Array 1 23976-23649 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV838502.1 Pseudomonas sp. HMSC75E02 Scaffold3822, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 23975 28 100.0 32 ............................ CAGTAGCTCGGAAAAAGCCAGGGCGTTGAGGA 23915 28 100.0 32 ............................ AAGCAGCTGCTGGGCGAGGACAGTGTCGAGGA 23855 28 100.0 32 ............................ ACCTTGCCGCCGGGCCGCCCAGAGTCGAACAC 23795 28 96.4 32 .........C.................. TTGTGCGGCAGTATTCGAAATTGCAGTAGCTC 23735 28 89.3 32 .........C........C........G TTCGCGCTCAAAAAGTACCGCGGCGGGATCGA 23675 27 89.3 0 .........C..G...........-... | ========== ====== ====== ====== ============================ ================================ ================== 6 28 95.8 32 CTTCACTGCTGTATAGGCAGCTAAGAAA # Left flank : GCGCCAGCAACTCGCCGACGCCGTCGAACACCCGGTTCTCGTACAACCCGGTGTCCTTGAAGCGCATCCGGTAATGGTTCACCGCCTCCCAGGCCCGCGCCTCGTCGAAGCCATAGGTGCTCATGAAGCACTGCAGCAGCGGCGGGCCGATGAAGTGTTCGAGCCGGCGCAGGTCCGGCTCGTCGATGCCCAACTGCGCCAGGGCATACTGGATCGAACGGGTGATGCCCTCGCGCGGGTCGGTGAGGGTGCCGTCGAGGTCGAAGAGGATGTTCTGGTAGTGCATGGGCAAGGCTGCGACAGGAAGAATCGAACCGGAAGCATACAACTGGCCTCCGTACCGACCAAACGCCCATGCAATGACTTCCTGCCCTTTTTCTGGAGCCTCTTGCGAGTCCCATGAAAATCAATGGTTTGGAGAGGCCCCTGAAAAAAGGGTTATGCGTGTGTATAGGGTGCTTTCTCGTGGGAAGTCAGGGGGGTGAGGAGTAACATCTCTA # Right flank : GCACCGGACACTCGGAAGAGCATTCCTGCGCGCCTCATTGCCGTACAAACAGACCGGCGCCCAGTCGTCTCCGCGCCGCCTGTTGCCTTATTCGGCATAGCCCTCGGCGATGTGCTGGTCCTTCAGCTTCACGTAGTTGCCGGCCGTATAGGCGAAGAAGGACCTTTCCTTGTCGCTCAGCGGGCGGGCCTTCTTCGCCGGGCTGCCGACGTAGAGGAAGCCGCTCTCCAGCACCTTGCCCGGCGGCACCAGGCTGCCGGCGCCGAGGATGACTTCGTCCTCTATCACCGCGCCGTCCATGACGATGCAGCCCATGCCCACCAGCACGCGGTTGCCGACGCTGCAGCCGTGCAGCAGGACCTTGTGGCCGACGGTCACTTCGTCGCCGATGGTCAGCGGGAAGCCGTCGGGGTTGTAGGGGCCGGCGTGGGTGATGTGCAGCACGCTGCCGTCCTGGATGCTGGTCCGGTTGCCGATGCGGATGCGGTGCATGTCGCCGC # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCTGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched CTTCACTGCCGTATAGGCAGCTAAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.80,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //