Array 1 6779592-6778465 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVQE020000001.1 Streptomyces sp. BRB081 Scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 6779591 28 100.0 33 ............................ TCTTGGGCTCGCCCTTGTCGTCGGCGGAAATCC 6779530 28 100.0 33 ............................ GCCCCCGCCGGACCTCGGCGGGGGCTTCGTCAT 6779469 28 100.0 33 ............................ GCTCGACGCCACGTTCGCAAAGAACCTGGCGAT 6779408 28 100.0 33 ............................ CGGCCCGCTACCGGGACCGGAGTCACCGGCGAG 6779347 28 100.0 34 ............................ CGACATCGTGTTCGCCGAGGTCGAGGAGGACATG 6779285 28 100.0 33 ............................ GGCGGGCGTCCGCCAGGCCGCCGGAGGCGGCCC 6779224 28 100.0 33 ............................ CCGGCTGCGGCATGTGCTGGAGAGCGTCACCCG 6779163 28 100.0 33 ............................ TGTACCGCGATAAAGCCGAGTGGTACCGAAACC 6779102 28 100.0 33 ............................ GTCCTGGAAAACGGCGACGATGTGCACATTCAC 6779041 28 100.0 33 ............................ CTCGGCGGCGCCGACAAGGTCGCGGAACACTAC 6778980 28 100.0 33 ............................ CGGGCAGCAGCGCGCGGGGCACCTGCCCGGTGC 6778919 28 100.0 33 ............................ CTGTGGCAGGTGGACTCGCCCTCTTCGTAGATC 6778858 28 100.0 33 ............................ GCCGCAGAGAGGAGGGGGCTTGCCCCCACCGGC 6778797 28 100.0 33 ............................ GTACGCGAGGGCGCACGTCGGCCTGCTCACCGG 6778736 28 100.0 33 ............................ GCCGAGCACGAGCGCGGCCTGACCCTCCAACTT 6778675 28 100.0 33 ............................ TGCCCGCGCCCCGAGCATCTGCTGATACGCCCC 6778614 28 100.0 33 ............................ GGGCGAGGAGGAGGCGGGGGCGCTGCGTGCCGA 6778553 28 100.0 33 ............................ TGCTGTAGGCGCCCGAAATGCTGAAAGGCCGCA 6778492 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 19 28 100.0 33 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : CGGCCTCTTCGTCACCCACCGCCTCGCCTCAGCCCGCATCGCCGACCGCGTAGTGGTCCTCCACCACGGGCCGCGTCACCGAATCCGGAACATACGACGAGTTGCTACACCAACCCGGCAGCCGCTTCGCCGAGCTACACCAACTCCAAAGCGGAACCGAACTGGTCCCGTGAACATTGCCCCCGCCTGGCGTCGGCCCTCCCACACCTGACCCCATTCCCGGGAGAGTACAAGCCGCCTACCAGCAGCGCCTGGAGCAACGCCACCCGTACCCCCAGCAGAACCAACAGCCACCTCAGCGAGACGAGCAGGCACGCACCGTCCGGGGATTGGGAAGGTGTGACACCCTCGGATTCCGTACGGTCCGCGAGCCTCTCGCGGAGGTCGCGTACATCGCGATCTCTGAAGACGATCCCCATTCGCTCCCGACCCACGAACGAAGGGTGAAGCACATGAATGAAAATGAGGCACCCTCGCGGTAACCTCCCAGGTCAGCAAGT # Right flank : CCCTAAGACCGTGTCCTATGTGGGGTCGGCTCGTTGGAATGGTCATGGGGCGGGGTACGTGGAGTTGGATTGTTCCGGACGGGCTGTGGGAGATCGCGGAGCCGCTGATCCCACCGTCAAAGGTGCGGCCGCAGGGCGGCGGGACTCAGGACACGCCCGATGAGACTCTGTTCGCCGCGATCATCTACGTCCTGGTCAGCGGNGTGSGRSRGGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACGCGCGTTCCTACGGAACGCCAACCGATGCCGTCCGCCTTCGGCGGACCGGGCCTGCGGCCCTCAGCGGGTGGTCACCTTCGGTGACCACTTCGGGCCTTCGGCCCGGGGCCGGCCTCCGGCCGTCCCTGGGCTGGCTATGAGGTGGGGCGGTGCGGTTTCTGGTGAAATCGCTGGTGGTAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [38.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 6783670-6781998 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVQE020000001.1 Streptomyces sp. BRB081 Scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6783669 28 100.0 33 ............................ CGACGACGTGGCCCGCGCCCTGGTCCGCATCGC 6783608 28 100.0 33 ............................ GGGCGCCAAGGGCGTTTGGGTCGCCCGGCGGTT 6783547 28 100.0 33 ............................ GGTGACGGAGCGGTCCTGGCGGCGGCTGCCCTC 6783486 28 100.0 33 ............................ CTGCTCATGCTTCGGGCCGGTCTCCAGGGCCGC 6783425 28 100.0 33 ............................ CTCGCCCGCCAGGTCGGTGTGCCGGGCAAGCCC 6783364 28 100.0 33 ............................ GCTGCCCGAGGACACCATCCCCGACCAGTGGCT 6783303 28 100.0 33 ............................ CCCGGCGCTGCTGCCCCGCACCCCCGCCGACCG 6783242 28 100.0 33 ............................ GGAGAGCGCCATGGCCGAGGCCAAAAGCAAAAC 6783181 28 100.0 33 ............................ GTCGCGCTCCAGCCGCTGCGTCAGCGATGCCGC 6783120 28 100.0 33 ............................ GCCGCACGACCTCCAGGCGGCCACGGTGGAGCC 6783059 28 100.0 33 ............................ GTAGCTGTAAACGTCGCTGCGCACGTCGCTGCG 6782998 28 100.0 33 ............................ GTTCCCGGGCGAACCCCTGTACCTCCGGAACGA 6782937 28 100.0 33 ............................ GCTGAGCGACGGGCAGAGTGTGCCAAACAGGGG 6782876 28 100.0 33 ............................ GCGCCGCCGGCACCTGTCCCGGCCGCCGTGGCG 6782815 28 100.0 33 ............................ GCGTTCGTAGTCGTCCACCAGGGCCCGCTTCGC 6782754 28 100.0 33 ............................ CCGGGCCGGAGTCATGGGCGGCGCCATCACACG 6782693 28 100.0 33 ............................ TTCTGTATGCGTTCGGGTGGTGTGACGGACCGG 6782632 28 100.0 33 ............................ GCTGTGAGCCGGGTAGCGGACCCAGCGGACCGC 6782571 28 100.0 33 ............................ GAGGCCGGCGGTCGGGTCGAAGTCCTGCTTCGA 6782510 28 100.0 31 ............................ GCGACGCTGGCCAGGAGTTCGGCGGCTACAC 6782451 28 100.0 33 ............................ GAGGTCCGTGTGGTGGCTGCACTACACACCGCC 6782390 28 100.0 32 ............................ CCGACCTCGACGCCGGCCCCCGCCCCGCCGCC 6782330 28 100.0 33 ............................ GCGGTCAGCTACCGGCAGGTCCTGGCCGACCCG 6782269 28 100.0 33 ............................ GGTGGGCGGTCGGTTCGTGGCGTGCGGGCCCGC 6782208 28 96.4 33 ....A....................... CATGTACGCCGCCAAGGCGTCCGCGGAGGTGGG 6782147 28 100.0 33 ............................ GTGCTGCCCTCACCCTCGGGTGAGGGCGGTAGG 6782086 28 100.0 33 ............................ GAGCGCGGCGAGGGTCGGCCGGTGGAGAGTGCC 6782025 27 85.7 0 ....C..............A.G...-.. | A [6782003] ========== ====== ====== ====== ============================ ================================= ================== 28 28 99.4 33 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : AGGACGATGTGCACCGCTGCACTCACCGGGCGGCCGCCTGCGCCAGGCGCCGGTCCAGTTCCCCGTCCAGCTCCTGTTGTTCGGTGGTGCTCGGCGCGTAGCCGGTCCACCTCTCCAGCGCGGCCCGGGCCTGCTCCGCCCGCTCGGCGCGTTCCTCCGGCGTCAGCAGCGTCTCAGCCAGCCGGGCCAGGTAGGCCCGCAAGGACAGGCCCTCGGCGGCGGCGATGGTCGCCAGCCGCTCCTTGGCCGCCTCTGGGATGCGTACGTTCGCGTCGGACACGTCTACTCCTCCTCCAGGGGTACGGGTACGTACCCGTACCCTACGGGAGATCTTCTGCGTCTGTGGGCCCCGGCTCGTCCGTGACCGCCGGCCGCTGAGGTCGCGTACATCGCGCTCTCTGAAGACGATCCCCGCCATTCGCTGCCCGACGCACGAACGAGGGGTGACGCACATGAATGAAAATGAGGCACCCTCGCGGTAACCTCCCAGGTCAGCAAGT # Right flank : GCTACCTGCGGCGGGGCTCGCGGGCCACGACGTGTCCTCTCCGCGCGAGCGGAGGTACCCCGTTGATGCCGTGCCTGAGGACGACGATGCCCTCTCCAGCGTGAGCGGAGGAAGCCCTGCGCAGCCGCACCGGGCCGTTGATGCGGACAGCGGCCAGCGTCGCGGCCGGGCCGGGAGTATCACCAGCAGCGACGCCTGTACGGCCGTGCGCTGTACGCGGCTCCCGTACCGCGGCGAGAGAGTGGTAGGAGCGGTGCGAGAACGCCGGCGGGCGGGGTCAGCCCCGGCGGCACCGCTCCCGAAGCTCCGCGAGGATCGCCTTCTCGCGGGGGTCGACGTCACCGTCCACGGTGGCCACGCGCTCCGCCGCGTCGAGGACATCGCCGAGGTCTCCCGGTTCCGCGTCCATGCGCTTCCACACCTCGGCGGGGTCGATGTCGACGACGTTCGCGAGTTTGTCGTCGACCACCTCGTGCCGCTCCCGGACCAGCCTCACGAGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 6789838-6788831 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVQE020000001.1 Streptomyces sp. BRB081 Scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 6789837 29 96.6 32 ............................T GCCGCGGCATCCGACGGGGTCTGTAGCAGGGC 6789776 29 96.6 32 ............................C TTTCCTGGTTTCCATGGTTTCCGGGAGGGGGG 6789715 29 100.0 32 ............................. TGGCGCACGTTCATGGGTGAGGACTTCTGGGC 6789654 29 96.6 32 ............................C GAGTGGGACTCGACACGCGCGTTCACCAGCGA 6789593 29 100.0 32 ............................. GCGCCTGTCCGGATTTGGTGACGCGGGTCGGG 6789532 29 96.6 32 ............................A GTGAGGCGGATGGGCTGCGCGAGAGCGCGGGC 6789471 29 100.0 32 ............................. GCGCTGATCCAGGCACAGACCGCGCACAACGC 6789410 29 100.0 33 ............................. CCCTCCGAGCGGTTCGGTCGGGGGGGGCGGGCG 6789348 29 96.6 32 ............................C GGATCGCAACGCATGGGAACGTTCATCACGTC 6789287 29 96.6 33 ............................T GGTCCGGTGGTGTCGCCGGCGGCATCATCGCCG 6789225 29 100.0 32 ............................. CTGCCGCCGCAGGGCGGGCGCCTGGGCGTCGA 6789164 29 100.0 32 ............................. CTCATGGCCCGACCGATCTCGTGGGGCTCCAA 6789103 29 96.6 32 ............................C TACCACGCAGCACGCGCCTACCAGCAGGCTCA 6789042 29 100.0 32 ............................. GACCAGGGCGCGAGGCCCGCGCGGGAGAGCTT 6788981 29 96.6 32 ............................C CGCGTCTCGGCGCCCGCCGCACCGACATCAGC 6788920 29 96.6 32 ............................C CGGCTCGTCGTCATCCGCGACAAGGAGATCTG 6788859 29 93.1 0 ...........................TC | ========== ====== ====== ====== ============================= ================================= ================== 17 29 97.8 32 GTCGGCCCCGCACGCGCGGGGATGCTCCG # Left flank : TCTCGGCCTCCCGCTGCTCGGCTGTCGCGATCGCCTTGTCGATCCGGGCCAGCCACATCGCGTGCCACGTCCGCAGCACGTGCAGGCGCGGCAGGTCGGCGGGCAGATCGGACATGTGTTCGAGTCTAGGTATGTTGGTGTCGGCGGCGTGCGCCACCCCCCTGCTTGACTTCGAAACGCCGCCTTCCTTCCCCTCTCCCATCAGTCCGCCCGGCCTGGTACCGGGGCCGCATCGCCTGCATGGAAATCTCGCTCGCCACGGTCATCGCCCTGGCACTCTGCGGTCGGCGGGCCCACTGGGTACTGGGCGCGCGGCAGTTGCCCACCGAGGCGCATGCGTGGGTGTGGACCGAGGACGACGCATTCGGGCTGTCCGGCCGCGACCGCCCGGACCCCCGCCGCCCCTGGCCCGGCGCCCTCGCCGCACCTCCCGTGCCGAAAGGGTGACGCACATGAACGAAAATGAGGCATCCTCGCGGTAACCTCCCAGGTCAGCAAGT # Right flank : TCCACGGCCTGAACGCGATCGTCGAATCCGCCCTCGCCGACCCAGACGACTTCCGTGCGTTGTCGGAGGCGTACCGCCGCTCCCGGCACCGGATCGAGGTCGTCGCGCTCGCGACGCCCGAGGTGTTAAGCCAGCTGGGTACCATCGATCGCTTCCTCACCGAGGCCTCCGTCGGCGCGGGCGGACGGTTCGTGACCTGGGCGAACCACGACGCATGCACGAAGAACATGCACACGACGCTCGCCGTCATTGAGGCCGAGTAGCTCGCCGACGGCGTCACCGTGGTGTCCCGCGACGGCACGGTGCTGGACGACAACGAGCTCGTCGACGGCGCGTGGCGGCGCCGGCCCGCTGCCGACAAGGCGGTCGCCCGAGGCCGCTCGCGCACCTGGACGGCCCGGGAGACAGTTGTGTTCCAGCAGGAGATTGCCCGAGCCGAGGTGGGCGTGCACCGCGACGTGCCGAGCGAGGACGAGCGCCTGGCCGTCGTAATCGACGGA # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.64, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACGCGCGGGGATGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACTCGCGGGGATGCTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 6792014-6790993 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVQE020000001.1 Streptomyces sp. BRB081 Scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================== ================== 6792013 28 100.0 33 ............................ ACGCTCCCTAGACCACCTCTGACCTGCGGGTTT 6791952 28 100.0 33 ............................ GCTCCACCCCCCCAGAACCCGCGGCACACCGTG 6791891 28 100.0 33 ............................ CCCGAGGGTGTCGGAGTAGTTGTGGCACTCGTC 6791830 28 100.0 33 ............................ TGCCGACCTCGTGCGCCGGCGCAGGGTCAGGGC 6791769 28 100.0 33 ............................ TGACTGGCACGGTTCGTGTTGCTGTCATGCGCG 6791708 28 100.0 33 ............................ GTGTGGGTGAGGGTCGGAGCTGAGGCGGGAAGG 6791647 28 100.0 33 ............................ CCTGTCAGCGGACTGGGAGCGGCGCGTTCACCG 6791586 28 100.0 33 ............................ CGCGCTGGTGTTCCTGGGGGGCACCCTCGACGG 6791525 28 100.0 33 ............................ GGCCGTCCAGGCTTTCTACCGCTTCAGCAAGAC 6791464 28 100.0 50 ............................ GTCCGTGCTGCTGCGGACGATCCTCGGGACGGCGGACGTTCAAGCAGGCG 6791386 28 100.0 33 ............................ TGGGAGCGCCCCCGCCGGGCTCCTTCCGGCGGG 6791325 28 100.0 33 ............................ GCCCTACCTGGCCGCAACGACCAGGCCCCGCTT 6791264 28 100.0 33 ............................ CTCGTCCCGGCCGATGCCTCGCCCGTCTCGCCG 6791203 28 100.0 33 ............................ GCTGGAGGCCGACCGGCTCACCCCGATCCCTGG 6791142 28 100.0 33 ............................ GGTGGAGCCAGCTCGACGGACAGGAGGTCGACC 6791081 28 100.0 33 ............................ CGTAATCCGCGCCGAATTCGAAAGCATGATGGA 6791020 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================================== ================== 17 28 100.0 34 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : TTGAGGGTGGCGACGGCCTGTTCGACGAGGGCCCGGATCTTTGCGTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGGTGAGCAGGGCCTGGCGGCCGGCGGTCAGGCGCCGCCACCGGGAGCCGATCGCGCGGCGGTGGCGCCGCAGCTGCTGCGTGAGGAAGCGGAGGGCGGAACTGGACACGTCGACACCCGACGGGTAAACAAGCATGCGAAGCCTCTGGTGGAGACGGTTCTCTTGGTCGAAAACCCATCTACCAGGGGCTTCACCACCTTGTCAGCCCAACTGTGGTACTCCAGCAGCAGGTTGGAAAAGGCTCCGTGCTCCCTGAACTCCACCACTCGCTGCCCGGCCCACGAACGAAGGGCGACGCACATGAATGAAAATCAGGCACTCTCGCGGTAACCTCCCAGGTCAGCAAGT # Right flank : CCCGGCCGCCGCCGGCGAGAATCACCTCGCCATGTCGGCCCCCGGGCGCCTCCTCGGCATCCGTACGCCCCCTACCGCCCCAGCCCGGCCCGACGCACCATGGCTCTCCCGGCGCAGCGCTGGACCAAGGGGAGGGGCGGCAATGAACGTCCGTCGTGTGGAGCGCAAGCTCTGCAACAGGGCTCTGGGTGGGTGTGCAGTCAGACGTGCGGCTGGTCATGCGTCGCCCCGCTGCCCACCGCGCCGGTAGCCTCACCGTATGAGTAGGCCGCCAGAGATCACCCGCACCGAGTGCCGGCAGTGCGGTACCGAGATCTACGGGGTGAACGGCCGCTACTCCTGCACCGTGTGCGGCTGGGTCAACCCCTGGTACGAGGGGCACGGCGAGCTGCCCACTGCCAAGGACGACCCTGACTACCCGCGTCGTAGAAACGCCCGCTGAGTTACAGCAGGCCGAGGTCCGTGTCCGGTCGGCACATGCTGCACGCCTCCACGTCGAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [21.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 6840505-6840234 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVQE020000001.1 Streptomyces sp. BRB081 Scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6840504 29 100.0 32 ............................. GCCGGAGAGATCGCGCGGGTCACTACGCAGGG 6840443 29 100.0 32 ............................. GTCCCGTGCACGTGCGGAGCACGGACGACGTA 6840382 29 96.6 32 ............................C ACGCCTCCGTCGCAGGCTGGCGCCCCTGCCTC 6840321 29 100.0 32 ............................. CTCCGCACCGGCTTCACCCTGCCGAAGCCCTG 6840260 27 86.2 0 ............T.--..A.......... | ========== ====== ====== ====== ============================= ================================ ================== 5 29 96.6 32 GGGCAGCCCACGCGGGTGGGGGTACGACG # Left flank : GTTGACCAGGCCCCCCGCCAGATGGGGCCGTCCGCCGTACCTGTCCTTCGGCGAAGCGCTGGACATCGAGGAAATTGCCCCGGCCGCACGTGTGCGACAAGTCGAACCAGACGGCCACAGCATCGCCGAAAAAGTTCTAGGCTCCCAGAACCGAGCGACCACAACCGTCGATGCGGACACTGAACGTCCTCGCGATGCAAAGCACCAGCTCGCAAAGGGGGCAACCCACGCGCGTGGGGGTACGGACCTGCTCCAGCGGCCGCGATGTCCAAGGGATCGATGGACAACCTGGTACCTGTGGGCTCATCTCGTCACCGGGTGGAAGGATGAGCAAAAGTTGGCCCGGCCACACACGCGCCTGCACGAGCCGAACCCAGGACAACACCCGCAGCATCGCCGAAGACGTTCTAGGCTCTCAGAGGCAAGCAACGACAGCTGGCAATGCGGACACAACGCGGACACTGAACGTCCTCGCGATGCAAAGCACCAGCTCGCGAAGG # Right flank : ACGTGCGACAGGTAGGCGAGGTTGCGTCGGTGGTGGGTGAAGAGCCCACGATGCTGAAAGGTGCTCTGCGCCCGGTTGGGGGACAGCCCACACTCACGGAGGTTGGCCAGCAGGCGAGGCACAACAACTCCACGCTCGTGGAGGCAACGCTGGCCACTGCTCGCCGCGGAACTAGAGGTACAAGGCAACCCTCATACGCAAGAACACGCCATTGGAAGTTGCATCTCGACTTCGCGGGAGATTCGCATCAACCTTTCGCGGCCACGCCATCGGAACCGAGTAAAACAGCAGGTCACCATACAGATGGCGCGAAATCTCAACGCAATAAATCACGAAGATCTAATGCGACTCTCCAGGTGGGGCCACGTCGGGCCGGGCGGTCGTGAGCCGAAGCACGATGGTTGTCACCAAGGCGGGCGTGCTGTCACCAGGGCCACCGGACGGTAAGTGCCCGAGTGGAGTTCTGGACCGCTGCGCAGTCTCAGTTGTCCAGGGGTTTC # Questionable array : NO Score: 2.89 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCAGCCCACGCGGGTGGGGGTACGACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.10,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //