Array 1 9863-4513 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAPJ01000480.1 Xanthomonas translucens pv. translucens DSM 18974, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 9862 31 100.0 34 ............................... CGCGTCTGCCGGGCGAACTCCGAAGTCATCGTGC 9797 31 100.0 34 ............................... CGCTTGTCCGCTAGCGCACCTTCCGAGAAGTAGG 9732 31 100.0 36 ............................... TGGTTGTCGTCCACCAGACGAAGCGTATCCGCAAGT 9665 31 100.0 34 ............................... TTAGCCGTCGATGTAGGGTGTCCGTATACGTTAC 9600 31 100.0 34 ............................... GGCAGTAACCTGCCGGGCGTGCGGCGCGATGCGC 9535 31 100.0 34 ............................... ATTTTAGAGCCTCCCGACAGTCAGAAACGAGCTT 9470 31 100.0 36 ............................... GCGCTCACAGTACACACACAAGGGATGCTGCATCAG 9403 31 100.0 34 ............................... CGCCGAGCGTTGACAAGGTCTCCAGGACCCGCCT 9338 31 100.0 35 ............................... TTTGCCGGCATTGGCGGGTGGTCACTCGCACTACA 9272 31 100.0 34 ............................... CGGAACCTTGGTCAATGCTCGCAGCGCCATGTCA 9207 31 100.0 35 ............................... TTCACTGCCACCTCGGCGCGCAAGCGCGCCGGGGC 9141 31 100.0 36 ............................... CAGATCAGTGAGTACAAGGTCGACCCAAGGCCCGAG 9074 31 100.0 35 ............................... TTCACGAAATCATCCTCGTTCTCGGTCGCGATCTC 9008 31 100.0 34 ............................... ACCGCTTCGGAGTACGCGGGGCGCAGCGAGCTAA 8943 31 100.0 34 ............................... CTACGTCCGGCAAGTACATATTCGCCTGCCGCGC 8878 31 100.0 35 ............................... TGTGGTCTTGCCTTCCGGGCCGACGGCGGCCACAC 8812 31 100.0 35 ............................... TCTTTGGCGGAGCCGTCGGCCAATACGGCGTCGGG 8746 31 100.0 33 ............................... ATTGCTCCGCTGTCGCAACAACGCGGCAATGTC 8682 31 100.0 34 ............................... TTAATCCGCGCGCCAACCAGTGCCACCACACCAA 8617 31 100.0 34 ............................... ATGCGCTGCGCTCCTGGTGGTCCTGGTGGAAATC 8552 31 100.0 35 ............................... CGTCGCTATGAAGCCGCGCAGGTCTACATCTTCGA 8486 31 100.0 35 ............................... TTGAGCGCTCTGGTGACTTTGCTTTAAACCGTAGG 8420 31 100.0 33 ............................... AAGTACCTCTGTGCGCTCGACAACCATTGCAAA 8356 31 100.0 35 ............................... GTACATCCTGACCCCAAGGAGCACGCCATCTCGCA 8290 31 100.0 35 ............................... TAGACCCGGCACTGCGTGTGAAGCTCTGGGCGCTT 8224 31 100.0 35 ............................... ATCATCACGGGCGGCAAGGACAACGATGCGTCGCT 8158 31 100.0 36 ............................... AGGTCGTCTGCAGCCTTGTAGAGCGGCGACTCGCGC 8091 31 100.0 35 ............................... CGGCATAGTTGCCCCGCAGCTGCACTGCAAGCGTC 8025 31 100.0 35 ............................... CAGCTCCCGCTCCGCTGCGCTCTGACGTGCTTCCT 7959 31 100.0 34 ............................... TTCGGTACCGCCAAGCGCGGGACTACTGCCGGGC 7894 31 100.0 34 ............................... GCACCAAAGCTGCCCGGGATGGTGTCACCGACCG 7829 31 100.0 35 ............................... ACCTTGACGCCGTGGCTGGTCCGAATCGAGCAGGG 7763 31 100.0 35 ............................... TGTACGAACACCCCGAGGACATGGTGGCTGACGGC 7697 31 100.0 35 ............................... CCGCTCATCCGCGTAGATATCCGTGCGGAGGTGGT 7631 31 100.0 33 ............................... TTGAGCGCTCTGGTGACTTTGCTTTAAACCGTA 7567 31 100.0 34 ............................... AGGGCACCGTGGAAGCCATCGAGAACCTGCCCAG 7502 31 100.0 33 ............................... TGGCTCGGCTGGTATCACTACCTGGCCGCACTC 7438 31 100.0 35 ............................... AGTACGTATGTGGGCGACGTAGGGCACGCGATGGT 7372 31 100.0 34 ............................... TCTTGTTCGGAGTCCATTGTCGCGGACTACCTGT 7307 31 100.0 35 ............................... CGCACCAGCGGCATGGGCGCGCAGGGTGTAGGCAC 7241 31 100.0 33 ............................... ACTGCACAGTAGCGTCGTCTTGCCCGCATCCGG 7177 31 100.0 35 ............................... CGTTCACGGCTGCACCTCACACCGCATGCTGAACC 7111 31 100.0 34 ............................... TTGCTTCGCTGCGTTTGTTTCTGCATATTCAAGG 7046 31 100.0 35 ............................... ATGTCATTCGTCTCTTTGTTGGGTTTGGGTCAGGC 6980 31 100.0 36 ............................... AACAACTTACGCACCCGGTAGGGTGCGTATGGTGTA 6913 31 100.0 36 ............................... CTATCGGTAGATCCGCGCAGATATGGGTTGTCCCAT 6846 31 100.0 35 ............................... TTCAACTCGCTACCCTTGGCCTTGCGGATGCGCTC 6780 31 100.0 33 ............................... CGTTGATACGTTCGTGCGGGGCAACAATTTCAG 6716 31 100.0 34 ............................... AGCAAATGACGGTGCAGTCCAACGATGCAGGGTC 6651 31 100.0 34 ............................... TTAAACTCACCCTGAGGCACACCGCTATGCAGTC 6586 31 100.0 34 ............................... CAGAACCGCAACTGCCGATCTGCAGCATTACACA 6521 31 100.0 37 ............................... TCGGGTTGCGCTACCCACCGCACCCTCACTTGCTGAC 6453 31 100.0 35 ............................... ACGCGCACGCGCTGCCCGGCGTAGAAATCGGCACG 6387 31 100.0 36 ............................... AGTTCGTGCTTGTTTGCCGTGCCGATCAACACGAAG 6320 31 100.0 34 ............................... TTGTTGCAGTCGCACGGCACGACGCTGGCCACCC 6255 31 100.0 36 ............................... CCGGCATCCGGTATCGTGCTGAACCCGGCTGATTGG 6188 31 100.0 33 ............................... TTCCGCGCCGCGTCCACCTCGGCCGCCTGCTTC 6124 31 100.0 34 ............................... TGCCCAGGACCCTCGACGTACAGCACCCCCAAAC 6059 31 100.0 34 ............................... TGCACGACGAGTTCCTGGCTCGGTGCCAGGACCA 5994 31 100.0 34 ............................... TTCAACAACTTCTCTGGCACTGCGATCTTGTCGG 5929 31 100.0 34 ............................... GGTCTTGCTGGCGTGCCAGTTGCTGGTTGAAGCA 5864 31 100.0 35 ............................... ATCGCGTCCAACGGCACGCCGAACACTTCGACGCG 5798 31 100.0 35 ............................... TGGTCCTGCCTGTTGGCGATCGTCATCTGCTGGGC 5732 31 100.0 35 ............................... CATGAGGACCCGAGAAGTAGCGCCTACTGCCACCG 5666 31 100.0 34 ............................... CTGATTCGCCCGAAGCTTACCCTTACCACTCACG 5601 31 100.0 33 ............................... TCGCTCGGCTTGGGTCCGCTGGCACTGGCCGTC 5537 31 100.0 37 ............................... TTGAGCCCCACGATCGCCTCGGCGGTGCGTGTGAAAG 5469 31 100.0 35 ............................... TCCGGCGAGGACGCCGACGGCCTCGGCGACCGGGG 5403 31 100.0 35 ............................... TTGAGCCCGACCGCCTGCGCGGGGATTCTGCGCCG 5337 31 100.0 34 ............................... TCATCAAGCTGGCGGCAGAACTCGTTGTCGAAAT 5272 31 96.8 35 ..........T.................... CGCTGCCCGGTCGCCCTTAGCGCCGCCGTGTGGAG 5206 31 100.0 36 ............................... TGCTCTAGTCTGTCTTTATTTTTCAGGTATAAAAAG 5139 31 100.0 35 ............................... GTGGCCGCGCGGATGCCAGCCGCGAGCGGGTACAT 5073 31 100.0 35 ............................... AAATCTAGTTCACGCCGATGTGCCGGCGCTGCTGC 5007 31 100.0 34 ............................... AAAATCCCGCAGTTCGAACTGATTTACAGAAAGC 4942 31 100.0 36 ............................... TTGAGTTTCAGCTCTGCATCGACGGCCCGGATGCGG 4875 31 96.8 36 ....................C.......... CGCACGTTCGACGGCCCCAGGTGGAGGAACGCCCCG 4808 31 100.0 34 ............................... TGGAACAGCGAGAAGCACCACACTCGCATGAGGC 4743 31 96.8 34 ............G.................. AACCGTAGGTTGACTGGTTGGCCTGCCAAATAAA 4678 31 100.0 36 ............................... AGGAGGCGCTGTCGTCCACGATCCGCACCGCCAAGA 4611 31 87.1 33 ..............AT....C..G....... ATGTATTTGTTCGAAGAACATGTTCTTGCCGGT 4547 31 93.5 0 ...............C.........C..... | G,G,G,T [4517,4537,4539,4543] ========== ====== ====== ====== =============================== ===================================== ================== 82 31 99.6 35 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : ATGAAAAGGCCGCCGCGCCATGATGGTTCTGGTCAGCTACGATGTCAGCACGAGTTCCCCCGGCGGCGAAAAGCGACTGCGCAAAGTCGCTAAAGCCTGCCGTGATCTCGGCCAACGCGTGCAATTCTCGGTCTTCGAAATCGAGGTGGACCCTGCACAATGGGCCGCATTGCGGCAGCGCTTATGCGACCTGATCGATCCAGGCGTCGACAGCCTGCGCTTCTATCAGCTCGGCGCGAAATGGGAAGCCCGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTGGACCTCAAAGGCCCACTGATCTTCTGACGCGAACCGCAAGCGACCGGGGAAAGCCGGGCAGGTTCGCGCAACAAAACAAGTCATTGATTTACAAGAAAAAAACCAACCTCTTCCGCTCACTACAGGTCCGCGGCAGCCCAATTCGATTGCGTCTCCGAAGGGTTCCGCAAAAGTGCGGACTTTTTTCCAACACCCATCAGCACTTATGCTCAGGGCG # Right flank : TGGCTTGGCGACGATATGTCGTTCTATCGCCTTTGCCCACAAAAAAGGGCGCAGTCTCGCGACTGCACCCAGCGTGCCGCGCCGGCCGGGAGAGAGTCGGCTGGCGCGATCCGTGACTGCGGTGTGCTTAGCGGGACGCGAGGCGCATCACTTGACTTCGAATTCCTGCACGGTCCCGGCCGGCTGGCCGTTCACGGTGACCTCGGCCTTGTACTTGCCCGCCGGCCAGCCCTTGGCGTTGGTGAAGGAGATATTGGTGGTTTCCGCACCGGCCGTGGTCAGCGTCGCGCTCTGCTCGCCGGCGGTCTGGCCGTCCTGGAACAGCAGCTTGGCGCCGACATTGGTGGTGGTGGAGGAACCCTCGGTTTTCACCGAGACGATGATGGTGTCCTTGCTGCTCAGCGTGCTCAGCGGCGCCACCGTCTTGTCGGCGCCCGCACTGTTGCCCACGGTCACCGAGGCGACCGTCACCGTGCCGGCAGTGGCCGCGGCCGGCGCTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //