Array 1 176233-170393 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGTY01000001.1 Chromohalobacter salexigens strain 40a_TX Ga0227257_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 176232 33 100.0 37 ................................. ATGCGCACCCCCTTCCTGATGAGACCCCCACTCTAGC 176162 33 100.0 34 ................................. TCGTCGAGGTAGTCATATCGGTCGTAGTGACGGC 176095 33 100.0 34 ................................. AACGGCTGGATGCTCGCCCTGTCGCTCGCCGCCG 176028 33 100.0 36 ................................. TCGAGCGGGGGCACCGGGGTGTAGTCGTAGTCGATG 175959 33 100.0 33 ................................. CCTGTACAAGATCAAGGACAAGAACGGCAAGGT 175893 33 100.0 33 ................................. GGCTGAGTCATGGAATGCACCGAATTCTTCAAG 175827 33 100.0 34 ................................. ATCGCCAAGCAGATGGGGCACAAGGACTACTCGA 175760 33 100.0 35 ................................. GCTGTGCGTTGAATGCCATGATGTCGCTCCTTATG 175692 33 100.0 34 ................................. AAGTTCAACGCGCCGAGGCCGGCATTGCCGCCGT 175625 33 100.0 37 ................................. TGGTGATGAGCCCAGAGTTCACACGGGTACAGGCAGA 175555 33 100.0 35 ................................. ACCAGAGAAGAGGTTATCGGCGGTCGCGTTATTGC 175487 33 100.0 35 ................................. GCAAGCTCACCTGAGATGTAAACAGGCTTCGCACG 175419 33 100.0 34 ................................. CCTGATACGTCGGTTGCCTCAGTACATCGGGATA 175352 33 100.0 33 ................................. ATCGAGTTGACCCGGTCCTTAACAGGAGGGTTG 175286 33 100.0 34 ................................. GGCAACATCGGACCATTTCACAGTTTGCCACCTC 175219 33 100.0 34 ................................. CAATCGTTGTCGGGCAGATGACCCTCATTGCTCG 175152 33 100.0 36 ................................. TATGATCGGCAGGAGGCCTGGAAGATCGCCGAGGAT 175083 33 100.0 35 ................................. GGAGTGCATGCCGCTGGTCTTGGCATCCAATTCAG 175015 33 100.0 34 ................................. CACGACTCGCCGTTCATGTGGCGGCGAGGGTCTT 174948 33 100.0 35 ................................. TGGTGCTCGGTGCCGCCGGCGATGTACGTGCTCGG 174880 33 100.0 34 ................................. AGCGAGAACCTTTACTGACAAGAGCGCTCAGCAT 174813 33 100.0 35 ................................. GCTTAATCACTACGGACACCATTACGGACACCGAG 174745 33 100.0 35 ................................. CAGCTCATGACGGCATGGTCGTAGTCCTCGCTCAC 174677 33 100.0 34 ................................. CCTCACGCTGTTTCGGGTGCCGGTGGTGTCATTC 174610 33 100.0 39 ................................. TGGTGATGAGCCCAGAGTTCACACGGGTACAGGCAGACC 174538 33 100.0 34 ................................. TGCAGCTGCTATGATCTGCTCAGCATTGCGCAAC 174471 33 100.0 33 ................................. CGAAGCACTGGCTGAGCAGTGGGCAACGTCTAG 174405 33 100.0 36 ................................. ATGTCGTAGGCGCGAGACGGGATGTCCGAGCCGAAT 174336 33 100.0 37 ................................. ATGTCTTGGCCATCCTGCTGAAGAACGCAGGTCTCGG 174266 33 100.0 34 ................................. CAGAACGGCATGTTGATCGAACCGCCGCCAGATC 174199 33 100.0 35 ................................. GTTGCTCTCGGGCACGATGGCCCCGGCCTTCAGGC 174131 33 100.0 35 ................................. CGGTACCGCTTTGCCACTGCTCTCCCTTATCCCGG 174063 33 100.0 33 ................................. CTCGTGCCATCTGCGGGTCAAACCCTGGTGGCG 173997 33 100.0 34 ................................. TGCCGACCTCGGCCAGATGGACCGAGGACACCTC 173930 33 100.0 33 ................................. ACCGGCCAGGGCTTCCGCCTGACGGATCCGGGC 173864 33 100.0 36 ................................. CTGAAGCGCCCAAGCAATGCCGCGTTCGCCAAGCAG 173795 33 100.0 35 ................................. AGCTCATCGCGGAAGATGTAAAGGAGACCTGCACC 173727 33 100.0 35 ................................. CTCCTCGTGGGTGGTACCCGTTGGGTGCCTTATAA 173659 33 100.0 35 ................................. ATCGGCATGGACTTCAACGTCGGCAAGATGGCCGC 173591 33 100.0 35 ................................. ACGAGCAGGGACAGGAGCCGCGAATCCTTTATCGG 173523 33 100.0 33 ................................. CATCGCGCGGCGGTAGACCTGGCGCGCGGACAG 173457 33 100.0 35 ................................. ATGCGCACCGTGCGGGAGCTGCTGATCACAGGCCG 173389 33 100.0 34 ................................. ATTCGGCAACACTGCATCTGCCATGGGCAAAGAC 173322 33 100.0 34 ................................. ATATCGGCCGTCATGCCGCGCGTATTGCGCTCGA 173255 33 100.0 33 ................................. GCTTGCAGTGTCTGCCAGATATTGAGGCGGTGC 173189 33 100.0 34 ................................. CCCTGGAGGCCGAGGGGTTCGCCTGGGACAGCAA 173122 33 100.0 33 ................................. AGCTCCCCATTCTCACGGGTGGCAGAACGGATC 173056 33 100.0 35 ................................. TGGTACGCGAAGCTGATCTTGTTGCGGAAGATGTC 172988 33 100.0 34 ................................. AGGACGTGTGCAACGCCACGGCGCGCTCGCTGGT 172921 33 100.0 34 ................................. CGGTAGCACCACTGGCCAAGGAGCCTATGCCGTC 172854 33 100.0 36 ................................. CATCGCTGAACAGGGCCAACGGCCCGGCGCTGGGGT 172785 33 100.0 33 ................................. CGCCTGCTATGGGCCGGGGCCATCGACCTCAAG 172719 33 100.0 34 ................................. CTCGGCATGCTGCACCGTAGCGGCAAACAGCATC 172652 33 100.0 36 ................................. TGAAAGTCACCGCCGTGCGCATTGAGCGGCTGCAGG 172583 33 100.0 35 ................................. TTTCGCTCGGCTGCACGGTCCATTGCCTCTTGCAA 172515 33 100.0 34 ................................. ATCGTCGTCGACCGCCGCTACATTGCGGGTATGG 172448 33 100.0 33 ................................. TCAATCAGCGGCCCGCCCTGAGCCCAGTCGGTG 172382 33 100.0 33 ................................. CATTTCCCACACCCGCAGCTTGAGCACCATCGG 172316 33 100.0 35 ................................. TACCACACTGGTAATGCGCAACGTGGCCGTTCCAG 172248 33 100.0 37 ................................. CCGTTTGTCTGCATGTGCGATGACCTTCAAATCGGGT 172178 33 100.0 38 ................................. CATCGCCGGGGTGGCGTCGGCGCCTCGGCGACGCAGGG 172107 33 100.0 33 ................................. CTGGTCGGCGGCCATGGCCTTGGCCAACTCTGT 172041 33 100.0 35 ................................. TTGGTCCAAGACTCACGGCACTCCACGTAATAGGC 171973 33 100.0 35 ................................. AAGCCGGTCAAGATCGACCGCGAGAAGGGTAGCGC 171905 33 100.0 36 ................................. AAACAGGGCGGGGACGTGACGCGCGTCGAGGTCGAG 171836 33 100.0 35 ................................. TGGCTCGCCGCCACCAGCTTGCGAGAGATCGCGTC 171768 33 100.0 35 ................................. GCGACCGCCGACCGGCGTGGTCAGCACCTGGGTCG 171700 33 100.0 33 ................................. CAGGAAGAGACCAAGTTTCCTGTGCCAGCCCGG 171634 33 100.0 34 ................................. TCCTCCTCCGAGAAATGCAGCATGTAAGCGACAC 171567 33 100.0 34 ................................. TCCCGGCTGACAATCGTCACGCCGTGACCACGCA 171500 33 100.0 33 ................................. TTGAGCTGTGGGCAGGGCATCGCCGCGTCGCCC 171434 33 100.0 34 ................................. CTCCATGACCTGAATGCCTTCACCAAACCCCGTC 171367 33 100.0 35 ................................. GATTCATGGAGGCGCCTGATGCCATGGCGAAACGG 171299 33 100.0 34 ................................. ACCTGCGCCAAGGTGATTGCCCGTGACTACCCGG 171232 33 100.0 34 ................................. ATGTGGTAGCCAGCCAGGCCGTCCGAGTCTTGGA 171165 33 100.0 32 ................................. GGTCTCCGGGTCGGTGATGCCTGAGTGCTGAG 171100 33 100.0 33 ................................. TGGTCCGACAGATGCTGCATGCCATCTGTCATC 171034 33 100.0 33 ................................. ACGTCCGCCTCGGTCGCGGCCCAGGCCTGCGGG 170968 33 100.0 33 ................................. TGACGGTTGCGCGACAGGATGCGGCGCCATACA 170902 33 100.0 36 ................................. ATGACGCTCTCCTCGAAACGGTGGTGATCTTCGGGC 170833 33 100.0 36 ................................. GCCGTCTGGTGCGACATGCAGATCGACGCCCTGCTG 170764 33 100.0 34 ................................. GTTGTAAGTAAAGGCGGTGGTCATGATGCCTCCT 170697 33 100.0 36 ................................. CGGCGTCGAGGCGGCAGCCCGGAACGTCCTCGCCGC 170628 33 100.0 35 ................................. GATAGCCATGTCATTCTCCGTTACGCGCTGTGAGT 170560 33 100.0 35 ................................. AGAAACTCTCTCGGCAGGAGCTCAAGAGCGAGGCC 170492 33 100.0 35 ................................. ATGTTGTATTGGCTGTTCCTGATGGTATCCAGGAT 170424 32 87.9 0 ...........................-..TCT | ========== ====== ====== ====== ================================= ======================================= ================== 87 33 99.9 35 GTCGCGGCCCGCACGGGTCGCGCGGATAGAAAC # Left flank : GAAATAGACTGGGAGTTCTTCATGCTGGTATTGGTCAGCTACGATGTCAGCGTTACATCCGAGGGTGGCACACGGCGGCTACGACAGGTTTCGAAAGCCTGCCGCGATTTTGGGCAACGTGTACAGTTCTCGGTCTTTGAAATCGAAGTCGAGCCGGACCAGTGGACTCGATTGCGCCAGAGCCTGATCGACTTGATAGATGAAGAGGTCGATAGTCTGCGTTTCTATTTTCTCGGACGTAATTGGCAGAAGCGCATCGAACATATTGGCGCCAAGCCGGCTCTGGATATGAATGGTCCCCTCGTGTTCTGAAAGATCTTCCCTCTGCGAACCGCAAGTGTCCCGCTCTGTCCCGCCAGGTTCGCGGCTCTTTAAGAAGTTGATTCAATGGTACTTGAACGCTCTACGTATCTAACAACGGCCCGTAGGCTGCATATCAAGTATGGGTTCGCTGATTCACAGCGATTTTGTTTTAGCGCTCAATGAGTTATAAACGAGCA # Right flank : AGGCAAGACTTTTCCTAACCAGCCTGCTGGGCGAGGTCGTCGATGAAGCGCTGCCGCCAAGTCAGCAGGCTGTTGCGGCGCAGGACGTCGATCATCTCCCGGTAGCGCTGGCGACGTTCGTCGCGCGGCATGTTCAGGGCGCGTTCGATGGCGCTGGTGATGTCGTGCACGTCGTAGGGGTTGACCAGCAGGGCGCCGCTCAGTTCGCGGGCGGCGCCGGCCAGGTCGCTGAGCACCAGCACGCCGGGGTCGTCGGGGTCCTGGGCGGCGACGAACTCCTTGCAGACCAGGTTCATGCCGTCGCGCAGCGGAGTCACCAGGCCCACCCGTGCGGCCCGGAACAGGCCCATCAGGTCGGCGTGGGCGTAGGTCTGGTTGAGGTAGTGCACCGGCAGCCAGTCGATGTCGGCGTAGGTGCCGTTGATATGCCCGGCCATGCCTTCGAGCTGGCGGCGTAGCTCGTCGTACTCGGGGATCGCGCTGCGCGAGGGGCTGGCAAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGGCCCGCACGGGTCGCGCGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.60,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //