Array 1 582286-582718 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGUN010000001.1 Enterococcus faecalis strain 4928STDY7071661, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 582286 37 97.3 29 ....................................G GGATTTACAATAACTTCGCTACCATCTTC 582352 37 97.3 29 ....................................A TAAGGCTAAAGAATCTATCAAGAAAGTAA 582418 37 100.0 29 ..................................... TTAAAGCGTTCCGAATAGCGTTCTAAGAA 582484 37 97.3 29 ....................................T AAGCATTTTTTTGATGTGTAATACTTATC 582550 37 97.3 29 ....................................T CGACCGTCCCATGTTGGAGCTCCAATCAA 582616 37 100.0 29 ..................................... TTATTTAAAAGACGGCAATATTAAAAACA 582682 37 97.3 0 ....................................A | ========== ====== ====== ====== ===================================== ============================= ================== 7 37 98.1 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACC # Left flank : TGTATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTTGCAAGAAAATATCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTACAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : AAACTTTTTTGATTTGGCTTTTTCTCCCCTGTTTTATAGCCATGTTGTTAAAAAACAAACTATCACCTCAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGTTTCAATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGTAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAA # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 200638-202476 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGUN010000002.1 Enterococcus faecalis strain 4928STDY7071661, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 200638 37 97.3 31 ....................................A CTGCTCATTCGTTTTCTCCTCCTAACACGCT 200706 37 97.3 29 ....................................C AGCGCCGGAAAAGTAGCAAGCCCCACAGT 200772 37 97.3 29 ....................................A CGTGCCTTCAAATCCAAAAAAGGTTTGTT 200838 37 100.0 29 ..................................... GGCTTGTAATGCCTGAGTTACAGTCTTCT 200904 37 97.3 29 ....................................A AACACTTCTTCTGCTAAAACAACATTTTC 200970 37 97.3 29 ....................................A TCGTTAATTGATGATGTAGCCAACGCCAT 201036 37 100.0 29 ..................................... GTTCTGTAAGGCTGTAGATCGGCCGGACT 201102 37 100.0 29 ..................................... GGACTTAACTTCTATAATGACCGGTTAAT 201168 37 97.3 29 ....................................A CCAGAAATAAAAGTTGACGTAAGTATTGA 201234 37 100.0 29 ..................................... AAGGGCAAAACTGAAAACGATACAACGAT 201300 37 97.3 29 ....................................G CTAAAGGATTTTTGATGATGTTTTCTCGT 201366 37 97.3 29 ....................................G GTGTCTATGTTTCGGAAGCCCCTTTCTTG 201432 37 100.0 29 ..................................... GATGAAAACCGATGGTATTTACTTTCACA 201498 37 97.3 29 ....................................C ACTTGTCCAATATGAATGTGTTGTTCTAT 201564 37 100.0 29 ..................................... TAGTTATTGAACCTCAACGCACACCATTG 201630 37 97.3 29 ....................................A TTAAGTTCGACTGGAAGGCTCTTATAGGT 201696 37 100.0 29 ..................................... AATCATGAGTGGGGATCGCTGCTTTATGA 201762 37 100.0 29 ..................................... AATATAGGCGCCTAATCGTTTATAATGAG 201828 37 100.0 29 ..................................... GTTTTAAATTCATACATAACGAAACATGT 201894 37 100.0 29 ..................................... TAGAAAAGACGTGACAGAGCAAACAGCGC 201960 37 97.3 29 ....................................A GGTACAATTTATGGATTGTCACATGTCAT 202026 37 100.0 29 ..................................... GATGAAAACCGATGGTATTTACTTTCACA 202092 37 100.0 29 ..................................... TATGCAGAAAAATTAGAGCAGCTGAAAAA 202158 37 97.3 29 ....................................C TCGTTAGAATGCCCTTCACAGCTGTTAAA 202224 37 97.3 29 ..................................T.. CTAATGAGCATTCATTACATATGTAGAAC 202290 35 81.1 114 ......................--.TT.CG......G ATATGATTGATGTAAAAATATCATTGATATGTATAAATATGGTTATTATATAAAAAATATAAGTAACGAATTAAAGCTTTGCTAGAGCAAGTGATGCGATTACGAAATTATTTA T [202324] 202440 37 67.6 0 A...........C...A....TT.CTT...G..T.GA | ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 27 37 96.8 32 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Left flank : CACAATTAAATGATAAACCAGAAGTCAAATCAATGATTGAGAAGTTAACTGGAACAATTAGTCAATTAATTGGCTATGAATTGTTGGAACATGAAATGGATTTGGAAGAAGATGGCATCACTGTGCAGGAACTTTTCAAAGCTCTTGGAATCAAAATCGAAACAACGAGTGATACGATTTTTGAAAAAGTTATGGAAATTACACAAGTACATCGTTATTTATCAAAGAAAAAATTATTGATTTTTATTAATGCGTGTACGTATTTGACAGAGGATGAAGTGCAACAAGTGGTAGAATATATCTCTTTAAATAATGTGGATGTCCTGTTTTTAGAACAAAGGGTGGTCCAGAACAGATTCCAATATATTTTGGACGAAAACTTTTATTTGAGTTATGAAAAAGCTTAAATTGTTATTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTACGGAACTTTGGAGAAAAAATAATTCTCCGAG # Right flank : AGAGTACGATTAGTTAAATATTTAGTTTTACAGCTATGTTGTTATTATATGTGTTGAACGAAGTTATTGATTTTAAAAGTAGTTGTTCCTCCTTTTTTTATATGCTACAATTTTTCTATATTAATCATTAGTTAAATATTTAAGGAGGTGATTATAATAAGAAGGAAAGGATTTAACAAAATAAAAAAAGAAATGGAATATGTTAAAGTAGTTACGAATTTACTAATGGTATCAAAATTTTTTACGCTACAGTCCGATGAAGATTTACATACATTAACTCTGTTTGGAACATTACTTATTTAATATTTATAGACGCTTTGTAATGAATGCGCTTTCTACGAAACTGGATAATAAAAATTGGCATTTTTCAAATGCTACTTTATGTAGTTTACTTTTTTATAGTGGCTATGTATGTTCGCATTTATTTCTTTTGAATAAAAATCACTTATCTATAAATCAAGAATTAATCCCCAATTTATTGAAAATGACACTCCCTGTTT # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.25, 8:1, 9:0.66, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //