Array 1 157542-158403 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZRD01000017.1 Streptomyces sp. PTY087I2 A3Q37_contig000017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================================== ================== 157542 29 100.0 32 ............................. GGCACCGAGATGGAAGGCCTCGTCATGGAGGC 157603 29 96.6 32 ...................A......... AGCTCGGCACGCGCGTACCAGGTCGCCCCGTA 157664 29 100.0 32 ............................. GGGCCAGCTCCCCGTACCGAGGTGCCTCACCA 157725 29 100.0 33 ............................. TCCTTGGGAATCCACGAGGTGGAGTGCGAGACG 157787 29 100.0 32 ............................. GCGGTGAAGCGCCGCCGTACCGCCCGGTTCGG 157848 29 100.0 32 ............................. GGTACGAGCGTGCGTTGTCGGTGAGCTGCCCG 157909 29 100.0 32 ............................. TGCTCACGCTCGCCCGCACCGCCGCGCAGTCC 157970 29 100.0 32 ............................. CGGGTCCTCCTCCGGCGCGGGCTCGATCGCCG 158031 29 96.6 70 ............................T GAGGGGTCCTCATCGGGCGTGACCTGCGGCGTGTGGTCCCCGCGCTGAGCTCCCGCTCGGACGCGAACGG 158130 29 82.8 32 .....TT....C.........G....T.. TTCAGCTCGTTGAGAACGGCTGCGTACTCTGG G [158141] 158192 29 82.8 32 .C..C......G.A.......G....... GCCATGTAGTGCGGGACGGGCTCAGCCTTCAC 158253 29 79.3 32 ..A........G.A.......G..GC... TAGGGTGAGAAAGACTGCGTGAGAACTCACGC 158314 29 93.1 32 ...A.........A............... AGGCCACGCCATCCGCCTTTGTACGAATCGGC 158375 28 72.4 0 ..TA.......G.A.......C..-G..T | A [158398] ========== ====== ====== ====== ============================= ====================================================================== ================== 14 29 93.1 35 GTGGTCCCCGCACCCGCGGGGATGTTCCC # Left flank : ACTACCCACCACCGCAAGCACCCCGGCCGACACCCCCACCCCCACCCGCCGCGTCCTCGTCGAATGCACCGACTGCGGCCGCCCCGGCCAACCCGAGGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCACACCATCCACACGGCAGGCAGCCAGCCCTCGCCCGACCCCACCCAGATCGCCGCCGTCAAAGCCCACATGGCCAACCTCCGCGACCTCCTCAAACCCGTCTGAGGGCCCGGACCACAACCGACAAACCCACCGCCGCCCGGTCACGGAAACGCAGAGCGAAACGCACTCTCAGCACGACCAACACGTCTGCCCCGAAGAGACCATGAGCTTGCCTCTTCCGAGGAGACCGCGCCGTACGGCCAGTAGAGGGCAGAATCACCAGGGACGAACGTCAACCGCGACCGCCGCAACGACAGGTTCGATATGTCCTTTTCTGAAGAAGTGAGCAAAAACCGCTCCCTGACCACATAAAGCCGCAGGTCACGAAGGG # Right flank : TGGTGCCAGAAAGGCAGCAGATCGACTTCTCTGAACTAGGGAGAGAATGACTGCGTGAGTCAGGACTCGTCCGACACACCCGTTTGCGTCAACAAGGAACCCCGAAGCTCCCTCATTCTGATAATTTCCAGCGCAAGCGGCGTCAACTCAGCCCAATCCGAGTTGAGGCCCCGTCACGCGTAGGCCGACCACTAAGGAGCCTCTGTTGAGCAAGAGAACCTCGATCGTGCCGTCAGACCATGACAGCCAGCCACTGCTCGCCGTCCTGGTCTCAGTCAGGTTGACCGTGCAGCCGGCACTGGCTACGCGGCTCCGTATCCCGCTTGCAGCAATGGTCACCGCAATCGCTGTGACCATCGGGGTGCATGGATGGATGCGATAGGCCCGCACCCCGAGGCAGTGCGCGTTCGGCCGAGCATGCCCGCGATAGCCAGTTCGAGTCACCCTGTGCGACCAGAGACGTTCACATGGCCGCACAGGGCGGCATCGAGAATCACGCG # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:-0.19, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACCCGCGGGGATGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 168872-169326 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZRD01000017.1 Streptomyces sp. PTY087I2 A3Q37_contig000017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 168872 29 93.1 32 .....................C......T GGTCCCGTCGTTGTTCCGGAAGCGTGGGCGGA 168933 29 96.6 32 .....................C....... GTACCCGACCCCGACCCGCTCATCGAGCAGGC 168994 29 96.6 32 .....................C....... TTACCCCTCGGCTCCCGCACCCATCCGGTCTT 169055 29 100.0 32 ............................. CTGTCGCTGTCCACCGCAGACACGTGGCTGGC 169116 29 100.0 32 ............................. GTGTCCCCGGACGTACCGGCGTGCTCGACGAT 169177 28 93.1 32 ....C............-........... ATCTCCCCGCACAACGTCAGGTCCTTGCGGAT 169237 29 93.1 32 ............TA............... CACGAAGTACACACCGACCCGCACCTCGTCGC 169298 29 72.4 0 T.........T.TA.......CC.C..T. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 93.1 32 GTCGTCCCCGCGCGTGCGGGGTTGTTCCC # Left flank : TGGTGACCGTCATCATCCTCACCAACTGCCCGGCGGGCCTGAGGGGCTTCCTCACCCGCTGGCTGCTGGAGATCTCCCCGGGCGTCTTCCTCGGCTCCCCGTCCACCCGTATCCGCGACCTCCTGTGGGCCGAGGTACGCGAGTACGCCGGCCAGGGCCGCGCCCTGCTCGCCTACCAGACGGACAACGAACAGGGCTACGCCTTCAAAACCCACGACCACACGTGGCACCCGACCGACCACGAGGGCCTGACCCTCATCCACCGCCCGACCGCCCGCGCCCCGCGCACGGGAAGTCCGGGGAGCGCAGCGGCCGATGTTCCCCGCCAGGGCTGGAGCAAGGCGTCGAAGCGGCGGAGGTTTGGGGGCGGGAGGTAGTTGGCGGGTGCGGGGACGGGATGTCTTCGTGGTCCCTGAAGAACAGAAGGATCCGTTATGCCGGAATTTCAGGAAGTGAGTGAAACCAGGCTCCTGCCCGCATAGAGCACCAGGTCAACGACT # Right flank : CTCAGTGGTGCACGCCCTGTGGGCCTGACCCCGCCGGGGATCGTCAGCTCGGAGGGTCCATGAGCGGGTGGCCCCTGGAGTCCCCGCGACCTCTGCCGACCCTGCCACGCCACCCACTCCAAGAACGAACAGGACTCACCCGACCCCACCCAAATCGCCGCAGTCAAAGCCCACATGGCCAACCTCCGCGACCTCCTCAAACCCGTCTGAGACACGGCGAGCCGGTTCGTTCCGCCGTCGTCCCGTCGAACCCTCGAACCGGTGCCGGACTGACTAGGAGCCGTGTCGGGGGGGATAGCCCCCGGGTCGATCCGGGGGTGCGCCGGATCGACCCCGCTCGCGGGCGTAACTAGCGTTCAGACATGGCTCTGACTCTGCGCACGCACCTCATCACGGCTCTCTGCTGTGCCGCTGCTCTGCTCGCCACCGGTATCGCCCCCGCCCTCGCCTCGCCCGTCGGGCCCTCCCCCGCCGAGCAGTTACGCCGGGACACCGTGGCG # Questionable array : NO Score: 5.38 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCGTGCGGGGTTGTTCCC # Alternate repeat : GTCGTCCCCGCGCGTGCGGGGCTGTTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 80689-81268 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZRD01000023.1 Streptomyces sp. PTY087I2 A3Q37_contig000023, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 80689 29 100.0 32 ............................. GGGGTTTCCCGGGACCCGGGGAAGAGGGGAGT 80750 29 100.0 32 ............................. AACCGGGCATCACGATTCAGGTGTATCCGGAG 80811 29 100.0 33 ............................. TCCTTTGTGACCTATCTCAGCAACGCGTCGACA 80873 29 100.0 32 ............................. CGCGCTCCACATCAGCGATAGCGAGTCCCCAT 80934 29 100.0 32 ............................. ACCACGGTCTTGAACTGGGCGATGCGGGCCTT 80995 29 96.6 32 ............................G TCGTACCTGGCCATCAGTCCACCACTCAGCTT 81056 29 96.6 32 ...............T............. GTCCAGGGAGACACGTCCGACCCAGGACGCCA 81117 29 96.6 32 ............................G GGTTCCGGGGTGCACCTCGCGACCCTCGCCGC 81178 29 96.6 32 ............T................ TACTAGTTCCGTGTGTTGGGAGATCCTGAGGG 81239 29 89.7 0 .....................A.C.C... | C [81260] ========== ====== ====== ====== ============================= ================================= ================== 10 29 97.6 32 GTGGTCCCCGCACCCGCGGGGGTGTTCCC # Left flank : CCCGGCTGCCAGCCGCCGCAAGCACCCCGGCCGACACCCCCACCCCCACCCGCCGCCTCCTCGTCGAATGCACCGACTGCGGCCGCCCAGGCCAACCCGAAGCCCTCCCCGACGGCCTCTGCCACCCCTGCCGCGCCACCCACTCCAAGAACGAACAGGTCCCGCCAGACCCCACCCAAATCGCCGCCGTCAAAGCCCACATGGCCAACCTCCGCGACCTCCTCAAACCCGTCTGAGCCCCAACCACAGCCGACCAACCTGCCCCTGCCACCTACAGAAGCGCGGAGCGAAACGCGCCCAGCGACACCAACACACGTGCCCCGACGGGACGATGGCCACATTTCTCAGCCGAGGAAGCCGCGCCGTACAGCCAGCAGAGGGCAGAATCACCATGACCAAAATCCAACTGCGACCGCTGCAACGACAGGGGCGATATGTCCTTTTCTCAAGAAGTGAGCAAAAACCGCTCCCTGCCCACATAAAGCCGCAGGTCACGAAGC # Right flank : CAGCCCACCACCACCAGGCTCACACCCCCACCCCCTTCACCAGATCCACCGCACCCGCCTCCTCCGACTCCGGCAGCAGTGCGTACCCCTGCCGCTGGTACAGCGCGATGTTGCGGTGGCTCGACGCGCCGGTCGACAGGACTATGCGGGCGCATCCTTCCCCCGCCGACTCGGCCAGGTGCAGCAGCCAGCGGCCCACTCCCTGGCCCCGCAGGTCGGGGGCGACGGCCAGGCGGCCCACGTGGAGGTCGGTGTCGGTGCGGCGGGTGCGGACCATGCCGAGCAGGTGGGCGTCCCGCCACAGGCCCGTCGTGTGCCAGTCGGCCAGCCAGGCGCGGATGTCGGCCGGTGACTCGTGGAGCGCCGGGATCGCCAGGGTGTCGTTGACGATCGCCTCCTCCATCCAGCAGCACCGTTGCAGCACGGTCACCTCCGCCGCGTCGTCCGGGCCGAGCCGGCGCGCGTACGAACCGGGGAGCGGGCCCGCCACGGACGCCGGG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACCCGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 319-775 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZRD01000027.1 Streptomyces sp. PTY087I2 A3Q37_contig000027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 319 29 93.1 32 .C........C.................. GGGTGCAGTGGTCGGGGTGGTGGATGTCGCCG 380 29 93.1 32 .C........C.................. GCGCTCACCCTCACCGGCATCAGCCGCCCGTC 441 29 96.6 32 ..........C.................. CACCTGGCAGGTGTTCACCAGGCCGGAATCAG 502 29 100.0 33 ............................. CACCTCCCGGCCGCAGTACGCGGTGGAGCGGAC 564 29 100.0 32 ............................. ATCCTCGCGGCCGCCGACAGTGCGCCCGGAAG 625 29 100.0 32 ............................. TCGACCTGCGCCGGGCCCCGGTCCGCCGGCCC 686 29 96.6 32 ..........C.................. CGCGGCGCGGAGCATGGAGCGCAGGAGCTCCA 747 29 86.2 0 ..........C...T......A..C.... | ========== ====== ====== ====== ============================= ================================= ================== 8 29 95.7 32 GTGGTCCCCGTACGCGCGGGGGTGTTCCC # Left flank : CCCCACCGAAATCGCCGCCGTAAAGGCCCACATGGCCAACCTCCGCACCCTGCTCAAACCCGTCTGACCCCAACCACGCCTGAACAACCCGCCACCGCCAGGCCTACCGCCCCCAGCAAGACCAACACACAGACCCCGACGGGACGAAAGCCACGACTCTCTCCTCCGAGAAACCCGCGCCCCACAGCCGGGCAGAGGGCAGAATCGCCACTGACGAACTCCAACTGCGACCACTACAACTCCAGGGGCGGTATGTCCGTTTCTCAAGAAGTGAGCAAAAACCGCTCCCGGAGCGCATAAAGCCGCAGGTCACGAACTG # Right flank : CATACAGCTACAGGGGATCTACGAGAGGACGAGCTACCTACAAGGGGTCGCCCCCGAAACATATGGGCGTGCGCTCCCGGGCCCTTCCGCGATCATGAGCCGATGAGCCGGATCAGCCAGGAATCCCAGGAATCCGCGGACGTCAGCGCGGCCATCGACGCCGAGCTCCAGTTGCTGGACCCCCGCGTCCGCGCGTCACGGTCGCTCGCCGCGCGCCTCCTCGACCCGGAGTTCGTCGAGGTCGGGGCCTCGGGGCGGCGGTGGACGTACGAGGAGATGCTCGCCGCCCTCCCCGAGCTGGACGGCGGGGGCGGGGCCCGGTTCGAGACCTCCCGGATGGGCGGGGTCGTCCTGGCCCCCGGGATCGTGCACCTCACGTACGAGACCGACTTCGGCGGGCGCCGGGCCCGTCGCAGTTCGCTGTGGCGCAGGCGGGACGGGGAGACGGGCTGGCGGATGTACTACCACCAGGCCACGCCCGTCCCGGTCGCCGAGTGACC # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGTACGCGCGGGGGTGTTCCC # Alternate repeat : GCGGTCCCCGCACGCGCGGGGGTGTTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.90,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 30076-29560 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZRD01000049.1 Streptomyces sp. PTY087I2 A3Q37_contig000049, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 30075 29 100.0 32 ............................. AGCAACCACAGGATGCGCGTGCGCGCGGGGCG 30014 29 100.0 32 ............................. CAACTCCCCGCCGCACGCCGCGCCTCATGCAT 29953 29 100.0 32 ............................. ACCAGGTAGGGGCCGTCGTCCCAGGGAGCCAG 29892 29 100.0 32 ............................. GTCGCCGTCGGCCGGGACATCACCGCCGCCCT 29831 29 100.0 32 ............................. ATGGCCGTCCTGCTTGCGGACGGCGGTCCGGC 29770 29 100.0 32 ............................. ATGATCTCCGGGGTGCTGCAGACTGAGCAGCG 29709 29 100.0 32 ............................. TCGTCGACCACGGCCTGGTCGCCGAGGCTGAG 29648 29 100.0 32 ............................. GCCATATGGGCCGGGGGTGCCCACCCTCAACC 29587 28 89.7 0 ...G.................-..G.... | ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.9 32 GTGTTCCCCGCACGCGCGGGGGTGTTCCC # Left flank : GCGACACCGACCCCCACTGCTCCGAGGACGGCGTCACCCTTCCCTGCAACATCCGCGGCCACTGACTGACCGCGCAGCTCTCGACTCTCGCGCGGCGTGGGCTACTTCCCGTCCAGCTCACTGACGAGGTTCCCGAGCGGTACGCCGACCGCGCCTGCGGGGTGGTCCCGCACTGCCCGCGACGACGAGTGGTGGACCACCTACCTGGCCACCGAGAAGGCTGCCCAGACCCGCAGCCCTCGACCCCGCCGAAATCGCCGCCGTCAAAGCCCACATGGCCAACCTCCGCGACCTGCTCAAACCTGTCTGAGCCCCAACCATGCCTGAAACCCGCCCCGACGGGACGAAAGCCACGCCTCTCTTCCGGGGAACCCGCGCCACACAGTCAGCAGAGGGCAGAATCGCCACTGACGAACTCCAACTCCAGGTGCGGTATGTCCGTTTCTCAAGAAGTGAGCAAAAACCACTCCCAGAGCACATAAAGCCGCAGGTCACGAACG # Right flank : GCACCCTCCGCGACCTCCTCAAAGCGCCCTGGGGAGGCAGGCAGGGCGCCGTCAGGGCGTGACGATGGCGAAGCCGGGGTCCGGGGTGTCGAGGGCGGACATGAGGATGGTCAGGGCGTCCGGGTTGCCCGTGTGCTCGATGCCGGCGAGGCCCAAGCCGCCCAGCAGGTCCATGAGTTGGGGCTTGGTCAGGGTGAGGGTGAGATCCGCGTTGTCGGTAGAGCCGTCGGTGGAACCGTCGGCTGAGTCTTCGGCTACCCGGTGGTGCACCAGGACCCCGTTGCGCAGGCTCGTCCGGTGCGTCTCGTCCAGGTCGGTGAACCGCCACACCACCGCCAGCGAGTGGTCCCAGGCGCGCGGGCCGTTGACGCGGATGGCGAGGGAGTCGAAGATCTGCTCCACGGAGAGCGCGGCGGCCATGCTGTCGGCGGCGATCGGTACGGGCTTCACGCCGTTGCGCAACTCCTGCGCGCCCATGAGGTAGTTGTTGCGCCAGGTTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACGCGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCGCCCGCGCGGGGGTGTTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 33180-32846 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZRD01000049.1 Streptomyces sp. PTY087I2 A3Q37_contig000049, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 33179 29 96.6 32 .C........................... CAGGCGCGAGGGTTCCGGGGGTCCTGGGTCCA 33118 29 100.0 32 ............................. CTCCGCCAGATGCGGTCCGAGGCCGGTCATCT 33057 29 100.0 32 ............................. GACTTCCGCCAGTACCGTGCGGTGCTCTCCGG 32996 29 100.0 32 ............................. TGCGGGCCCGACCCGCTCTCCCGGTCGGAGGC 32935 29 96.6 32 ............T................ TGGTGCTTGGCTGCTGTCGCCTGCTCAAGGGT 32874 29 93.1 0 .....................A......G | ========== ====== ====== ====== ============================= ================================ ================== 6 29 97.7 32 GTGGTCCCCGCACGCGCGGGGGTGTTCCC # Left flank : CCCCACCGAAATCGCCGCCGTAAAGGCCCACATGGCCAACCTCCGCACCCTGCTCAAACCCGTCTGACCCCAACCACGCCTGAACAACCCGCCACCGCCAGGCCTACCGCCCCCAGCAAGACCAACACACAGACCCCGACGGGACGAAAGCCACGACTCTCTCCTCCGAGAAACCCGCGCCCCACAGCCGGGCAGAGGGCAGAATCGCCACTGACGAACTCCAACTGCGACCACTACAACTCCAGGGGCAGTATGTCCGTTTCTCAAGAAGTGAGCAAAAACCGCTCCCGGAGCGCATAAAGCCGCAGGTCACGAAC # Right flank : GACGGCGTCGGCAAGGACGGCCGCTACGGTAGGGACGAGCGGCCCGGCTTGCCCGGACGGGTACGCGCTGCATCCGGTACCCACGGATCCGGGCTTCCTCGTCTGCCGGCGGACGAGGGCTCCGACCGAACCGGAGGGCCCGGCCAGCACACCGAGCCCGCTCGCCGCAGGCCTGGACCGCGACCCGCCGCCAACACCCATGAGCGGGCCCCACGGCGGGGCCCGTTCGTCATGACCATGGAGTCATCCGAGGGAGTCGATGGCCTTCACTATGAGGGCCCGTGCTGCCGCGCCGTACACGGCGGTCTGCCGCAACTCCTCGAAGGCCTTGGCGTACAGGGCGATCTCGCTGGGCTGGGTGATGCGGACCCGGGCCGAGACCAGCTCGACGGAGACCAGCGAGTCGTCGTAGACGTGGAACGTCTCGCGCGGCCACTGCTCGCGGTGCGCGGTCGACGGGATGACGCCGAGCGACACGGCCGGCAGGGCCCCGGCGGTCA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACGCGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //