Array 1 16667-17427 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACGPC010000006.1 Staphylococcus epidermidis strain R6039 contig00006, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     16667	    36	 100.0	    30	....................................	AGTGGACGCAAAAAGGCCGTTTATTCATCT	
     16733	    36	 100.0	    30	....................................	CATCTTACCTTGCTATTATGACGGTAAACA	
     16799	    36	 100.0	    30	....................................	TATCTTTTATGTTGGAACCAAATTCAACTG	
     16865	    36	 100.0	    30	....................................	TTGTAAAAGCTAAAAATGAGGAAGAACTGT	
     16931	    36	 100.0	    30	....................................	CAACCGAAATAGAACAAGCTATAAAAAATA	
     16997	    36	 100.0	    30	....................................	GAAAAATTCATTCACTCAATGGGAAATCAA	
     17063	    36	 100.0	    30	....................................	TGTTTATTCAGTTTTGTGATTTATATAATA	
     17129	    36	 100.0	    30	....................................	AAATCGCTCATGCGCATCACTACACAGAGG	
     17195	    36	 100.0	    30	....................................	GTCTCTCGGACGTTGGTTCGGTTGGCTAGG	
     17261	    36	 100.0	    30	....................................	TTATCTTCATCATTTGGACAAGCCCACATG	
     17327	    36	 100.0	    30	....................................	ATAAACCAGTCATACCTCTTGCCCAGTATA	
     17393	    35	  94.4	     0	...............-...................C	|                             	
==========	======	======	======	====================================	==============================	==================
        12	    36	  99.5	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT	                              	       

# Left flank :   ATTATCAAGCAAAAGAAAAATCATTTGTAATCTATTTATATCCAGAAGCTGGTCTTAGCATTAAAGAACAAATAAGATTTAGGAAAATACTAAATAACTTACCTGTTCCGGTCATTGTTTTAACCGAATCACCCCGTTTTTTATCTGAAAGTATTAAGGGACTAAATTATTTTATTAATAATATTCAAATGATTACAGAATCTTTTTTTGAAGATAGCTATTGGAATGCGCCAATTAATGTGGAAAAAGAACGGATTAAAGAGAGGTTTGAGTATTTATTTGTAAAATATTGTTCAGTTTTAGAAATAAAACCGATTATCTCTAACTACTTGCTTGCGGATATTATTGTTTTTAATGATATTGATCTTTATATCATTGTTTCATTTTTAAAACATTGTAATTTAGAATATCAATTAGATATCGATAAAACAAAAATTTCATTAGCGTTATCAACTTATCTATTTTCTTAATTATAATTCAAGGTTATAATTGTGCTAGAG
# Right flank :  CCCTTTCTTGAATGTCATTTCTAAGTTGTTTGCAACAGTTTATGGTTATTTAGAGAGCATAGTAATGAAAAATGGGATTTAGTACCAAAAGCAGGACGCTCACCATATGATAAATATAATGACGAGGAAACTTTTTATGCGTGGAAACGACAGGCTATGATATTTCTGAAAGAATCATACAATGATTGGGATATGTTAACGATTGCACAATATCATGGGTTAGCGACGAGGCTATTAGATTGGAGTTTCAATCCATTAGTAGCAGCTTATTTCGCTGTGAAAGACTTTGAGGATTGTGATGCTGTTATTTATGCTTATTTGAAAAAATCAGATATTAATGTCAAGGAAGTACATCCAATTGAGAGTAAGGGAATAAAGAAAGTGAAACCAAATGGACTAGCAACAAGAGTAGTAAGACAAAGTGGTATTTTCACAATTCATGAACAACCAACTGCGTCTATTGAAGATAACTTATCGAAAAAAGAAAAATTAAATAAAAT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.60,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//