Array 1 23986-22037 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHBR010000010.1 Psychrobacter urativorans isolate Psychrobacter urativorans ACAM534, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================================================================== ================== 23985 28 96.4 32 ....................C....... TGTTAATAGTGGTAGTAAATATAGATCACTTA 23925 28 96.4 32 ....................C....... ATTAGCTGAAAATATACCAGTGTTAGCTAAAA 23865 28 96.4 32 ....................C....... TATCGTCAAAAATCACAACAGGCTCTACGCTA 23805 28 96.4 32 ....................C....... ATTTTAATGACTGCTCACGATTCATGCCCATT 23745 28 96.4 32 ....................C....... TTACGACATCAACGACTCGCATTGAGCGTTCT 23685 28 96.4 32 ....................C....... GCTAAAGATAATTAAGTATTTCAAGAGGTTTG 23625 28 96.4 32 ....................C....... ACTACTGATGCAAACAAAAACGTCACTCTAAA 23565 28 96.4 32 ....................C....... AACAACACCTGCACTATTAGCTGACACATTAT 23505 28 96.4 32 ....................C....... AATTGAAAGATGCTGTAACCGCCTTTACAGGC 23445 28 92.9 32 ......T.............C....... TAATGCTTCACGTAAGATATTATCAGCATTGG 23385 28 96.4 32 ....................C....... GCTACAAGGTAGGGCATATAGAAGCTTTAGCT 23325 28 96.4 32 ....................C....... AACAGCATCACAGAGCTGGGACAAAACGAAAC 23265 28 100.0 31 ............................ GTATCTTGAGTTTTGCCATGTTAGTGCTCTA 23206 28 100.0 32 ............................ AATGCAGTGAATGCTGATGACGCGGTGAACTT 23146 28 100.0 32 ............................ TGTCCATACTATGATCACTCTTAATTTCTTTC 23086 28 100.0 32 ............................ CTGTTGAGACAGAAAAGAATATTAATATTAAT 23026 28 100.0 32 ............................ TTATACAGGGGCATGGCAAAGAAACGAAGAAA 22966 28 100.0 32 ............................ TTGATCCCTTGCTGAGTAGGCTCTGCTTCTAT 22906 28 100.0 32 ............................ TTTGACTGTGTACACATCCCATAGCTCATACA 22846 28 100.0 32 ............................ ATTCGTCGGTAAGGTTGTAGCAGATGATAAGC 22786 28 100.0 32 ............................ ACAAACGATGTGGCAGGCTCACCGAATAACAG 22726 28 100.0 32 ............................ GTCATAAGAATGTTTACTGCCGTACTTGCTAT 22666 28 100.0 32 ............................ GTAGCTGCTAGAGATCTTGTATTAACACAATC 22606 28 96.4 32 .....A...................... TTTATTGGTTAATTCGCACCAAATCTTTATCT 22546 28 100.0 32 ............................ AGTAGCGGGCGACTCAATATTTACGCTTATGC 22486 28 89.3 32 ............TC......C....... ATCGATTATATCTGCGGCCTATCGTGCGAACC 22426 28 89.3 32 ............TC......C....... CGATACAGATACTTGAAGCAGTTACCACCACA 22366 28 92.9 32 ............TC.............. ATACCAGCACTGATACTAGTACCTGCTGTCAC 22306 28 100.0 32 ............................ TCATTAGACCCAATTGCGCTTGATTCAGCACC 22246 28 89.3 32 ............TC......C....... AAGACACTGAGACATTCATGCTAGAGTGGATT 22186 28 82.1 91 ............TC......C.....GC CGCGTTAAAAAATTGCATGCCAATTTTAGTGGCGCAAGGAAAATTCTTTAAATAGAATTTTCAGAAGTTATGCTCATGTTCAAATGCTAAT T [22160] 22066 28 85.7 0 A..G.......T........C....... | A,G [22059,22062] ========== ====== ====== ====== ============================ =========================================================================================== ================== 32 28 96.2 34 CTTCATCACCGCATAGGTGATTTAGAAA # Left flank : TATTTGAGACGATAGGTCAATGTTTTGCTTATTTAGATGATGTGCTATGCGAATACTGTGGCTATATTTGTCCTTTAGAGGTACCAGCAGACATTCCTTATATGCGCTCAAAACAGAGCTGGTGTTGTGAGGTATGTGAGCACGCCGCATGGCGTGAGCATAACAACCGATAATTTTTTTAAATATTTAAAGCCAAACAGCCTAGGTTGTTTGGCTTTTTATTTTTTGACGACATCCGTTGTCGTAAAGACTTTTATATATATTGTTTTACCAACATAGTTCGGTTAAAGTAAATTGGTATTAAACTCTACAATAACTCCAATGGACGGAACTACTATGGCAAAACCTAGCAACGCCTATACTGACAATAGTTTCGCGTCCTCTGATCTAAAGACTATTTTGCACTCCAAACGTGCCAATATCTACTACCTTTCTCATTGTAGGGTAATGCAAAAAGTGACTTAGAAATACAATTATAACCCCCATCAAACCCATTGCTA # Right flank : ATCGAATGAGAGTATCAATCTGGTAGGCAGTACATAGATTGCACTTAGCCAATTGCATCCCTCATCCTAAACGACTTCTCTGCTTACGATGCCCGTCCGAATCCCTACCAACTCTAGTTAACTCCTGAAGCACTTCAAAGATGATTATCATAAACTTTTGTCTACATAGCCTTAAAAATATGATCTGGCGTCACGTACTGTCGTGTATTTCATGACTTTGGTTCAATTCTTAGTAAAGTGGGTTTTAATTGTTAGCCACTCATCGTAAGGTATGAGTAGAGGTCAATGAACGAGGCGTATCGACCAATTAACCAACTCGTTATCTTAGTGGGAAGTACAATATGAAATCACTGTCGATCGCCAAACTACAGACAACACCAGTTCTTATTTATCCAGACATTATTGACTTGTTTGATATTTATACCTATCACATTAGACCATTTATCAATGATGAAGCTTTAAGGTATGAACAGAGCGTTGCCTGCTCTAGAACCTCATCC # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.13, 8:1, 9:0.58, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCATCACCGCATAGGTGATTTAGAAA # Alternate repeat : CTTCATCACCGCATAGGTGACTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //