Array 1 15805-16663 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEDAM010000102.1 Candidatus Vampirococcus lugosii isolate Chiprana VAMP_178845, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =============================================== ================== 15805 35 100.0 41 ................................... AACCTCCTCCTTTTCAAACCCAAAATTATTAATAATTTCAA 15881 35 100.0 40 ................................... TCACTGTCTCAATCTGAAACAGCAAAATATAAGTCTTCCA 15956 35 100.0 35 ................................... TCATCAAGCTTTATTTCACTTACTTCAACACCTAA 16026 35 100.0 38 ................................... TCATTTTTTTTATTCATTACAATTTAAAATGTATAAAG 16099 35 100.0 43 ................................... TAACCTCCTCTCCGGAGATTATAAACCCTTTTATGCTTATTTC 16177 35 100.0 32 ................................... ATTTATGATAATCATGTTTGTTTATTTATTAA 16244 35 100.0 45 ................................... TTTATTCCTATTATCATATTTGTTTAATTAATATTTAAAACATAT 16324 35 100.0 47 ................................... CCAACATGTCGGAAGCGACCCTAAAGTAAAATAGAAGCTCTTCTATG 16406 35 100.0 41 ................................... ACGACACTCGTCAGAGTGTCTTCACTACTTATGTTTAACGT 16482 35 100.0 40 ................................... ATTACTGGCACTAATACTGGTAGTAAATCCCCAAGTATCC 16557 35 100.0 37 ................................... TCTGATATTGCAAAATGTAAGTCTTCTAAAAGCTTTG 16629 35 97.1 0 ..................................A | ========== ====== ====== ====== =================================== =============================================== ================== 12 35 99.8 40 GTAGACTAAAAGCTCGAAACTACGAGCATCGAAAC # Left flank : TTGACATGAAGAAGAATGAGTAGAAACAATAGAAGATTCTGAATGATGAATTCTTGGTACATTATTTTCTGTTATGATATATGTTTTATGATGAATAGTTTGATTATTTATCATATTAGTAATAATTTTTGCTATAAAAGCAAAATGACAATCTTGAAAATATAGAGATTGAGAAGATGAGGAAATTGAAGAAGATTATGAAGAAGAAGACAATGATTAATATAATAAAAACTAAATAAAATTATATTAATTTTTATTTTAAATAAATTTAAATAAAAAAACTTGCAAAATGAAAATAAATTATTATACTAATAAATAGTTTATTGTAGTAAATTTTAAGATGAGAAATAGTAAAAATATATGAAAATTTTCTCGGTACAGTTTAGAACTAGTGTTTCGTGCTATTAAAGATAGATTTTGAGAGAAAAAACAAAAAATTAAAAATTTTCTCGGAAACCTATCTCAGATAGTAGTTCTAAACTGGTCTTAAAATTGTATCG # Right flank : AATGAGCATTAAAAAAAATGGAGAATTTTATACTCTCCATTTTTTTGTATTAACAAAATTAAATTTTAAATTGCTTTTGTTTTTTTCCAATTTTCTGATTGTCTAGCTAATTTTGAAAAATCATTTTCATTATTTAATAAATATTTAATACTTTCTTCCATAAATATAGTATTTTGACTTCATTTAAAAACAAAAAAATTGTCTCAATTATTTTCTTCATTGAAATTATTCAAAGCTTTTCAAAGAGATATATAATCTTTAAATAAAAATATTTTATTTTCATCAAATCAAGATTTCAAAAGTTCATCATAAGTATAATTAGTAATTACATTTCATAATAAAAATATATAATCTGCTATAGTATTTATTTTACTAGCAAGTTTTCTATGTTCTGACTCTTCAAAATCTCATAATTCTCTCATATCTCATAATACAAGTACAAAATTTTTATTTGAAAAATTCTTTTTGTAAATAAAATAAGAGTTATTAATTACACTAAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGACTAAAAGCTCGAAACTACGAGCATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.50,-7.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 14130-15648 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEDAM010000012.1 Candidatus Vampirococcus lugosii isolate Chiprana VAMP_21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================== ================== 14130 35 100.0 36 ................................... AACAATTTTGATTTATAAACCATTATTTTTTTTTAA 14201 35 100.0 36 ................................... TCTCACTCCCAGATTGAAACCCAGGAGAAACTACTC 14272 35 100.0 43 ................................... ATAATCTCCTCTCCGGAGATTATAAACCCTTTTATTTCTATCA 14350 35 100.0 41 ................................... GGAGATTATAAAACTATTAATTCATATTATATTTTTTTTCA 14426 35 100.0 38 ................................... AGTATTCTTCAAGTTTAAATGAGCTTTTTCAGTTTTCT 14499 35 100.0 46 ................................... CCTCTTCTAATCAATCTGTTTCATTTATGATAATCATATGTTTATT 14580 35 100.0 36 ................................... TCAAACCCAAAATTATAAACAATTTCAAGTTCTTCT 14651 35 100.0 41 ................................... AATTTGAGGTTCATCAAATCCAAAATTGTTAATAATTTCAA 14727 35 100.0 40 ................................... TCAAGAATATCAGTGTTTAATTCAACTGAGCCAGTCCATA 14802 35 100.0 38 ................................... CCAAGACATCAAGCAATTGAGTGCCTTCAAGCACCCAA 14875 35 100.0 37 ................................... TATCTGCTGCGACTTCAAAATAAAACACTAATTCTCT 14947 35 100.0 43 ................................... TTCACAAGTCTCTAGCCGCTTCCAGCATGTCGGAAGCGACTTC 15025 35 100.0 39 ................................... TGACCTTTGATTTATAAATCATTTATTGTTTTTAATATA 15099 35 100.0 37 ................................... TCTCATACCCGATTTTCTTCAGGTATAAGAAAAAATA 15171 35 100.0 35 ................................... CCTCTTCGGAGATTATAAAACTTTTTATTTCTATC 15241 35 100.0 41 ................................... TCTGAAGAGGAGGTTATAAATCATTTTATAATTATCTCTTT 15317 35 100.0 38 ................................... AAATAACAACTCTTCAACCTCTTCTACACCATCATTCT 15390 35 100.0 42 ................................... CAAAAGCTTTCTTTATTAATTTCAAAGCTTTTTTTGTTCTTT 15467 35 100.0 38 ................................... TGGGGACACTTACTTTTATAAATCATTATTATATTTTT 15540 35 100.0 39 ................................... CGGTCTCGTCCAAAGACGAAGCCAATAGCTTAATGACTT 15614 35 97.1 0 ..................................A | ========== ====== ====== ====== =================================== ============================================== ================== 21 35 99.9 39 GTAGACTAAAAGCTCGAAATTACGAGCATCGAAAC # Left flank : ATGATTTTTTAGAATATTTCGATATAATGTAAGGTGTTCAAAACATGGAACATCGAATAATAATTGCCGAAACAAATTCAAATATTCAATCTTCTTCTGACATATAGCCTATAAGAAATAATAAAAAAAAATGTATTAGTAATATAACTATAATTATCATTGTATTTTTTGTTTTTATTAATTAAAAGTATAATAAAAATTATTATTTAAAATAAAAATTTATAATTCAATTATTGAAAAATACAAGAAATAATTTACTAAAATAAAAAAATAATAAAAAACTTGCAAAATAAAAATAAATTATTATACTGATAAATAGTCTATTGTGTGATGTATTTTATTAGAAAAATAATAAAAAATGTCAAAAATTTCTCGGCATAGTTTAGAACTGGTGTTTCGTGCTGTTGGAGATGAGTTTTGAGAGAAAAAACAAAAAATTAAAAATTTTCTCGGAAAGCTATCTCAGATAGTAGTTCTAAACTGGTCGTAAAATTGTATCG # Right flank : AAGATTAGATTAAATTTTACTTGACTTTTTTAAAAAAAAATGTATATACAATATACATTCAAAGCTAATTGTTATGGAGGCAAGAAATGTTTTACAAAAAGAAAGATGTTTATGATATTTACAATTCAATCCAAGAAGAGACATTTATACAAAAAATACTTTTTTATGTATTTGTAATAGTGTCTCTTATGGTTTTGTTTTGTGGGTTTTCTTTTTTGGTGTTTCTTACACACTTTATAATAAAAATATTTAATCATATGATTTTATCATAGATTAATAAGTATTACTCTCATGCGGATTTCCATGAGAGTTTTTTTAAATAAAAAATTAATTAAAAAAAATTAATTAAAAATATTAAATTAAATAATTTTTAATTAATCATAAAAAATCTCTAAATATTTTAAAACAAAAAAATAATTATTTATTATTTTTTAAATTATACTGTAATATTAAAAGGATTTACTCACCAAAACCTTGCTAAATCCAAAAAGATTATATAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGACTAAAAGCTCGAAATTACGAGCATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.50,-7.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 536-2761 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEDAM010000026.1 Candidatus Vampirococcus lugosii isolate Chiprana VAMP_48, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 536 36 100.0 27 .................................... TAATGTTGATGATTGCTGGACTCAGTT 599 36 100.0 26 .................................... TTATTAATATATAAAATAGCTATTAA 661 36 100.0 28 .................................... AATATTTTTTTGCTTTATTGCTCAAAAA 725 36 100.0 26 .................................... ATGGATGATGTTATTGATTTATTTGA 787 36 100.0 30 .................................... TATATCACTTACAAAAATGATTCATAAGCT 853 36 100.0 29 .................................... ATGTATTGAATAGAATATTAGAAGAGAGA 918 36 100.0 28 .................................... TTAACTATTAATATATATGATATGAAAG 982 36 100.0 29 .................................... TCATTATGCAACATTAAGTCAAATACAAG 1047 36 100.0 26 .................................... AATGCTGAATATAATCGTGGCATAGA 1109 36 100.0 30 .................................... AAACTATTTGGATAAAATGGGGCGAAGACA 1175 36 100.0 30 .................................... TTATTGAAGCTATATATTACACAAAACAGA 1241 36 100.0 29 .................................... TATCAAGTGTGATTTCTCACCTAGCTTTG 1306 36 100.0 27 .................................... ATATGATTCATCATAAAAATTTTTCTT 1369 36 100.0 28 .................................... TTGTGAATTTATGTGAAGCCGAGTTAAT 1433 36 100.0 28 .................................... CATAAATACACTATAGAGAATATTATTT 1497 36 100.0 27 .................................... ACTATATCAGATAGTATTGCAGAGTTA 1560 36 100.0 27 .................................... AAATAATTAATGATTTAATCAACTTAA 1623 36 100.0 30 .................................... TAATCAAAAGCATCCTAGTAACAGAAATAC 1689 36 100.0 27 .................................... ATTGACTACATTGTTGGGACTTAAATG 1752 36 100.0 29 .................................... CTGTATTAGTTAATTCAACATCTCAAACC 1817 36 100.0 30 .................................... CAGATGAACCCGCCCAGATACTGACCCAAT 1883 36 100.0 32 .................................... AAGAAAAAATACAAGTTCTTACAGAAGAGCTT 1951 36 100.0 27 .................................... TATAAGGTTGATGAAAGCGTCGCCAAA 2014 36 100.0 26 .................................... AATACTCCAGATATAAGAAACTATTA 2076 36 100.0 28 .................................... ATGTATTAACTGTATTAAAACAAGCAAG 2140 36 100.0 27 .................................... TCCTGTCGCATCTTGAAAAGTATAAAA 2203 36 100.0 27 .................................... CTTGGGACTGACATTTTGCATATTATA 2266 36 100.0 29 .................................... TTATGTTAATATTGGTGATGAGACAACAC 2331 36 100.0 30 .................................... TTTAGGCAATGTTGTTCAATCATTATAGTA 2397 36 100.0 32 .................................... ATATTATGATACAATATGTGAAATTTATTATT 2465 36 100.0 29 .................................... TCATAAAATAAGATAAATATGCTTGGTCA 2530 36 100.0 30 .................................... GTAACTCCAACTTTACAAGCTTTATGATAT 2596 36 100.0 29 .................................... AATTAAATTTAAAATGCCAAACTGGACAA 2661 36 100.0 29 .................................... TTTGAAAATTTGTTAGTCTTGAAACAATG 2726 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 35 36 100.0 28 ATCTACAAAAGTAGAAATATTATACGAATTATAAAG # Left flank : CCTGTTTTTTCATATATTTTCTCTGCTAAATATCATAAATCAAAATCATCTACAAAATCTTCTAAATTATATATTTTATCTTCTATATATATTTCTAATTTTTGTTTTATAAACTTTTCTATATCTTTAAATTCATTATAACTTGCAAAACTCATATACACTACTGGATTTATTTCTTCAAAATTTCGTTTATCATAAATATATGTATTTTTGAATAATTCTTTTTCTCACATATATAAATATTTTATCATTGATAATGTCAATGATTTCCCAAATCTTCTCGGTCTAGATAAAAAATAATATTTATTACTTATCAATAAATTATGTATTGTTTTAGTTTTATCTACATAGTAACTATTTCTTGTTATTAATTCTCTAAAATCTTGTATTCATATCGCTATTTTTTTCATTTCTCTATTTTTTTTTAACATTACTAAATCTCTTTCATTATAATTTTTTCTTTACCAAAATCAATATTTTTTTCCCGCCCGGGCGGTTCC # Right flank : GACCGATTTTGGCTTGTTTACTAGAGTTTCGGGAGCATACAGATTTTTATCCGAGCTTCCGAAACCCAGTTGGACCGCCAATCCATTTTTATAAAGACTATAGGTTTGCAATTTTTTATATTTTGCATATTATTCCATATAATCACACTTTACAATCCACATCGTTATTTCTATCTTTGTTTTTTTCTAATTCGTATTATTATATTTCATATAATATCTTTTAATGATCTTCTTATATAATTCGTATTTATTCATTATAATAATTTATTCTTATTTTGCAAACTTTTTTAATATAAATCTACATAAACAATAAATCACTTTCTTCATTTACTGCATATCAATATCTAATTACTTTCTTTTTACATCATTCACACATACCAAATATAAGAATACTATCAGTATTCTGAAATGATTTTGCAAAAATTTTTTCTACTTCTACCAAAATTAAATCTAAAATTCTTTGACTATTTTTGATCTCAAAAACTGAATATTGCAATCTC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTACAAAAGTAGAAATATTATACGAATTATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //