Array 1 342504-340553 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADEYE010000001.1 Burkholderia gladioli strain BCC1722, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 342503 28 100.0 32 ............................ TCAAGAGCCTGAAAGATGACGCCGATCGCTGC 342443 28 100.0 32 ............................ TGCAGAGCAGGCGTCGATCGATGGCCCGATCT 342383 28 100.0 32 ............................ CCCGCGAGCAGCCGGACTGCCGGAGGGGTGGA 342323 28 100.0 32 ............................ GTGATGACGCGCTTGTTGCCACACGAGTCGAG 342263 28 100.0 32 ............................ AGCCGAACACGAGCGCGATGTCGGCCATCGGG 342203 28 100.0 32 ............................ CACGAGAATGCCGATTTCATCGTTATCCGCGT 342143 28 100.0 32 ............................ TTCACGGTGCAGTCCTCGACGATGTACGCGAT 342083 28 100.0 32 ............................ ATCCACTTGGCCAGCTTCAACTTGCGGCTGAT 342023 28 100.0 32 ............................ AACGTGCCATCCGGTGCAACTTCGATCCCGAT 341963 28 100.0 33 ............................ CTTTCGACCGAGGCTAAACCGGGTTCCCTCCGC 341902 28 100.0 32 ............................ AAGGCGCGCGAGCTCGGCAACACGCAACCGGG 341842 28 100.0 32 ............................ AGAGCCGATCGCCGGGCTGGCCGAGCGGGCAA 341782 28 100.0 32 ............................ GTCGTCCATGCGTTGTGCGTGCGCTTCATCAG 341722 28 96.4 32 ..................G......... TTGCTCACCGCAGCGGTATCCGTACCCGACAT 341662 28 100.0 32 ............................ TGAACGAGTGCAGCCAGATCGCATGGGCCACT 341602 28 100.0 32 ............................ TTGTTGAAGAGGATCCGGATTCGGTCGGCGGC 341542 28 100.0 32 ............................ TCTGTCGGAGGGGCGCACCGACGGGCCGAAAT 341482 28 100.0 32 ............................ GCGTCTTTTTCACGGTTCCATCGAAAGCCGCG 341422 28 100.0 32 ............................ AGGAATGGGGCGGCACTTACCGAGGTGGCGAA 341362 28 100.0 32 ............................ AGTAGAAATCGGTCGGCACCGCGTTCGCGAGA 341302 28 100.0 32 ............................ TCACGATGATGCGCGATGCGCTGACCATCTTC 341242 28 100.0 32 ............................ GTCGGGGCATTCGACGTATTGGCAACCGTCGA 341182 28 100.0 32 ............................ ATCAGCGCGGGTGCGTTGGTGTTGCGGTCCTG 341122 28 100.0 32 ............................ ACAATCCGAGGGTGCCGTTCTCGTCGTCGTCC 341062 28 100.0 32 ............................ TTGCGCGTCAGGTCGCCCGTGGTCGCCGCGGC 341002 28 100.0 32 ............................ TGCATGGCATCCATCGCGGCCGCAAGCTCGCG 340942 28 100.0 32 ............................ GATCGTTCAGCGTCGGCGATCCGGCGCGCGCT 340882 28 100.0 32 ............................ TTCACGGGCACTTTCTGCCCGGTTTTTTCGTA 340822 28 100.0 32 ............................ TGCGTGAGCACCGATGTAGGTCTGCTCGCGCA A [340801] 340761 28 100.0 32 ............................ TCGGGATGCTCGAGGTCCATCGGCGCCAGGCG 340701 28 100.0 32 ............................ GCGCGTGGCCCTCGGATTGCGCGGCGTTCTTC 340641 28 100.0 32 ............................ GGCACTGCTGCTCGCGGGGAGGTGAGAGGTGC 340581 28 92.9 0 ...........A.C.............. | T [340557] ========== ====== ====== ====== ============================ ================================= ================== 33 28 99.7 32 GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCGACGCTGGCGCCCGTGCCGGACGGCGCGATGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTCTGCGGCGGCGACGGATGCAGCGCAAAGGGGAAACGGCCGAGCAGGCTGCCGCGCATATTCCCGATTCCGTCGAGCGTCGGCCTGATCTTCCGTATGTGCGTCTACGCAGCGCGAGCACGGGACAGGTGTTTTGCCTCTTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTTCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTACCCTGGTTTTAACCCTTTTCTTGGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAGAGGGTGGAAATTTGGGTGGTTTGCCCTTTCGCGGGTGTTTGTTGTTTGGAAACAAGGGGTTGGAGAGGGAAGGGGATA # Right flank : CTGCGATATGAAAGTCCGGCAGACAGGCAAGCTTTGCCTCCAGCGCGCGTGTTTTAAAATCGCAGCGCCAACGGCATCGTCACCGAAGTCGTTGATATGACGAGGCATCCTCGCCGACTGGCTCGAATACCGAGTCGTCCGCGATTCGCGCATGTTCGCACCCGATCGCGGCACCGGCAGCGCCACAAACCAGACAAGAGAGAGGACAACAGGCCGATGACATTCAATCGCAAGATGGCGCAGTGGACGGCAGCCGCATTGGCCATCACCTGCCTGCAGGTGACCAACGCGAACGCACAGACCTTGAACATACCGCTCGGCACGCCCGACGGATTCTCCGCATCATCGATCAAGAACGTGGGCCAGGACCGCTATTGCATCAGCGGCCGCGTGTACGACGACGCGGGGCCGAGCAATACGGCGATGGCCGTGCTGGTGGACGCCCGGCATCGTACCGTGTCGTGGAAGACCTCGATCCCGCATCCGCGCGACTACGCCGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //