Array 1 1963824-1965230 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047639.1 Proteus sp. ZN5 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1963824 28 100.0 32 ............................ CAAGAACTTTAGATGATACTGATATAGCGAAA 1963884 28 100.0 32 ............................ TGACGGTGTAAAGAAATGACAGTGCCATATCC 1963944 28 100.0 32 ............................ AACTATTGCGTTAAGCCAGCTATCTCGTGATG 1964004 28 100.0 32 ............................ GACAACTTTTGCCATATCGTCAGCACCACCAA 1964064 28 100.0 32 ............................ ATTCATTAATTTCACTTTCAATAAAAGCAACA 1964124 28 100.0 32 ............................ ACGTTAGAACGTGTTAAATCATTTTATGTAGA 1964184 28 100.0 32 ............................ TCATGAACAGGATGATATTGATAGCTTCGCGT 1964244 28 100.0 32 ............................ GCCCACGGACGAGTTACAAACACACCTGCAGT 1964304 28 100.0 32 ............................ TCATATGCATCTTGACTGGCGCCACCAGCCAA 1964364 28 100.0 32 ............................ TCTTGCTCTCGCTGTTGCCGATGTGTTTCTTG 1964424 28 100.0 32 ............................ TGTTGCCGTCCACAAAACAGGTGCTAAAGGTA 1964484 28 100.0 32 ............................ ATTGTTAGCGAGATGAGGCTAATTTCTGTTGA 1964544 28 100.0 32 ............................ TGCAAGATAAACAACTTGGCAGAAAGATTGAC 1964604 28 100.0 32 ............................ AATAGAGCGCGTGACCACTGATGCTCTACCTG 1964664 28 100.0 32 ............................ ATAGCAGAAAGAGATGCTGCAGCAGTTCTTGC 1964724 28 100.0 32 ............................ ATACGATTAAGGCGCTGCTCTAACTGCTGTTG 1964784 28 100.0 32 ............................ GGTTAAGCCAGATGCGTGTTTGACTTGCAAAG 1964844 28 100.0 32 ............................ AGTTGCCACTTTATCCATATATTCAGGAAAGC 1964904 28 100.0 32 ............................ TACACTAAGAGAGTATCGGGCACAACGTCCAA 1964964 28 100.0 32 ............................ TTCGCCATCCCCTCTCTCCTTGATATTATCAA 1965024 28 100.0 32 ............................ ACAAGAATGGCCTGGCTTGGAGGCTGTATGAT 1965084 28 100.0 32 ............................ TTGTAACGGAACCGCTTTTTCTTGATATGAAA 1965144 28 96.4 32 ............G............... TACCGATTATGAGTCGGGTGCTCTAACCAACT 1965204 27 85.7 0 ....................-..TT..T | ========== ====== ====== ====== ============================ ================================ ================== 24 28 99.3 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : ACAAAATTTAGTCGGTACTATACATAAAAAAAATAAAGAGCAAGATATAACCTATTTAATGCAATTCTATCATCCATTCAAAGTTGAGTTTTACCAATATAAGCAGGATTTTTTTGGTCCAAGATCTGCTCGAGTATTACTGCCAGTAACATTAGCGTTAGATATCGTGACATTACCTTTGCAGTTTCTTTTTGTAGGGCATAGAAGGTAATTGATTAACTATTGTTGTAGTGGGAGCTTGCACCAACCTATAACGAGTTGAATTTGCAATTGAGTAATATCAGCATATTTTTTGCTATAGGTTGAATCAGAAAGAAAAAAGAAAGCTGATTGTTGTACCTTAGTTTTAATATAAATATTCAATGTTTAACCCTCTATTTTTTGCTCTTTAAAAATCACAATGAAAACATATGGTTATATTTTGGCATTTTTAATAAGGTAAAAATGGTTAAATGTAGCTAACAGCTTGCTTTAGCTCATTTTTTCGTGATAATGCTATT # Right flank : TATTTTTAATAATTAAATTTTCCTTAACAGTTCACATATATGCAATTTGCTTATGTCATGCTTACTTCTTAATTGATATTGTTTGGAGGTGACTAAAAGAGGCTAAAGTAATGGAAGATTTATCCCCCTCCGATTTGAAAACCATTCTTCATTCTAAAAGAGCCAATATGTATTACTTGGAATACTGCCGAGTGATGCAAAAAGATGGTCGTGTTTTATATCTCACAGAGTCGAAAAAAGAGAATCTCTACTTCAATATCCCTATTGCTAATACTACAGTCTTATTACTTGGTAATGGCACATCAATTACTCAAGCCGCAATGCGTATGCTTTCACAAGCCGGTGTGTTGGTAGGTTTTTGTGGTGGAGGTGGTACGCCACTGCATATGGCGACTGAGGTAGAGTGGTTTACTCCGCAAAGTGAGTATCGTCCGACTGAATATCTACAAGGCTGGCTTTCTTTTTGGTTTGATGATGAAAAACGGCTTGGAGTTGCTAAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1973864-1976173 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047639.1 Proteus sp. ZN5 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1973864 28 100.0 32 ............................ ATACGAAAAAGTAAGACCTGAGTTTTTATCTA 1973924 28 100.0 32 ............................ GTCTTGGATGAACAAGGGCGAACCCGCAAAAC 1973984 28 100.0 32 ............................ TTTGATGCACACAAATTATTCTGCAAATGGTT 1974044 28 100.0 32 ............................ CATCGGGTTATCTAAAATCTGTTCTGTATGCG 1974104 28 100.0 32 ............................ TAGGAGCATTCCCTGTAGTTTCAAGTGCAATG 1974164 28 100.0 33 ............................ AGAAGATTGGCAAGTATTAATCACCGATGTATT 1974225 28 100.0 32 ............................ GTTGATGCCTTGTAGTCAATCATTTCCTTTAT 1974285 28 100.0 32 ............................ TGCATGAATAATATCTTTCGCACCCTCAATTA 1974345 28 100.0 32 ............................ AAAACACCAATGTACGTGGGTAAAGGTGGTAA 1974405 28 100.0 32 ............................ ATCCAACATCATTTTTATCTTTTGCTCTTCTT 1974465 28 100.0 33 ............................ CACCAGCTCATCACGTCTTACATACAATTCAGA 1974526 28 100.0 32 ............................ CTCTGCCGACACATCCCCATTCACATAACCAT 1974586 28 100.0 32 ............................ AGTAAGGAAAATTCTATTAATGGATTTATACT 1974646 28 100.0 32 ............................ TGTTGATGGAACAAAACGAAAAATAGGTTCTA 1974706 28 100.0 32 ............................ AAGCACTATTCTTCGATACACTTCACTAAAGT 1974766 28 100.0 32 ............................ GCAACCCGGTTACATCATCGCTGTTGCTGATG 1974826 28 100.0 32 ............................ TGCACCCCTCGCACTCGTCCGACTATCTTAGA 1974886 28 100.0 32 ............................ AAAGTAATGAGCTGGCTCGTTCTGGTGCTAAT 1974946 28 100.0 32 ............................ ATTAGTATTGTTCTCAATTGGCGGTGCATACT 1975006 28 100.0 32 ............................ ATTATAAAATAGCATATACTCGATAAAATCAG 1975066 28 100.0 32 ............................ ATATCAGGTATCCACTGTAGCTAGTGCCCTTT 1975126 28 100.0 32 ............................ AACGGACGAGCATTTGCCCCATATCGGCAATT 1975186 28 100.0 32 ............................ TAACAGCGTTATAGTGATTGAAATGTAACTTT 1975246 28 100.0 32 ............................ GATTCCACATCACCAAAGCGTGGCGCCCATGA 1975306 28 100.0 32 ............................ CGAACGCTGTCGCTGTGCCGACTGCTGTAATT 1975366 28 100.0 32 ............................ AAGTGTACCGGCGTTTATATACCTCTCATGAT 1975426 28 100.0 32 ............................ TCAAGAGCTTTATCTCTTGCTCTTGAGCTTTC 1975486 28 100.0 32 ............................ ATTTATTAACTACGCTGTTAGAATGGATAGTT 1975546 28 100.0 32 ............................ ATATAGTGTAGATAGTGAAGACGTTGTATTAC 1975606 28 100.0 32 ............................ ATTGGCAAATGTAAGTAAGGTTTCGACAAATG 1975666 28 100.0 32 ............................ TAGTTAAAGATGTTGCAAATGAATTAGGTTCT 1975726 28 100.0 32 ............................ GTAACAGTTGTTCACATCAAGCATAATTAGTG 1975786 28 100.0 32 ............................ AACTAAATTCTGTGGCTAGCTCAGTATTAGGT 1975846 28 100.0 32 ............................ TTCAAGCGGAACACGAGCCGCAAGTGATAAGG 1975906 28 100.0 32 ............................ AAAAACGCCGCAAGCAATGCACAGACTGCGGC 1975966 28 100.0 32 ............................ ACGGTATTTAGTGCGCCAACTACGATTTTCAA 1976026 28 100.0 32 ............................ ATTCTTCCGCTTATATTGCTCATGATCATCGC 1976086 28 100.0 32 ............................ TCTCTCGCATTTCAGGCGTCATGCGTAGAGGG 1976146 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 39 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TGTTGAGGAATATGCCTGTTTTACGCGCCATAATCCTAAATCTCAACAGCGTCGCTTAAAGCAACTGGAACGCCGAACTTCCTACTTAGCACAAAAACATGGTGTTGATGAAGATACTATGCGAGTGGAACTTTTAGCATCAATTGAGCAAAAATCGGGTGAAAGTAAATTGCCATATATTAATGTACAAAGTTTATCAACACCTACTGAACCTCAATTGCGTCATAAATTTATGCTTTTTATTCAATGTAATAAGTCAAATTCGCAATTGGGTAATAGCAACACATTTTCTTGTTATGGGTTGAGCCAAAAAGAAAAAGGGAAGCAGACTTTTGTACCTTGGTTTTAGTCTAAGTAATCAATGGTGAAACCCTTTATTTTTTGCTCTTTAAAAATCGCAATAAAAACAACAAGCTATATGCAGGCATTTTTAATAAGGTAAAAAAGGTTAAACATTGCTAACGCCTTGCTGTAGCTTGTTTTTTCGTGATAATGCTATT # Right flank : AAACAGATTCACGTTTATTTAAACAGTGAACAACTTACTGATACTCTTGTTTCTTTTGAGTATTTTCTAATCTGCTTAACGAGGTGCCTATCAAGGTGCCTAAGATGATTGGATTTAATTAGGTGACATCAGATTGCGCAGGACATAAAAAAGCCCGCAACTCATTGAGTTAGCGGGCTTTTCAGTCTTCTTTGGACGTCCTTAGAAGATAATTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTTCTACATCCTCGGTACTACATGCTTAGTCTATCTTTAATTTCACTTACCCACTGCGGACAGACGCGCCATGAATAAGCTAGCTTGATTAAGTTTAACGCTTTGACCCCAAGCTAGGTCTCCACGCGATCTCTTTTGGGTTTGACCTCTCTTGATCCCCGTCTTAAGAGCGGAAGCTAGGGAGAGAGGGCTCTAAGCAGGTTATTAAGCTGCTAGTGCTTCGTACTGATTGTCGTTTGCGACTATCTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //