Array 1 25799-27002 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRIN01000035.1 Prevotella copri strain AM22-1 AM22-1.Scaf35, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 25799 37 100.0 34 ..................................... AATGGGAGCAAGGCTTATTCAGCCCTGCAATCCC 25870 37 100.0 36 ..................................... GTTCAACTTATTTATTTCACAATTATCCTCTTTGTG 25943 37 100.0 35 ..................................... AGACTGACCTCTTACTTTGAGGAACTCAGCAACTG 26015 37 100.0 36 ..................................... GCAGTAACTGGGTCAGTAGCCATCATCATAAACGCA 26088 37 100.0 37 ..................................... AAGTTTTACACACTTACTCTCAGATACTACGTCACTA 26162 37 100.0 36 ..................................... ATAGCGTTCACAAAGTGAACAAACTGACTCATTGTG 26235 37 100.0 37 ..................................... TCACAAATATTCATTGCTAAATAATTATTCATAATAA 26309 37 100.0 35 ..................................... TTACGGAGTTTAGTTCTACGACACTTATCAGCAGA 26381 37 100.0 37 ..................................... ATTGATGGCATTACATGGATTAAGGCACCATTTGCTG 26455 37 100.0 35 ..................................... ACTTGTAACCGGCTAAGCTAGGTTTAATCAAGTTA 26527 37 100.0 35 ..................................... AACTATAATGTTTGGAGTTGTATTCCCAATATATT 26599 37 100.0 37 ..................................... CTCATGCATGATAAGCATGTGATTGCCATCCTGCATT 26673 37 100.0 37 ..................................... AACAGTCTCAATGAAATTGTTGTTTGAACTCTGTGAA 26747 37 100.0 35 ..................................... CTTTATTGCGTGCTTTAATAGTTTTTTCAAGAACA 26819 37 100.0 37 ..................................... ACTTTCTTGAGTTCAGCACTCACTGTTTCAAAACTTT 26893 37 100.0 36 ..................................... AAATAAACGATACTTTGACATAATTATATATAATTA 26966 37 89.2 0 .......G.........................TTC. | ========== ====== ====== ====== ===================================== ===================================== ================== 17 37 99.4 36 GTACTAGACTATTGTCCATTACAACAAGGATTAAGAC # Left flank : CACTCACTCAATTTTCCCTTTTGCTACTTTCTTTTGCTTTATATTGTTTTGTAATGAATGGATTCAATGATGTCGCTAACAACTTAACCATAGCGGCTTTGGTTTTTCTGGGTGCAAAGGTAGGGGAACATAGTGAAATGATATTTCACTGGCTCATTTTCCTCAATTTTAGTTAGTTGTGGGTGCTTGCTATACCTTATTATATATGTGGTGAGATAGTTTTTGGTAGATAGATTTGTTGATTTATGGTTTTACGGTTGTGTTGTTTATTCTTATGTCGTAGAGTGCTTTTGGGATACCTTTGTGCTTATTGTTAATAGAATAAAATTCTGATGCATAAAATACCAAAAAAATTAAGAATAATTGGCTTGCATATCTCAAAAAAAAGTAGTACCTTTGCACCCACTAAGGAAATAGTTAATTTCCTGTTAATGAAAATAAATATTTGTTTAGCTTAGTTCTTTAACTTATTGATAATCAGTGTTGTCTTATTAGGTCGA # Right flank : CTGCCGTATAGTTCCTATGTTTCTTGATGTTGCTGTTTTTTCTACTAAATACATTGATGAATTGATATAACCCATAAATAGAAATGCAGACAGTAACAAAAGATTAACGCTTCAATGTGTTGGAATTTCAAAGGAAGTTGTATCTTTCAGGCGTAAAATGTAAGATAGCGCTAGAGGACAAAGCTACGTTTCTACTTTGTTCACCAACGTTTTCAATGTTAGTTGGATATTTACAATAATTGAGATTGTGTAGCAGTGCCTTGATTAATGGGGGAAGTTTTAGGTATGCTAACTTTTGAGCAGTCTCTCCTTAAGGAATACCTAAATGTGGTATTCCCTAGGAGTAGACCTTATCAGTTCTTAGATAGTTAAGGATAGGACGAAAATGCTTTATTTGACATTTTTTTATTTGAAAAATCATGGAGTCTTTTGCCGATGATGCAGTCTCAGTTTTGTTTTCCTACCTTTAGCGGATGTGATACATTGTGTGGATTTTCTAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTAGACTATTGTCCATTACAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 32308-35189 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRIN01000035.1 Prevotella copri strain AM22-1 AM22-1.Scaf35, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 32308 37 100.0 38 ..................................... ACTTTAATCTTTGTAGCTCTAGTATGATAAGTCACACC 32383 37 100.0 37 ..................................... CTGACAGTACAGTTACTGTCTGCGCTGCCTGACCTGT 32457 37 100.0 35 ..................................... ATTTTATAATAAGTTTGTAACTAATATAAGAAACT 32529 37 100.0 37 ..................................... CAACTGAACTGCGCTCATAGCACTGTGCTTTACAGTA 32603 37 100.0 34 ..................................... TAGCTGGTGCACCTGGAGCCTGTTGAGCTGGAGG 32674 37 100.0 37 ..................................... TTTTATAATAAGTTTGGAATTAATAAAACAAACTAGT 32748 37 100.0 37 ..................................... TTTACGCGCATAACACGATGAGCACCAGCAGAATACT 32822 37 100.0 36 ..................................... GAGCATTGCTTTCAACATTAACACGAACTTGAGCGG 32895 37 100.0 35 ..................................... ATCCATATTAACGTAAACTCTTGCGAGTTGTAGTC 32967 37 100.0 36 ..................................... AAGCATTGCTTTCAACATTAACACGAACTTGAGCGA 33040 37 100.0 35 ..................................... ATCCATATTAACGTAAACTCTTGCGAGTTGTAGTC 33112 37 100.0 38 ..................................... AGCACTACGCTCAGTCTGCTCAATATCAACTTTAGCAC 33187 37 100.0 39 ..................................... AAAACTAACTTGAAGTCTGTAGGAAGGCTGTCAGGATAA 33263 37 100.0 37 ..................................... AGACTTAGTATAAAGCCTTGTCTCGTACTTGCACATA 33337 37 100.0 36 ..................................... TAATAAGTGTTTAAATTAATAAAACTAGCATAAGCT 33410 37 100.0 37 ..................................... TTCTGAACTGTCAAATTAAGATTCATTGATTTCATAA 33484 37 100.0 35 ..................................... TTCTTAATGATGCCAAGCAGAACACGAGTGTACAA 33556 37 100.0 34 ..................................... ACAGTATAGTCCTTTGTTTTATCGAACTTCTCAT 33627 37 100.0 37 ..................................... TTTCTCTGCTTTTTTGTTTTTACCTGTATGGTAATTT 33701 37 100.0 37 ..................................... TATGTGTTCCGTCATTGATAGCTTTTTCCTTGCCGTC 33775 37 100.0 36 ..................................... CAATGTGCACAAGATTGTTCAAATGGGTAATACCAT 33848 37 100.0 35 ..................................... CAGTCATCTGGGTTTTCAAGAGTAAGCTTTACACA 33920 37 100.0 35 ..................................... TTCTTGCACCATCAACACCATCAATTAACACGTTA 33992 37 100.0 37 ..................................... CAGGCAAAGAAGCACATTGTGGCACCACTCTTATGTG 34066 37 100.0 34 ..................................... GAACTACATTGATAGTTGCACCATTTGCTGCACT 34137 37 100.0 35 ..................................... AATTAGCCACTCTAGCAAGACCTCAACCAACACGC 34209 37 100.0 34 ..................................... CTATTCCAAAGAAGAACAGCATTGATACAATACA 34280 37 100.0 37 ..................................... TATGGAGCTCGTCGTTGGGTGTGGAGAACGCAACAAA 34354 37 100.0 36 ..................................... AAATTCACCCTTTGAGTTAAAGGTGGCAATGTCGTC 34427 37 100.0 37 ..................................... TTATCTGGGAATGCCACCAACAAGTTGTCGATGGACA 34501 37 100.0 37 ..................................... ATCAACACCATCTATGAGTACATTAGCCATCACAGCC 34575 37 94.6 36 .....A.........................A..... TTGACATCGCCATTTTTACCAACTGAAATTGCTGAC 34648 37 89.2 37 ....TA......TG....................... TCAATGACCATGAATTCATAGTCATTACCGTTGAATG 34722 37 91.9 34 .....A......TG....................... AGCCCTTCGATGGTGATACCTGATGCTGACAGCA 34793 37 83.8 36 .....A......TG....T.....C.......G.... CTATTGTTGCCTTGCTCATGCATGATGAGCATATGG 34866 37 81.1 35 ....AA......TG....T.....C.......G.... CCTATTACGAAACCATTTCCACTTTCTTGACGTTC 34938 37 94.6 35 .....A..................C............ TCATCAGGAGCGTAGCTAATTACTCTTGTACCATT 35010 37 83.8 36 .....A.G....TG..........C.........A.. AGACGCATGTTCTCACTACCATTTGCAGCCTTTACC 35083 37 91.9 35 ....TA............................T.. AACACATCACCCTTCTTCCAAGCGAACTTAGACCA 35155 35 78.4 0 .....C.......G..G.T...--.........T..T | ========== ====== ====== ====== ===================================== ======================================= ================== 40 37 97.2 36 GTACGTGACCATCTTCCACTACAATAAGGATTAAGAC # Left flank : TCTCCATATGTTTATGGTTTTGATTTACGGGTGCAAAGATAAATCGGGATTTTGAATTTGTATTTCACTGGGTCAATTTTCTCGGATTTTGTTGGTTAGAGGTTGATTTTTACACCTTTTATATGGGATATGGATTATTCGTTCATCACTTTTCTTGTTGTCGTTAGAATCTTTAATGGAGGGGAGTAATGGATATGTAGGATTCATGGTTAATGGTAGGAGATAGCCTTCTTTTTCTGAAGTTTGTTAGTGCTGAATGGTGGGGTGGTGGGTGGTCTTGTCGTTTGCCTTTAGGTTTCTGTCTCCCTATTTGGTTAACAGAGTTAAATTTTGGGGATAAAAATGGCTAAATATTTAAGAATAATTGGCTTGCATATCTCGAAAAAAAGTCGTACCTTTGCACTCGCTAAGAAATAGTTAATTTTCGGTTAAGGAAAGTGAATATTTGTTTAGTGAAGTTCTTTAACTTATTGATAATCAGTAAAGTCTTATAAGGTCGA # Right flank : TTATTTGTTTGTGAGTTGTTCATAGATTATTTTGTTTCATAGGTAGGGTTAATCGTTGCATGAAAAAATCCCATATCAAGGTTGGTGCCCTTGGTATGGGATTGATATTAATATTCTTAAGCAGGAGCTTCTTTTTTCTTACTTCTGGTAGGAATCATAGAGTTCCTTGGTCTTGTCTTCACCCAGGAAACCGGACAGCTTTTTCCAGATTCCACTCTTGTCAAATGGCTTGGCAAGTTCCTTCACTTCCTTCTTGGATGGATCCTGTAGCAAGCGGGTTGAGGTATTGTAGAGGGCGTTGCTGTCGGATTCGTTGAGCTGTGATGCCTTGAAGTCTTTCAGCCATTTTTCCACCTTCTGGAAGCATACCTTGAAGTCCTTGATACTATAGTTTACGCCATCTCCTGCGAGTTTATCAAGGGTGGTGCCAAGACCAGCAGCATGTTCCTTTTCTTTAGCTTCCTGGGCAGCCTGTGCTGCTTGTTGCTTTTTCTCTTCTT # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACGTGACCATCTTCCACTACAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-40] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //