Array 1 49172-45679 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIWF01000009.1 Campylobacter sp. RM9328 contig00013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 49171 30 100.0 35 .............................. CGTTTTTTTCCATCTGTTTTACTACTAGTTTTGCT 49106 30 100.0 37 .............................. GCTCGACTTGCACCGTATTATCGCCCGCGTTAAATTT 49039 30 100.0 35 .............................. TCGCCACACTGTATTGTGACTGACACAAGGTCATT 48974 30 100.0 34 .............................. AATTTGCTCCTCGCTTCGTTTTTCATGCTACTAT 48910 30 100.0 37 .............................. AAGCGACTAAACGCACGCTTGGCCGCGCCGTCATCTT 48843 30 100.0 36 .............................. CTTGGATACTGTATATCCAAAATCTACCTTGATTTA 48777 30 100.0 33 .............................. ACGCTGCCCCAAAAGTGCAGATAACCATACTAA 48714 30 100.0 36 .............................. CAGATAATGGAGTAGGAAATTATACAATTAACTTTA 48648 30 100.0 35 .............................. CTACCTTTGGTGGCATAAAAACAACTTTTTGATTG 48583 30 100.0 35 .............................. AAAGGAGAAAACTTGAAAACTTCGTTTTTGTTTAG 48518 30 100.0 35 .............................. ATTCAATATCCGGGTAGAAGCTGTTAGCCGAAATA 48453 30 100.0 34 .............................. ATTTTAGTGTCGTCCTGCTCGTCGTCAAACCAAA 48389 30 100.0 34 .............................. ATATCCTATCGCAAGCCATCTAGCCGAGGTTACA 48325 30 100.0 35 .............................. TCTTGGATTTGGTAGATACGAACACATAGGCGAAG 48260 30 100.0 36 .............................. TTTCCATTAGAAATAACTGTTGCTTGCACTCTTGAC 48194 30 100.0 37 .............................. TTCAAACTCATTTAGAGGTAGGCGGACTAAAAGTCAA 48127 30 100.0 35 .............................. AGATAGTTTACGAACACTGTAAGCGCTTAAGTGGC 48062 30 100.0 35 .............................. TTGTTACGAAGTCTAGTGGCGGAATCTCACGTTCT 47997 30 100.0 36 .............................. TTTTCTTCTGAAAATCTTTTGTCTTGGCAAAATCTG 47931 30 100.0 36 .............................. TTTGCTATTTGTGCCGTAGGGTCATTCAAAATACTG 47865 30 100.0 36 .............................. AATTCTAACATAATCGTGTTATCACTTCAACTCTTG 47799 30 100.0 35 .............................. TTTTCGGAGTCTTTTTCAGAAGCTGTGTATGTTGC 47734 30 100.0 35 .............................. ATTCACAATGTCAAAAAGAATTTAAATTCAAAAGA 47669 30 100.0 36 .............................. TATCCAATATCAACAACACAAACCAAGCCATCTTGT 47603 30 100.0 36 .............................. GTATGTGATGGCAGAAGCTTAGCAAAGTCAGACTAT 47537 30 100.0 35 .............................. AAATATTGTTTCAAAGTCGATATTAAAACAGCCTA 47472 30 100.0 34 .............................. CCGTCGGAAAACGTCTTTATCTCACCGCCGTCGA 47408 30 100.0 34 .............................. TGACGTAGTAGATTATCTTGGATTTGGGAGATAC 47344 30 100.0 34 .............................. TGCTAAATTTGTATATTTTGGAACAAAACCGCAT 47280 30 100.0 34 .............................. TAACACAATATAAAGAAATCGCTATGCCTATTAA 47216 30 100.0 34 .............................. CTCTTCCTGCTAAACCTGTATATGACCCCTCTAA 47152 30 100.0 34 .............................. AATTCGACCCTGTAAGTGAATATCTAATAAAGGG 47088 30 100.0 35 .............................. ATGGTAAATTCATTGATTTGAGCCGTTGCTTGACC 47023 30 100.0 36 .............................. ATTGTGCTAACTTTCCACTGGCTATTTGTATCTTGC 46957 30 100.0 36 .............................. AAAAGACAGACAAAAGACTAGAGGTTATGGGCAACC 46891 30 100.0 35 .............................. AAGCTTGAGCTTATGCGGCTAGCTTCTACTCCGCT 46826 30 100.0 38 .............................. GCCCGAGCATTCGCGCTAGGCGATCGGGTTCTGTTTGT 46758 30 100.0 35 .............................. CAAAACGGATAAAATCCGCAAAGCTCCAGCCCGTG 46693 30 100.0 35 .............................. AAACTTGGTATCGATGAGATGTTTGAAGACCTTAC 46628 30 96.7 36 A............................. AATTTAGTGTTGGCAAAAATGCCTCGCCGATCGTGA 46562 30 100.0 36 .............................. ACTTTTTGTTGGTAAAACAAACTATGAAAAAACTTG 46496 30 100.0 37 .............................. TGGTTGTATCAATAATATCTACTGCTAGTGCATAAGA 46429 30 100.0 35 .............................. AGGTCGGTATGCTTGCAAATGTTCTTGGCGTTTCA 46364 30 100.0 34 .............................. TTTTAGCCGTCGGTGCGCTAATGTTAGTAATCGA 46300 30 100.0 36 .............................. TTTATAAAAAGAGTGATGAAACTAGCAGGAGAGAAA 46234 30 100.0 34 .............................. CAAAGGGTCTTTTAAATAAATTTAAAAAAGGTGT 46170 30 100.0 36 .............................. TTTAAAAGTAGTCGCAAAAAACAACGACGCAAACTG 46104 30 100.0 35 .............................. AGCAAATTCAAAACAAAAATATTTCTACTCTAATT 46039 30 100.0 37 .............................. TCATTTGAAATAACCCATAATCTACTATTTAAATCAA 45972 30 100.0 37 .............................. ATGACGTCCTTTGGTACTGGGAGTTTAAAATGTCCGA 45905 30 100.0 38 .............................. TCGCCGCTAGAGCTTCATCGCTCATCACGCCGTTTTGC 45837 30 96.7 34 .............T................ ACCGCTAAGGGGCGTGGGCTAAAGCCAGTTAAAA 45773 30 100.0 35 .............................. GATTAAATACTGCTTAAGTAAATAAAAAGAGCGTA 45708 30 93.3 0 ............................TT | ========== ====== ====== ====== ============================== ====================================== ================== 54 30 99.8 35 GTTAAAATTTAAGCCGTTGGCTTTTGAAAC # Left flank : TGAGATTTATAAGACCGAGCTAGATCCAAGGATCGGCTTTTTACACGAGCCAAACTACCGTGCGCTTAGCTTGCATCTTGATATTGCTGAGATTTTTAAGCCGATTTTGGGCGATACGCTGATCTTTACAATACTAAATCGTCGTGAGATCACGGCAAAGGACTTTGAGACGAACGCCGGACGGATCAAATTTAGCAACGAAGCCGTGCAAAAGATCGAGATAAAGATAATCGGCAAGCTCACCGAGCAAGTAGAAATAGCGGGGCAAAAGCTCACGTGGAGGCAGGTGATCCGCCGAGAAGCCAATAGACTTAAAAAGTGTATTTGTGAGGACGCACCTTATGAGGGGTTTGTATGGAGATAAAGCTTGTTTTAAGCTTTATGATGACCCGATATTTTGGGCACTTGGCTGTTTGATGTGAGTAAAATTTAGCCTTTTATAAGGTAAATAGATATAGACTTTATCTTGCAAACAGCCCTAAAATGTGTGTTTTGGTGCT # Right flank : GAAATGAATGAAGGTAGGTAAGGTTGGAATTTGTTTTAAACGTAAAGGAGAAAGAAAATGCAAGACGTAAAACAACTCAAAGCTATGCTTGATAGATATGAAGCCTTGGCTAAAAAGATCACTAATGCAAAAGCTACACTAGTAGATCTTGAGAGTGAGATGGTAAAACTTGAAGAGAAAATAGGACCGATATTGTTAGTGGCGAGTCGAGTTAATGGCTTTAATTATTTTACGAAGCCTTAATTTGCCTTATTGTGTAAGATGAGCATAAAAAAGTTATTAATAGTTAGTTGTGCCCGCTCTTTTGTATCTTAATAAAGTTGCATGACTGTTATGGTGGCTAGTGGGTGATAAATGTGACATAAAGACAAAGAATGACAAATAAATCCCGGAGAGCTGTAGCTAAAACATGAGCTGCACACAAAAACGCATGACAGTTGAGACAATTACTTAAATACTTATCTTTTAAGTTATGGTAATTTAACCAAAATGTTAGCTAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTAAGCCGTTGGCTTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.40,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //