0 32 ............................. AGTTACAAATATATTAGCGCGTAGGTGATTAT 149233 29 100.0 32 ............................. CGTAGCACGACAGCCTGACCCGATGGCCGCAG 149294 29 100.0 32 ............................. TTTTCCTTATCCGGTTCCCAGCACTGCCACTT 149355 29 100.0 32 ............................. CTTTTAACGCCCAGCTCCTTCAGCTTCGCATC 149416 29 100.0 32 ............................. GTAAATTTCCGCGCCCTGTTAAGATTGGCAGA 149477 29 100.0 32 ............................. GGTGTCTACCGGAGGCGAAAATGGCGAAATTT 149538 29 100.0 32 ............................. CCCCGCCCGCGCCTGCAACTGGTCGACGGTTG 149599 29 100.0 32 ............................. TGGTGCCAATGGCCGCGAACAGGTCAGCATAG 149660 29 100.0 32 ............................. TGTAGCCCTGAGAGTTTTTCAGCGAACAAATG 149721 29 100.0 32 ............................. CAAACCCGCCGTTAGTGTCAAGCTCCAGAAAG 149782 29 100.0 32 ............................. GGTCAGCCCCAGGCGCTCAAGCGCAGCGTATA 149843 29 100.0 32 ............................. CAAAATTTTTTGCATACTGCCGCTTAAATCGG 149904 29 100.0 32 ............................. TCGATAACCTTTTCCATGTCTTACGCCTCCGT 149965 29 100.0 32 ............................. CGTGACGGTTCTGTATCCTGCCTAGGTTTTCG 150026 29 100.0 32 ............................. GGTTGAATTCTTCACTGAAGGACTTTGCACAC 150087 29 100.0 32 ............................. GCATCTGGCGTCACTCTCACGCGGGTAAAGAG 150148 29 100.0 32 ............................. CCACCGCGGTAATCCGGGCAATAGCGATCGGC 150209 29 100.0 32 ............................. TCGATTCGTATGTTCGCGAGCTCATTTAGGGC 150270 29 100.0 32 ............................. GGACAAACATCGCGCTGGGTTGCCGTTATAAC 150331 29 100.0 32 ............................. ATGCTGAAAAGTTGGGTATCGAAATGGAATAA 150392 29 100.0 32 ............................. CTGTCACCCGCCTGCAGTGTGGCCCCTTCATC 150453 29 100.0 32 ............................. CGTGACTCGCTGGCTGGCGCAGGCGTGTCTGT 150514 29 100.0 32 ............................. TCGGTCACACGGATGGTTCCGCGCATTCTGCG 150575 29 100.0 32 ............................. ATGGACAAAGCGCCGCTGTTAAGCTGTCGTCG 150636 29 100.0 32 ............................. GAGAGGCGCCGGGCAGGTAACGAAACGTCCGA 150697 29 100.0 32 ............................. CACAGCTTGCGTGCCTGTTCGGCATACGCCTC 150758 29 100.0 32 ............................. CATCGCTGCCGACGTTGAAAACGAAGCTGTAG 150819 29 100.0 32 ............................. ACAGGAAGAGAATCTGCCGCTCAATCATTATC 150880 29 100.0 32 ............................. GGTGAATTTTCGGAGGGAACTGAAAAAACCAA 150941 29 100.0 32 ............................. GGTGAATTTTCGGAGGGAACTGAAAAAACCAA 151002 29 100.0 32 ............................. GCGTGACGCGGGTCACATCACACACGCCAGAC 151063 29 100.0 32 ............................. CGGTGAGCTCGCTGTTCGCGCTGTCGAGTATC 151124 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 41 29 99.9 32 CTGTTCCCCGCGCGAGCGGGGATAAACCG # Left flank : ATGAAAGCTTCAAATGGATGATGGCGAACAACATCGCGTTTATCGTCGTTAACATCAATATCAACTACCGGCGGCCCGCCGTGCTTGGCGATCTGCTGACCGTCACAAGTCAGGTGAAACAGCTTAACGGTAAAAGCGGGATACTAAGCCAGGTCATCACGCTGGAGCCCGAAGGCGAGGTAGTCGCCGATGCGCTCATCACCTTTGTGTGCATCGATCTGAAAACCCAGAAAGCGCTGCCGATTGACGGCGAGCTGCGTGAAAAACTGGAAAAACTCACAGGGTAAATTCTGCAATACCGGTGCGTGTGCCCGCCATCGTGGATTTATCGCCGCTGAAGATAAACAATCCGGTAGATGTTAACGGTCCACAAGCGTTGCTGAAAAACGCCTTCAAAATCAACAGGGCAGCCGTTCTTTAACAAGATGGGTTGTTGTAAAAATGTTGGTAGGATGTGGAAGGCGAAAAAATTCTAAGCAGTACAAAGCGTTACTTTTAGT # Right flank : A # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCGCGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //