Array 1 120639-120301 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MITF01000108.1 Vibrio parahaemolyticus strain CDC_K4775 CFSAN011179_contig0107, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                       	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	======================================	=====================================	==================
    120638	    38	 100.0	    37	......................................	TACTGACTTCTACGGAATGTTCAATAATGCTCAAAAT	
    120563	    38	 100.0	    37	......................................	ACAGAATTTCGGAAGCATGTTTATGTATGCAAGAGCA	
    120488	    38	  97.4	    37	..............A.......................	TACTAACTTTAGCAGCATGTTTTCTGCAACAAGAGAT	
    120413	    38	  84.2	    37	.........A.T..AG.............T..G.....	TAGAAATTTTTCATACATGTTTGATAATGCCAAAGCA	
    120338	    38	  89.5	     0	...........T..A...A.T.................	|                                    	
==========	======	======	======	======================================	=====================================	==================
         5	    38	  94.2	    37	TTTAATCAAGACATCAGCGGCTGGAATGTATCAAATGG	                                     	       

# Left flank :   TATATGTCGATTATTTTTTGTTTTTCAAATAATTTGTATATCATATTTTATATGATAAATATTAAATATATCAAAACTATAATTTCATTATTTAAAAAAGGAAGGAAAAAATGAAAAAAACAATAATTACATTAGCTCTGTTAACAACATTCGCATCACAAGCTGCTTTCGTATCGTTCATAAGCGACAGCAAATACAATATCGCGTCAAATGATCCCTCGTCAGAAACTGGTCAAATCGTTGGCGGTGGCGAGTACGTATCTAACGAACCGTCAACTGGCGGTGGCAGTGAACCAGTTGCCCCAAGTTGTGAAGGTCCAGAACTGACGAAAAGACAGTTACAAGACCTTGTAATGTCAGGCGGTGACTACTCAAAAGCTTGTGTAGGCACAATCACTGATTTTTCACTTGTATTTATGAATCGTAATGTCAATTACGACATAACAAATTGGGATGTTTCGAGCGGTGAAGATTTTAGCGGTATGTTCGAAGGTTCTTCT
# Right flank :  CAATAATTTTAACAGAATGTTCAGATCAGCAAATGTGTTCAATCAAGATATTAGTGGATGGGATGTTACAGCAGCAACAAGTTGGTATGATTTTAATCAGAATTATCCAGTGGTTTTAGCATCAGAAAATATTCCTGCAAAATTCAGATAAAGTGGGGTTATTATGATTGCAATAATTATCATGATTATGATGTTTTTGGGTTTCTTCATAGTTGTTGCGTATAACATGATGTCATTGAACCACAACTTAGTAGTGTCAGCAGAAGCTGACACTATTGAGAATGAGTTAGAACTGATAAAAACAAAGCTAATCAAATCAGCTTTATCAATCCAAGGCAAAGACAACTATTCTTTGCCTTTTGGTTTAGATTCAGGCAATAAACACAGCTTGCCGTTAGGTTTAGGGCTACCACTCAGAAACATCTCTGGTTACGAGTATCAGTATTGTCCGTTTTCGAAAAACATTGAAGAAGGGACGTTAAGCGTCTCTCAAAACATAG

# Questionable array : NO	 Score: 2.69
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TTTAATCAAGACATCAGCGGCTGGAATGTATCAAATGG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:60.53%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-0.90,-1.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [10-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,0.78   Confidence: MEDIUM] 

# Array family : NA
//