Array 1 30766-33978 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZEJ01000032.1 Alishewanella sp. HH-ZS contig_00032, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 30766 32 100.0 34 ................................ GACTTTTTTTGCAAAGTCAACATCAACATATCGG 30832 32 100.0 35 ................................ TGGCTCGCCTGCTGCGCCTAATTACACGGCAATAG 30899 32 100.0 33 ................................ AGGGCTACAGCGGACGCTCAGATTGACGATTTT 30964 32 100.0 33 ................................ TGCAACCACTGCGTCAAATTCACATGTCGTTAC 31029 32 100.0 34 ................................ ACATTGATCGGCGATGTGCTGATAAGAAGGCCAG 31095 32 100.0 35 ................................ TCTAAGGTAAGTGATCGTCACGCCTTTAACATCAG 31162 32 100.0 34 ................................ GAGCCACCACTGCCGACTGTTCAAATGTGCGGTT 31228 32 100.0 34 ................................ TCCCTAAGCATATCCCTGTTTTTGGGAATATTTG 31294 32 100.0 35 ................................ ACGGGATAACCTGCACGAATATCAGGAGCGCAGTA 31361 32 100.0 35 ................................ TATCTTTAATTATGGAGCGCAAATGATGAAACAAC 31428 32 100.0 34 ................................ CTTGCGAGCATAAGCCCGGCGCAAAACGTCTTTA 31494 32 100.0 34 ................................ AGCTTGATAACGCTGCGCTGCGTGTATTTGGAAG 31560 32 100.0 33 ................................ TCCGCCACGATAGATGTGGATGGAGTTGATACG 31625 32 100.0 34 ................................ GGTCCAAAAATAAACGGCGCTACTTGGAATCCAA 31691 32 100.0 34 ................................ TGTTATGGCAGCAGTGACAATCATCTACGCCAAT 31757 32 100.0 33 ................................ CTCAACACTGGGTCGGGCGGTTCCGGCACAGGA 31822 32 100.0 35 ................................ CCTTTAACCCCTGTGAATCCGTCAGATTGGTACTG 31889 32 100.0 35 ................................ AGGTATTGCGCATCGAATGCGAGTTGTTCACCAGT 31956 32 100.0 33 ................................ TTGCTAAATTGCATTATCTTTACCTCAGCTGGC 32021 32 100.0 36 ................................ TGGTATCGCATTAGCGCAAAAAGCAGCTCTGGCAAT 32089 32 100.0 36 ................................ TTGTGGCTGGCTGCTTACGTACCACATGATCAGCAC 32157 32 100.0 35 ................................ GACCGCTGCAATACCGGTAGTTGGCCCAGCTTTGG 32224 32 100.0 34 ................................ AAACTGGGTACCCAGGCCAGCACCTGCCAGCACC 32290 32 100.0 35 ................................ AGGTAGCGCAGCTGGCGCCAGGCATTACTACCCGT 32357 32 100.0 34 ................................ GACAAAACTAACCCGCTGATTGAAGATATTATGG 32423 32 100.0 34 ................................ ACGTAATCACGAATGATTTCAGCATTGCGGTTAT 32489 32 100.0 34 ................................ CTTGCGAGCATAAGCCCGGCGCAAAACGTCTTTA 32555 32 100.0 34 ................................ CACGGGCAGGCATCGACTAACTGCGGCTTAAATG 32621 32 100.0 34 ................................ TTGTTACCCAAGCCATCGCTAAAGCGGTGAACCC 32687 32 100.0 34 ................................ TTATCGAAATCATCGCGCTCAACAATTGACGCCG 32753 32 100.0 34 ................................ TGCGAATCAAACGCTTTTTTAGTTGTAGATAAGC 32819 32 100.0 35 ................................ CCACGTTAAAGCAAGAGTGCCTGTAGCGGTGCCGC 32886 32 100.0 35 ................................ AGCGTGTGGAGCAAGCCGCTATGGCCAGCCATAAG 32953 32 100.0 34 ................................ GAGCAAATTATTAACCCGTTTGAGAGAGCACTTG 33019 32 100.0 34 ................................ GCGAACAGCCAGCACCGTCTTTTGGTCAGCGTGT 33085 32 100.0 33 ................................ GCCGGGGCATAGGGCGATTATAGTGCCTATCAA 33150 32 100.0 34 ................................ TTCGGCGTAGATGCCGGCTGGCCAGTACAGCGCG 33216 32 100.0 34 ................................ CAGATCATAAACGTTTAGAAAACTCTGCTCCTGG 33282 32 100.0 33 ................................ TGGTAAATGGCGAAACATTGGCAGCTGAAATTA 33347 32 100.0 35 ................................ GCGAAAGCATTTTACAAAAACAGCTGCAGCGCGTT 33414 32 100.0 35 ................................ CATGCGGCAGCTCCGAAGGAGCTTGCAAGCGAGGG 33481 32 100.0 34 ................................ CTTTGCAGGCAAATGGCCTGAAAGTTTCGACTAT 33547 32 100.0 35 ................................ CGTGAGACGTATCACTGCACCAACGTCGCCGAGAT 33614 32 100.0 34 ................................ CCGCAAGGGTATTTCAGCGAGCAACAACTTGCCA 33680 32 100.0 35 ................................ TTATTCAAGAACTACTCGGTCCGGGATCTTGCGGA 33747 32 100.0 35 ................................ CATCCCATAGTCACGCAAACCAAAGTATGGCGGGC 33814 32 96.9 34 ......................A......... AAAGCCGTTTGCGGCTGTGCTGGCTGCGCTGTTA 33880 32 96.9 35 ..........................C..... GTTAAAATGCCACGTTACAAAGCCCGATTCGACCC 33947 32 71.9 0 .........T......AAAT.CA....T...T | ========== ====== ====== ====== ================================ ==================================== ================== 49 32 99.3 34 GTCGCGCCTCACGCAGGCGCGTGGATTGAAAC # Left flank : CCCTTTTTTAGCAAGTAGCAGGTTAACCCTTATGATGGTATTGATTACCTACGACGTTTCATTTAGCTCAGAAGATGGCAAAACCCGCTTAAGGCGTATCGCTAAAATTTGCCAGGATTACGGTACCCGCGTTCAGTACTCGGTATTTGAGTGTGATATCGATCCTGCGCAGTGGGTAAGGTTAAAAGCCGAGCTTTTAGCCACTTACGATGAGGAAGTTGATAGCTTGCGCTTTTATATTCTGGGTAAGAGCTGGCGCAGCAAAGTAGAGCATCATGGTGCAAAAGCCGCGCTTGATTTATTCGCCGATACACTCATCATCTAGTCGCTAACCCTTAGTGCTCTTTAAAAAGCCGGATCTTTAGCGGCGGGCTTACTAACTGAATTTAAAAGTTAAATGTAAGTCCGTTGTATCTTTAAGTTCGTTATTTGAATAATCTCTGTGGGTTAGCGCTAAATACATTTTAGCGTTAGACTACACCCGCTTTTGCACAAAGGCA # Right flank : TACGCTGAACTATAAAGGTTACAATCGTGAAGGGTATTACTCCAGATTGTAATTTATTATAGGCGCTTTTGTTCACAACGTACTCTGGATCTGGGGTTAGCGGTAGATAAGATCTAAGGGTATTAATTCGTGGAAGCTATTTTTGGAAACCAGAATAAAAATAAAGCAGCTAATGGCGGGGGTCGAACCCGCATAAACGATCATAACACCGCCGCTTTACCATTAAGAGTACACTAGCTGCCCCAGTAATATAGAATATGGCCAAAAAGAGTGCTACAGCTTTAGTGTAATAATTGAGGAGCTGTGTCACTTCGATGCATCTTTCGCTTGTTCCGGGTTAGCTGATATCGAGGGAATTCGGAACGCTATATTTCAGTGGAAACACGATGAGAATGAAAAGAGTAACGAAGTATTGCCAAAAGCAGCTGCCAAGCAATCCCAGCTTGATAAAAGCTGAGTTTGTTTCCATAAACTCAGAGATCCTTGCTACAGATTCGGGG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCACGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.15,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //