Array 1 454715-455414 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016825.1 Streptomyces albus strain BK3-25 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 454715 29 100.0 32 ............................. ACGACGCGGACGGCATCGGCACCCTGGAGTGG 454776 29 100.0 32 ............................. GCCGAACGGAAGCGTTGCTCGTGACGAGAGTA 454837 29 100.0 32 ............................. GTGTTCGGTCTCCTCCCGAGCAGCTTCGGCAC 454898 29 100.0 32 ............................. TTGAAGGTTGGCGTACGAGTGGTTGTCCCCTC 454959 29 100.0 32 ............................. GACTCCATGTCGGGGCCGTCCTCGCCGTCGCT 455020 29 100.0 32 ............................. GCGGCGCGCAGGAGGCGGTCTGCCTCGGTGGT 455081 29 100.0 32 ............................. GAGCCCAAGGGCGGCAAGGGCAAGATCCGCAA 455142 29 96.6 32 ............T................ AGCTGCGGCCACCCGAGCCCTACGGCGGTGAT 455203 29 96.6 32 ............T................ CCCAAGAACGCCGATGCGAGCGCGACCACCAC 455264 29 96.6 32 ............T................ TTCTGCCAGTGGGGGTGGAGCGTGAGGCGTGC 455325 29 100.0 32 ............................. GAGGGGCTGCGGCACGGCATGCTTTCGGTGGG 455386 29 89.7 0 .....................AC.....C | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.3 32 GTTTTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : GCGGCCCCTTGCCCGAACCGCCGTCCTCCCGGCCGGTGTTGGAGCCGCAGGCGGTCAGCAGGCCGAGGGCCGTACCGGTGGCGAGCATCCTTCTGCGGCTGATGGTCATGAGCTGATCCCCCTGCGCTGATCTTCGATTGCTGCGGTGTCGGGCCCAACGATCAACCATGCAAGCGGATTACGACAGGGGTATTGCGGCCGCATGTCACCCCACCTGGGGAGCGGGCTCGGGGCGATGCCCGGGATGCCGCCGCTTTGCCGTTCCTGTCCCCCGACCGCGAGCCTGCCGCCCATCGTCCACGCGAACAGGCCGCGACAACCACCGAGCAACTGCACACCCCTGCCGACGCGCCCCGGCAGCGCAAGCCGATCGGATCATTCCCGCTCCCGGAAGGGCTGCCTCACCTACAGTGCAGACCGTGCGTACTGGTCACCCGCTGCCCGGCATCACGCCTGGCAATGAAATGGCAAAGCCCCTCTGACGTTGCAGGTCAGGAAGT # Right flank : CCACCCCCTCAGGCTCGGCGATGGCATGCCCGCCGGGAAGAGCCGGGCGCTGAACGGCGTACGAGGCCACCCACGGAAAGGTGCGCCCCTCTCCCCCGCCATTGCCCCGTTCGGGTGGTTGATCAGCGGACTTGAGCCGTGGGCCGAGTGCCCCCGCATGCCCCCGCCGACTCGGGGCACTCGTCGGTGACGTCCCCGAGTGGGACCCGGATGAGAGCCGAAACGAGAGCCGAGTGGGAAGAGAGGTAGCCCTGTGTCGCAGGTCGAGGAGTCCATCGAGGTCGGTGTCCCGGTCAGTGCCGCCTACAACCAGTGGACCCAGTTCGAGGACTTTCCCAAGTTCATGGACGGCGTCGAACGGATCGAGCAGCGCACTCCGACCCTGACCCACTGGAAGACCAGGATCGCCGGTGTCGAGCGGGAGTTCGACGCGGAGGTCACCGAGCAGATCCCCGACGAGCGGGTCGCGTGGACCAGCGTCGGCGGCGAGGCCCGGCAGG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : GTTTTCTCCGCGTGAGCGGAGGTGAGCCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4060143-4059808 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016825.1 Streptomyces albus strain BK3-25 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 4060142 28 92.9 33 ............CG.............. CCTGGGCGACCTGGGGACAGGACTCGGACAAGA 4060081 28 100.0 33 ............................ CCTGCGCCCACTGCGCATCGGAGAGCACGGGGT 4060020 28 100.0 33 ............................ TTGGGCCGGGAGATGGGGACGCAACCGGTCGGT 4059959 28 100.0 33 ............................ CTCGCCCCGGCTCGGGGACTGTCCGTCCACCCC 4059898 28 85.7 34 ..........T.CG...........C.. CTGGGACTGCGTGATGGAGGTTCCTGACCACCTG 4059836 28 67.9 0 ............CCCC.CC...AC.C.. | C [4059812] ========== ====== ====== ====== ============================ ================================== ================== 6 28 91.1 33 CTGCTCCCCGCGTATGCGGGGATGGTCC # Left flank : GTGGGAGGCGCGGTTCGTCGCTCAACTCGCTGCGCCCTCCGCCGAACTGATGGGCACCGGTTCCGGCGTCATCCTCCGCGACGTCGCCACCGGATCCCAGGCGTGGACCGAGCCGAAAGGCGCCGGGTGGATCGCGCACCAGCACGGACCACTCCGCCTCTGGGACCAGGTCGAAGACGCGCTCCTGGAATGGCAGAGGGCCGGAGCAGCCGACCTCACGGAGTTCGGCATGACAGCGACTCCCGAGTCCCAGACCGTGTGGATCGGCTCACCGCGGGGCCCCAGTTGGCAGCTTCCCGTCTGAGTCCACGGGTACTGTCCACCCTGTCGCTGCATCGGCGTCCGAACCCACTCATCGGTCGGGACGCTCTTCCAGGGGGCTGAAGCTCATGAAGGGACGCTCGGCGCCGGATGAGGGGTGAGTTTTGTCGGGTATACCGGTCTCGGTGAAAGCTGCTGACAGCGAGGGGGGAGCGGACTAAACGTCCAGGTCAGCTAGT # Right flank : CGACACCCGCCCCGGCGTCACCACTCCACCAGCACCGCCGCCCACGCCCTTCACGGTCGGTCGCCTCGTTGGCCAAAGCAGCCCGCTCAGCCCCCCAGCACCGCCCCCAGCACCCCCACCACTTCCCGCGCCCGCTCCTCCGGCAGGTTCAGTGGAGGGGCCAGCCGCAGGGTTGCCGGGCCGATGGTGTTGAGCAGGAGGCCGGCTTCCTGGGCGGTCGACTGGACTGCGGCGGCTGTCGGTTCGGTGAGTTCGATTGCCAACAGCAGTCCTGTGCCCCGGACTTCGCGTACCAGCGGATGCCGGGGCCCCTCGATGCCCTCCCGCAACACGGCACCCACCCGCCGCACTTGAGGAAGCAGCCCCTCGTTCTCGATGGTGTCCAGTACGGCGAGGGCGGCCGCGCACGACACCGGGTTGCCGCCGAAGGTGGAGCCGTGCTGGCCGGGGCCGAGGAGGCGGGCGGCTGCGCCGAAGGCGAGGGTGGCGCCGAGGGGGAG # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGTATGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGATGGTCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 4334234-4333411 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016825.1 Streptomyces albus strain BK3-25 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4334233 29 100.0 32 ............................. CGAGCGCCCGGCCTCGACCTGCTCGCGCTCGT 4334172 29 100.0 32 ............................. ACGACCTGTCAGGTCGGATCCTCGCCCTCGAG 4334111 29 100.0 32 ............................. TCCTCCAAAACGGGCCAGAAACCCATCAGTGC 4334050 29 100.0 32 ............................. CGCCCTTGTCCGAGACCTGGTTGACGGCCGTC 4333989 29 100.0 32 ............................. GCGCAGCTCGGCGCGGCCCGCCGGGAGGTGCG 4333928 29 100.0 32 ............................. TACCGCCCGGCACGGGGCGGCATCGCGGCCAC 4333867 29 100.0 32 ............................. AGTTAGGTACTCAACATGGAATTGCCATGGTC 4333806 29 100.0 32 ............................. ATCTGCGAGGGCCGGGCGAAGGACGATGGCCT 4333745 29 100.0 32 ............................. TCGCGGCGGCAGACGGGGCAGCGGGTGTCAGT 4333684 29 100.0 32 ............................. GGCTCATCCACCACGATGGGCACCGGGCAGTA 4333623 29 100.0 32 ............................. CGGGTGTTCGTCGTGATCGTCGGGCATGCCCG 4333562 29 100.0 32 ............................. ATCATGGTGAGATCGAGGGGCGGACCGGGGAT 4333501 29 93.1 33 ...G........T................ GGCCGTCGCGCGAGGCCGCCTGAGCGCGGGACA 4333439 29 82.8 0 ...TT.......TC............T.. | ========== ====== ====== ====== ============================= ================================= ================== 14 29 98.3 32 GTGCGCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CGCGGATCGTCCACGACATCCAGGACCTCCTGGACCCCGGCAGCAACCGCGAGGCCCCCGACCCGGAAGAAGAACTCGTCGACCTCTGGGACCCCGTCACCGGAGCTGTCCCCGGCGGCATAAACCACGCCGCCGACGGCTGAAGCCCCCTCCCGGGAAGGACCTGCCCCATGGCCTCCATGATCGTCATCTCGGCGACCGCCGTCCCCGACCACCTCAGAGGCGCCCTCACCCGCTGGCTCCTCGAAGTCACGCCCGAGCTCTACGTCGGCACCGTCTCCGCCCGGGTACGCGACGAACTCTGGCAGTCGGTCACCGCCTGCGCGGACCAGGGCACCGCGGTCCTCGCCTACCCCACCGACAACGAACAGGGCTTCGAACTCCGCACCGCGGGCCCACAACGCCGTACCCCCGTCGACTTCGACGGCCTGACCTTGATCGCCTTCGACCGACCGAGTCAAGAAATGGCAATGCCCCTCTGACGGCGCAGGTCAGGAAGG # Right flank : GGTCAGTCAGTGCCGTCTCGGTCAGGTCATCCGTTCTCTCTGCGGAAGCGGAGGTCATTGCCTGGGGGGCGTGTCTTCGGGAGCGAGTACGTCGGTTCTGCTCGTGGCCGGTCGAGCCGCGAGGACTTCTCGACGGCATCCGCCCGGCGGTCTCGCCACCCAGAAGCGCAGCAGTTTCTCCCGAGATTCTCCCAAACGATCTTTACCGGGGGTCGTTCACCGGTCTGGACTGGGGTGTTGGGCTTCCAAGTGACGGACGGCCATTGCTGGTAAGGATGAGGCCACAGGTTCACATCCTGTTGGAACCGCCAGTACGAAGACCCCCAGCCGATCATGGTTGGGGGTCTTTGGTATCTCGGGCCGAGATGAGGCAGCCGTCCGTGTCCGGGGCGTTCGGGTTGGCGTGTTGCTGTGCTTCAGGGGCGGAGGGCGTGCATTCCATGGGCTGGTTTTCCGGTACGGCGCGTCAGGAAAACCGTTGGAGGCGCGGCCGCCCCCGG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 4344012-4344162 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016825.1 Streptomyces albus strain BK3-25 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4344012 29 100.0 32 ............................. CGGAGAGCCCGACCGAGGGCGGTCGGGGGCTC 4344073 29 100.0 32 ............................. GTCGCCTTACTGCTGGCCTTCACCGGAGCCCT 4344134 29 96.6 0 ......C...................... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CGCTACATGCGCGTACTCGGGCTGCCCACCCACCACCTCGAACAAGGCGGGCACCTGCGCCTGAAAAGCAGGCGAGATCTTCCCCAGATCGTGCAACCCCGCCCAGAACGAGAGCACCGCCCGGCACTCCCGCCCCGACAGCCCCAACTGCCCGGCAAACCGCTCCCGGACCCGCCCCTCCAGCAACTCGTCCCAGAGCACACCGAACGTCGCCGCCACATCCAGCAGGTGACACATCACGGGGTAAGGCTCAACCAGCCCGTGCTCCTTGCCCCACAGCCGCCCGTCCGACAACACCACTGCCTGCGACGCATCTTGACTGTCAGTCATGACGCATGTCCTACCAGCCCGCACCGACAACGCGAGCCGATCAGGCCATTCCCTCCTGCCGCAGGGCCACGCCGCCTACAGTGCGCACCATGCGTACCGCCTACTCCCTGCCCCGCACTTCACCTGGCAATGAAATGGCAAAGCCCGTCTGACGCCGCAGGTCAGGAAGT # Right flank : GCCGCCCGTCCCTACGGTCGGTGGACGGATCCTGTGGAGCCGTCCGGCCCTCGACGAGCACGGCCCGCACACGCAGGTGGGCGTATACCGGGTCGTCCGCGAAGAACGCCGCACCGACCCGGGCCCGGGCGGGGAGTACATCCTGCTGGACCTGGAGTTCCTCCCCGACATCAGCCGCGAGCCAGAAGCTGCCGGGAGCCCGGCGCCCTGAGCCTCCGCCTGCTCGTACGGGGCGTTGTCAGGATGTGCCGATGGCGGGCCGGTCGGTGTCGGGGCAGTCGGCGGCGTAGCGGCAGGGGGAGGTCTTGGACGGGCAGCCACTCGGGTCCTGGTCGTCCTTGGAGCCGTTCGTTGTCAGGGTGACGGCGACGAGGGTGGTCTGCGGGGAGAGGTCATTGGTCCCGGTCAGTCGATGCCTTCGACGATACGGAAGTAGCGCTCGACGCCGTCGTCGAGGGCGGCCAGCGCCTGCTGGTAGTCCGCGCTCTCGCGCGCCGCGA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //